RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 CFC1P0CG37 223 aa7.31□□□□□ -1.24
RNF4-215ENST00000511843 HIGD1BQ9P298 99 aa7.29□□□□□ -1.24
RNF4-215ENST00000511843 F8WEM9 126 aa7.28□□□□□ -1.24
RNF4-215ENST00000511843 SEC61BP60468 96 aaKnown RBP7.28□□□□□ -1.24
RNF4-215ENST00000511843 C1orf195Q5TG92 126 aa7.28□□□□□ -1.24
RNF4-215ENST00000511843 RAB37Q96AX2 223 aa7.28□□□□□ -1.24
RNF4-215ENST00000511843 BVES-AS1Q5T3Y7 98 aa7.27□□□□□ -1.25
RNF4-215ENST00000511843 LCE2AQ5TA79 106 aaPredicted RBP7.27□□□□□ -1.25
RNF4-215ENST00000511843 PYY3Q5JQD4 70 aa7.25□□□□□ -1.25
RNF4-215ENST00000511843 Q5XG85 94 aa7.25□□□□□ -1.25
RNF4-215ENST00000511843 IGFL1Q6UW32 110 aa7.25□□□□□ -1.25
RNF4-215ENST00000511843 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.25□□□□□ -1.25
RNF4-215ENST00000511843 TMA7Q9Y2S6 64 aaKnown RBP7.25□□□□□ -1.25
RNF4-215ENST00000511843 A0A0B4J2C4 111 aa7.24□□□□□ -1.25
RNF4-215ENST00000511843 CEND1Q8N111 149 aa7.24□□□□□ -1.25
RNF4-215ENST00000511843 FAM218AQ96MZ4 157 aa7.24□□□□□ -1.25
RNF4-215ENST00000511843 H3BUT2 72 aa7.23□□□□□ -1.25
RNF4-215ENST00000511843 FXYD2P54710 66 aa7.23□□□□□ -1.25
RNF4-215ENST00000511843 OCIAD2Q56VL3 154 aa7.23□□□□□ -1.25
RNF4-215ENST00000511843 IGLV8-61A0A075B6I0 122 aa7.22□□□□□ -1.25
RNF4-215ENST00000511843 CLEC2BQ92478 149 aa7.22□□□□□ -1.25
RNF4-215ENST00000511843 PCOTHQ58A44 107 aa7.21□□□□□ -1.26
RNF4-215ENST00000511843 Q6JHZ5 121 aa7.21□□□□□ -1.26
RNF4-215ENST00000511843 SNHG12Q9BXW3 62 aa7.21□□□□□ -1.26
RNF4-215ENST00000511843 TCL1BO95988 128 aa7.2□□□□□ -1.26
RNF4-215ENST00000511843 PRO1854Q9UHT4 67 aa7.2□□□□□ -1.26
RNF4-215ENST00000511843 TRBV7-7A0A0K0K1E9 115 aa7.19□□□□□ -1.26
RNF4-215ENST00000511843 PPDPFLQ8WWR9 84 aa7.19□□□□□ -1.26
RNF4-215ENST00000511843 TMEM238LA0A1B0GVL6 79 aa7.18□□□□□ -1.26
RNF4-215ENST00000511843 A6NJY4 79 aa7.18□□□□□ -1.26
RNF4-215ENST00000511843 H0YGX0 51 aa7.18□□□□□ -1.26
RNF4-215ENST00000511843 K7ERJ3 54 aa7.18□□□□□ -1.26
RNF4-215ENST00000511843 TRIAP1O43715 76 aa7.17□□□□□ -1.26
RNF4-215ENST00000511843 NDUFV3P56181 108 aaKnown RBP7.15□□□□□ -1.26
RNF4-215ENST00000511843 HSD52Q0P140 79 aa7.15□□□□□ -1.26
RNF4-215ENST00000511843 SNCGO76070 127 aa7.14□□□□□ -1.27
RNF4-215ENST00000511843 FABP2P12104 132 aa7.12□□□□□ -1.27
RNF4-215ENST00000511843 PSMB2P49721 201 aa7.11□□□□□ -1.27
RNF4-215ENST00000511843 RPL37P61927 97 aaKnown RBP7.11□□□□□ -1.27
RNF4-215ENST00000511843 A0A1B0GV72 72 aa7.1□□□□□ -1.27
RNF4-215ENST00000511843 A0A1B0GX51 115 aa7.1□□□□□ -1.27
RNF4-215ENST00000511843 H3BMG7 143 aa7.1□□□□□ -1.27
RNF4-215ENST00000511843 LCE2CQ5TA81 110 aa7.1□□□□□ -1.27
RNF4-215ENST00000511843 UQCR10Q9UDW1 63 aa7.1□□□□□ -1.27
RNF4-215ENST00000511843 KRTAP19-2Q3LHN2 52 aa7.09□□□□□ -1.27
RNF4-215ENST00000511843 LST1O00453 97 aa7.08□□□□□ -1.28
RNF4-215ENST00000511843 OBSCN-AS1Q96MR7 158 aa7.08□□□□□ -1.28
RNF4-215ENST00000511843 KRTAP9-2Q9BYQ4 174 aa7.08□□□□□ -1.28
RNF4-215ENST00000511843 A0A087WSZ3 146 aa7.07□□□□□ -1.28
RNF4-215ENST00000511843 LCE2DQ5TA82 110 aaPredicted RBP7.07□□□□□ -1.28
RNF4-215ENST00000511843 Q6Q795 121 aa7.07□□□□□ -1.28
RNF4-215ENST00000511843 TEN1Q86WV5 123 aa7.07□□□□□ -1.28
RNF4-215ENST00000511843 A0A1W2PNM2 257 aa7.05□□□□□ -1.28
RNF4-215ENST00000511843 DNAL4O96015 105 aa7.05□□□□□ -1.28
RNF4-215ENST00000511843 ORMDL1Q9P0S3 153 aa7.04□□□□□ -1.28
RNF4-215ENST00000511843 SS18L2Q9UHA2 77 aa7.04□□□□□ -1.28
RNF4-215ENST00000511843 GHRHP01286 108 aa7.03□□□□□ -1.28
RNF4-215ENST00000511843 Q96NJ1 140 aa7.03□□□□□ -1.28
RNF4-215ENST00000511843 COX6CP09669 75 aa7.02□□□□□ -1.29
RNF4-215ENST00000511843 MT1HP80294 61 aa7□□□□□ -1.29
RNF4-215ENST00000511843 ANKRD29Q8N6D5 301 aa7□□□□□ -1.29
RNF4-215ENST00000511843 SCGB1C2P0DMR2 95 aa6.99□□□□□ -1.29
RNF4-215ENST00000511843 TMEM256-PLSCR3K7ERE1 68 aa6.98□□□□□ -1.29
RNF4-215ENST00000511843 Q75L30 129 aa6.98□□□□□ -1.29
RNF4-215ENST00000511843 SIGMAR1Q99720 223 aa6.98□□□□□ -1.29
RNF4-215ENST00000511843 DSCR10P59022 87 aa6.97□□□□□ -1.29
RNF4-215ENST00000511843 NAA38Q9BRA0 125 aaKnown RBP6.97□□□□□ -1.29
RNF4-215ENST00000511843 TRBV7-4A0A0J9YYF1 115 aa6.96□□□□□ -1.3
RNF4-215ENST00000511843 ATP11AUNQ6ZP68 121 aa6.96□□□□□ -1.3
RNF4-215ENST00000511843 H3BQ85 93 aa6.95□□□□□ -1.3
RNF4-215ENST00000511843 TRACP01848 142 aa6.95□□□□□ -1.3
RNF4-215ENST00000511843 CCKP06307 115 aa6.95□□□□□ -1.3
RNF4-215ENST00000511843 DEFB116Q30KQ4 102 aa6.95□□□□□ -1.3
RNF4-215ENST00000511843 IGKV4-1P06312 121 aa6.94□□□□□ -1.3
RNF4-215ENST00000511843 UBE2V1Q13404 147 aa6.94□□□□□ -1.3
RNF4-215ENST00000511843 COX6B2Q6YFQ2 88 aa6.94□□□□□ -1.3
RNF4-215ENST00000511843 VPS25Q9BRG1 176 aa6.94□□□□□ -1.3
RNF4-215ENST00000511843 C20orf166-AS1Q96NR2 134 aa6.92□□□□□ -1.3
RNF4-215ENST00000511843 A8MUU9 505 aa6.91□□□□□ -1.3
RNF4-215ENST00000511843 M0R143 59 aa6.91□□□□□ -1.3
RNF4-215ENST00000511843 NOTCH2NLQ7Z3S9 236 aa6.91□□□□□ -1.3
RNF4-215ENST00000511843 BAALC-AS2P0C853 105 aa6.9□□□□□ -1.3
RNF4-215ENST00000511843 SMIM6P0DI80 62 aa6.9□□□□□ -1.3
RNF4-215ENST00000511843 RBM3P98179 157 aaKnown RBP6.89□□□□□ -1.31
RNF4-215ENST00000511843 LINC00472Q9H8W2 130 aa6.89□□□□□ -1.31
RNF4-215ENST00000511843 LINC00313P59037 77 aa6.88□□□□□ -1.31
RNF4-215ENST00000511843 KRTAP16-1A8MUX0 517 aa6.87□□□□□ -1.31
RNF4-215ENST00000511843 DSCR8Q96T75 97 aa6.87□□□□□ -1.31
RNF4-215ENST00000511843 FLGP20930 4061 aaPredicted RBP6.86□□□□□ -1.31
RNF4-215ENST00000511843 M0R2T5 61 aa6.86□□□□□ -1.31
RNF4-215ENST00000511843 IGHV6-1A0A0B4J1U7 121 aa6.85□□□□□ -1.31
RNF4-215ENST00000511843 KRTAP10-6P60371 365 aaPredicted RBP6.85□□□□□ -1.31
RNF4-215ENST00000511843 ATXN8Q156A1 80 aa6.85□□□□□ -1.31
RNF4-215ENST00000511843 BATFQ16520 125 aa6.85□□□□□ -1.31
RNF4-215ENST00000511843 LORP23490 312 aaPredicted RBP6.84□□□□□ -1.31
RNF4-215ENST00000511843 C9JAW5 83 aa6.83□□□□□ -1.32
RNF4-215ENST00000511843 FSIP2Q5CZC0 6907 aa6.82□□□□□ -1.32
RNF4-215ENST00000511843 KRTAP9-6A0A140TA67 174 aa6.82□□□□□ -1.32
RNF4-215ENST00000511843 TSTD3H0UI37 97 aa6.82□□□□□ -1.32
RNF4-215ENST00000511843 LOC105371267A0A1B0GV96 52 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms