RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 TMEM256-PLSCR3K7ERE1 68 aa6.47□□□□□ -1.37
PDLIM5-217ENST00000512274 K7ERU9 68 aa6.47□□□□□ -1.37
PDLIM5-217ENST00000512274 BAALC-AS2P0C853 105 aa6.47□□□□□ -1.37
PDLIM5-217ENST00000512274 LORP23490 312 aaPredicted RBP6.47□□□□□ -1.37
PDLIM5-217ENST00000512274 REG3GQ6UW15 175 aa6.47□□□□□ -1.37
PDLIM5-217ENST00000512274 OBSCN-AS1Q96MR7 158 aa6.47□□□□□ -1.37
PDLIM5-217ENST00000512274 C21orf62-AS1Q17RA5 79 aa6.45□□□□□ -1.38
PDLIM5-217ENST00000512274 MTURNQ8N3F0 131 aa6.45□□□□□ -1.38
PDLIM5-217ENST00000512274 ETDCA0A1B0GVM5 59 aa6.44□□□□□ -1.38
PDLIM5-217ENST00000512274 JMJD7-PLA2G4BH0Y9G9 81 aa6.44□□□□□ -1.38
PDLIM5-217ENST00000512274 IGLV5-48A0A075B6I7 105 aa6.43□□□□□ -1.38
PDLIM5-217ENST00000512274 A0A0U1RQV1 116 aa6.43□□□□□ -1.38
PDLIM5-217ENST00000512274 RPL37AP8A6NKH3 93 aa6.43□□□□□ -1.38
PDLIM5-217ENST00000512274 Q6ZQY7 126 aa6.43□□□□□ -1.38
PDLIM5-217ENST00000512274 FAM240AA0A1B0GVK7 77 aa6.42□□□□□ -1.38
PDLIM5-217ENST00000512274 PHF5AQ7RTV0 110 aaKnown RBP6.42□□□□□ -1.38
PDLIM5-217ENST00000512274 KRTAP13-1Q8IUC0 172 aa6.42□□□□□ -1.38
PDLIM5-217ENST00000512274 Q9BRP9 147 aa6.42□□□□□ -1.38
PDLIM5-217ENST00000512274 BCE1O60756 84 aa6.41□□□□□ -1.38
PDLIM5-217ENST00000512274 TEX49A0A1B0GTD5 131 aa6.4□□□□□ -1.38
PDLIM5-217ENST00000512274 UBE2BP63146 152 aa6.4□□□□□ -1.38
PDLIM5-217ENST00000512274 LPAP08519 4548 aa6.39□□□□□ -1.39
PDLIM5-217ENST00000512274 PDE6GP18545 87 aa6.39□□□□□ -1.39
PDLIM5-217ENST00000512274 LINC01547P58512 204 aaPredicted RBP6.39□□□□□ -1.39
PDLIM5-217ENST00000512274 KRTAP10-8P60410 259 aa6.39□□□□□ -1.39
PDLIM5-217ENST00000512274 SMCR5Q8TEV8 140 aa6.39□□□□□ -1.39
PDLIM5-217ENST00000512274 SPRR1BP22528 89 aa6.38□□□□□ -1.39
PDLIM5-217ENST00000512274 XP32Q5T750 250 aa6.38□□□□□ -1.39
PDLIM5-217ENST00000512274 KRTAP11-1Q8IUC1 163 aa6.38□□□□□ -1.39
PDLIM5-217ENST00000512274 DPH3Q96FX2 82 aa6.38□□□□□ -1.39
PDLIM5-217ENST00000512274 LOC110117498A0A087WWA1 95 aa6.37□□□□□ -1.39
PDLIM5-217ENST00000512274 ACYP1P07311 99 aa6.37□□□□□ -1.39
PDLIM5-217ENST00000512274 FAM19A1Q7Z5A9 133 aa6.36□□□□□ -1.39
PDLIM5-217ENST00000512274 Q8N377 158 aa6.35□□□□□ -1.39
PDLIM5-217ENST00000512274 TRBV7-4A0A0J9YYF1 115 aa6.34□□□□□ -1.39
PDLIM5-217ENST00000512274 A0A1B0GW54 56 aa6.34□□□□□ -1.39
PDLIM5-217ENST00000512274 NDUFV3P56181 108 aaKnown RBP6.34□□□□□ -1.39
PDLIM5-217ENST00000512274 RBM3P98179 157 aaKnown RBP6.34□□□□□ -1.39
PDLIM5-217ENST00000512274 PSORS1C2Q9UIG4 136 aa6.34□□□□□ -1.39
PDLIM5-217ENST00000512274 IGLV8-61A0A075B6I0 122 aa6.33□□□□□ -1.4
PDLIM5-217ENST00000512274 ERC2-IT1O76042 136 aa6.33□□□□□ -1.4
PDLIM5-217ENST00000512274 CRCT1Q9UGL9 99 aa6.33□□□□□ -1.4
PDLIM5-217ENST00000512274 ZNF861PO60384 105 aa6.32□□□□□ -1.4
PDLIM5-217ENST00000512274 CCKP06307 115 aa6.32□□□□□ -1.4
PDLIM5-217ENST00000512274 UBE2AP49459 152 aa6.32□□□□□ -1.4
PDLIM5-217ENST00000512274 PRLHP81277 87 aa6.32□□□□□ -1.4
PDLIM5-217ENST00000512274 KRTAP4-8Q9BYQ9 185 aa6.32□□□□□ -1.4
PDLIM5-217ENST00000512274 LAMTOR3Q9UHA4 124 aa6.32□□□□□ -1.4
PDLIM5-217ENST00000512274 LINC00483Q53H64 154 aa6.31□□□□□ -1.4
PDLIM5-217ENST00000512274 Q6ZQT0 140 aa6.31□□□□□ -1.4
PDLIM5-217ENST00000512274 ZNF706Q9Y5V0 76 aaPredicted RBP6.31□□□□□ -1.4
PDLIM5-217ENST00000512274 FAT4Q6V0I7 4981 aa6.31□□□□□ -1.4
PDLIM5-217ENST00000512274 SMIM29Q86T20 159 aa6.3□□□□□ -1.4
PDLIM5-217ENST00000512274 DSCR8Q96T75 97 aa6.3□□□□□ -1.4
PDLIM5-217ENST00000512274 HIGD2AQ9BW72 106 aa6.3□□□□□ -1.4
PDLIM5-217ENST00000512274 C14orf132Q9NPU4 83 aa6.3□□□□□ -1.4
PDLIM5-217ENST00000512274 IGLV7-43P04211 117 aa6.29□□□□□ -1.4
PDLIM5-217ENST00000512274 ST20-AS1Q8NBB2 130 aa6.29□□□□□ -1.4
PDLIM5-217ENST00000512274 C1orf137Q5JT78 98 aa6.28□□□□□ -1.4
PDLIM5-217ENST00000512274 CDIP1Q9H305 208 aa6.28□□□□□ -1.4
PDLIM5-217ENST00000512274 SPRR4Q96PI1 79 aa6.27□□□□□ -1.41
PDLIM5-217ENST00000512274 Q6JHZ5 121 aa6.26□□□□□ -1.41
PDLIM5-217ENST00000512274 SPINK6Q6UWN8 80 aa6.26□□□□□ -1.41
PDLIM5-217ENST00000512274 F8WEM9 126 aa6.25□□□□□ -1.41
PDLIM5-217ENST00000512274 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.24□□□□□ -1.41
PDLIM5-217ENST00000512274 PRR4Q16378 134 aa6.24□□□□□ -1.41
PDLIM5-217ENST00000512274 GAGE2AQ6NT46 116 aa6.24□□□□□ -1.41
PDLIM5-217ENST00000512274 Q6Q795 121 aa6.24□□□□□ -1.41
PDLIM5-217ENST00000512274 DEFB105AQ8NG35 78 aa6.24□□□□□ -1.41
PDLIM5-217ENST00000512274 VPS25Q9BRG1 176 aa6.24□□□□□ -1.41
PDLIM5-217ENST00000512274 MUC2Q02817 5179 aa6.23□□□□□ -1.41
PDLIM5-217ENST00000512274 LINC00643Q86TS7 51 aa6.23□□□□□ -1.41
PDLIM5-217ENST00000512274 Q8NBF4 154 aa6.22□□□□□ -1.41
PDLIM5-217ENST00000512274 CRYGAP11844 174 aa6.21□□□□□ -1.42
PDLIM5-217ENST00000512274 ATP5EP2Q5VTU8 51 aa6.21□□□□□ -1.42
PDLIM5-217ENST00000512274 C3orf22Q8N5N4 141 aa6.21□□□□□ -1.42
PDLIM5-217ENST00000512274 LINC00846Q9NV44 126 aa6.21□□□□□ -1.42
PDLIM5-217ENST00000512274 FAM229BQ4G0N7 80 aa6.2□□□□□ -1.42
PDLIM5-217ENST00000512274 SIGMAR1Q99720 223 aa6.2□□□□□ -1.42
PDLIM5-217ENST00000512274 IMUPQ9GZP8 106 aa6.2□□□□□ -1.42
PDLIM5-217ENST00000512274 TRBV7-7A0A0K0K1E9 115 aa6.19□□□□□ -1.42
PDLIM5-217ENST00000512274 A0A1W2PNM2 257 aa6.19□□□□□ -1.42
PDLIM5-217ENST00000512274 IGFL1Q6UW32 110 aa6.19□□□□□ -1.42
PDLIM5-217ENST00000512274 UBL5Q9BZL1 73 aa6.19□□□□□ -1.42
PDLIM5-217ENST00000512274 PRR26Q8N8Z3 221 aa6.17□□□□□ -1.42
PDLIM5-217ENST00000512274 A0A1B0GV72 72 aa6.15□□□□□ -1.42
PDLIM5-217ENST00000512274 SCGB1A1P11684 91 aa6.15□□□□□ -1.42
PDLIM5-217ENST00000512274 CD164Q04900 197 aa6.15□□□□□ -1.42
PDLIM5-217ENST00000512274 SSBP3-AS1Q7Z2R9 100 aa6.15□□□□□ -1.42
PDLIM5-217ENST00000512274 CXCL6P80162 114 aa6.14□□□□□ -1.43
PDLIM5-217ENST00000512274 Q6ZVQ6 151 aa6.14□□□□□ -1.43
PDLIM5-217ENST00000512274 MT-ATP8P03928 68 aa6.13□□□□□ -1.43
PDLIM5-217ENST00000512274 KRTAP1-4P0C5Y4 121 aa6.13□□□□□ -1.43
PDLIM5-217ENST00000512274 NREPQ16612 68 aa6.1□□□□□ -1.43
PDLIM5-217ENST00000512274 FSIP2Q5CZC0 6907 aa6.1□□□□□ -1.43
PDLIM5-217ENST00000512274 Q5XG85 94 aa6.09□□□□□ -1.43
PDLIM5-217ENST00000512274 SS18L2Q9UHA2 77 aa6.09□□□□□ -1.43
PDLIM5-217ENST00000512274 MOBPQ13875 183 aa6.08□□□□□ -1.44
PDLIM5-217ENST00000512274 C9orf153Q5TBE3 101 aa6.08□□□□□ -1.44
PDLIM5-217ENST00000512274 IGLV9-49A0A0B4J1Y8 123 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms