RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 UBR4Q5T4S7 5183 aa-0.28□□□□□ -2.45
CHD1-207ENST00000511628 RB1CC1Q8TDY2 1594 aa-0.28□□□□□ -2.45
CHD1-207ENST00000511628 ABCC1P33527 1531 aa-0.28□□□□□ -2.45
CHD1-207ENST00000511628 RNF213Q63HN8 5207 aa-0.29□□□□□ -2.46
CHD1-207ENST00000511628 DOT1LQ8TEK3 1739 aa-0.29□□□□□ -2.46
CHD1-207ENST00000511628 H3BUT2 72 aa-0.29□□□□□ -2.46
CHD1-207ENST00000511628 MT1AP04731 61 aa-0.29□□□□□ -2.46
CHD1-207ENST00000511628 SMIM13P0DJ93 91 aa-0.29□□□□□ -2.46
CHD1-207ENST00000511628 NESP48681 1621 aa-0.29□□□□□ -2.46
CHD1-207ENST00000511628 ACACAQ13085 2346 aa-0.29□□□□□ -2.46
CHD1-207ENST00000511628 PLXNC1O60486 1568 aa-0.29□□□□□ -2.46
CHD1-207ENST00000511628 DIP2BQ9P265 1576 aa-0.29□□□□□ -2.46
CHD1-207ENST00000511628 AKAP13Q12802 2813 aa-0.29□□□□□ -2.46
CHD1-207ENST00000511628 CCDC18Q5T9S5 1454 aa-0.29□□□□□ -2.46
CHD1-207ENST00000511628 PKHD1P08F94 4074 aa-0.29□□□□□ -2.46
CHD1-207ENST00000511628 ARFGEF2Q9Y6D5 1785 aa-0.29□□□□□ -2.46
CHD1-207ENST00000511628 PRRC2CQ9Y520 2896 aaKnown RBP-0.3□□□□□ -2.46
CHD1-207ENST00000511628 MTORP42345 2549 aa-0.3□□□□□ -2.46
CHD1-207ENST00000511628 PIK3C2BO00750 1634 aa-0.3□□□□□ -2.46
CHD1-207ENST00000511628 TNRC18O15417 2968 aaPredicted RBP-0.3□□□□□ -2.46
CHD1-207ENST00000511628 MT4P47944 62 aa-0.3□□□□□ -2.46
CHD1-207ENST00000511628 PRLHP81277 87 aa-0.3□□□□□ -2.46
CHD1-207ENST00000511628 KRTAP19-8Q3LI54 63 aa-0.3□□□□□ -2.46
CHD1-207ENST00000511628 KRTAP20-2Q3LI61 65 aa-0.3□□□□□ -2.46
CHD1-207ENST00000511628 MED14O60244 1454 aa-0.3□□□□□ -2.46
CHD1-207ENST00000511628 ANKRD50Q9ULJ7 1429 aa-0.3□□□□□ -2.46
CHD1-207ENST00000511628 KIAA1109Q2LD37 5005 aa-0.31□□□□□ -2.46
CHD1-207ENST00000511628 SMARCA2P51531 1590 aa-0.31□□□□□ -2.46
CHD1-207ENST00000511628 HIVEP1P15822 2718 aa-0.31□□□□□ -2.46
CHD1-207ENST00000511628 FLGP20930 4061 aaPredicted RBP-0.31□□□□□ -2.46
CHD1-207ENST00000511628 BVES-AS1Q5T3Y7 98 aa-0.31□□□□□ -2.46
CHD1-207ENST00000511628 UBL5Q9BZL1 73 aa-0.31□□□□□ -2.46
CHD1-207ENST00000511628 THOC2Q8NI27 1593 aaKnown RBP-0.32□□□□□ -2.46
CHD1-207ENST00000511628 FAM186AA6NE01 2351 aa-0.32□□□□□ -2.46
CHD1-207ENST00000511628 H0YAA0 97 aa-0.32□□□□□ -2.46
CHD1-207ENST00000511628 C18orf32Q8TCD1 76 aa-0.32□□□□□ -2.46
CHD1-207ENST00000511628 DSPP15924 2871 aaKnown RBP-0.32□□□□□ -2.46
CHD1-207ENST00000511628 PKD1L2Q7Z442 2459 aa-0.32□□□□□ -2.46
CHD1-207ENST00000511628 ZZEF1O43149 2961 aa-0.33□□□□□ -2.46
CHD1-207ENST00000511628 TACC2O95359 2948 aa-0.33□□□□□ -2.46
CHD1-207ENST00000511628 FASNP49327 2511 aaKnown RBP-0.33□□□□□ -2.46
CHD1-207ENST00000511628 ERVK-7P63135 1459 aa-0.33□□□□□ -2.46
CHD1-207ENST00000511628 DEFB130BP0DP73 79 aa-0.33□□□□□ -2.46
CHD1-207ENST00000511628 DEFB130AP0DP74 79 aa-0.33□□□□□ -2.46
CHD1-207ENST00000511628 IAPPP10997 89 aa-0.33□□□□□ -2.46
CHD1-207ENST00000511628 DEFA5Q01523 94 aa-0.33□□□□□ -2.46
CHD1-207ENST00000511628 SPRR2FQ96RM1 72 aa-0.33□□□□□ -2.46
CHD1-207ENST00000511628 KCNQ1DNQ9H478 68 aa-0.33□□□□□ -2.46
CHD1-207ENST00000511628 HFM1A2PYH4 1435 aa-0.33□□□□□ -2.46
CHD1-207ENST00000511628 ANKARQ7Z5J8 1434 aa-0.33□□□□□ -2.46
CHD1-207ENST00000511628 PKD1P98161 4303 aa-0.33□□□□□ -2.46
CHD1-207ENST00000511628 EPPK1P58107 5090 aaKnown RBP-0.33□□□□□ -2.46
CHD1-207ENST00000511628 ABCA13Q86UQ4 5058 aa-0.33□□□□□ -2.46
CHD1-207ENST00000511628 KDM5DQ9BY66 1539 aa-0.33□□□□□ -2.46
CHD1-207ENST00000511628 DCAF1Q9Y4B6 1507 aa-0.33□□□□□ -2.46
CHD1-207ENST00000511628 HTTP42858 3142 aa-0.33□□□□□ -2.46
CHD1-207ENST00000511628 RALGAPBQ86X10 1494 aa-0.34□□□□□ -2.46
CHD1-207ENST00000511628 DDX60LQ5H9U9 1706 aaKnown RBP-0.34□□□□□ -2.46
CHD1-207ENST00000511628 TEP1Q99973 2627 aaKnown RBP-0.34□□□□□ -2.46
CHD1-207ENST00000511628 LRRK2Q5S007 2527 aa-0.35□□□□□ -2.47
CHD1-207ENST00000511628 ZNF831Q5JPB2 1677 aa-0.36□□□□□ -2.47
CHD1-207ENST00000511628 DNAH9Q9NYC9 4486 aa-0.36□□□□□ -2.47
CHD1-207ENST00000511628 HERC1Q15751 4861 aa-0.36□□□□□ -2.47
CHD1-207ENST00000511628 CFAP74Q9C0B2 1584 aa-0.36□□□□□ -2.47
CHD1-207ENST00000511628 CEP290O15078 2479 aa-0.37□□□□□ -2.47
CHD1-207ENST00000511628 SCN11AQ9UI33 1791 aa-0.37□□□□□ -2.47
CHD1-207ENST00000511628 MAP3K1Q13233 1512 aa-0.37□□□□□ -2.47
CHD1-207ENST00000511628 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.37□□□□□ -2.47
CHD1-207ENST00000511628 DMXL1Q9Y485 3027 aa-0.37□□□□□ -2.47
CHD1-207ENST00000511628 ARHGAP35Q9NRY4 1499 aa-0.37□□□□□ -2.47
CHD1-207ENST00000511628 ANKRD11Q6UB99 2663 aaPredicted RBP-0.37□□□□□ -2.47
CHD1-207ENST00000511628 DNAH6Q9C0G6 4158 aa-0.37□□□□□ -2.47
CHD1-207ENST00000511628 CFAP43Q8NDM7 1665 aa-0.37□□□□□ -2.47
CHD1-207ENST00000511628 ETDCA0A1B0GVM5 59 aa-0.38□□□□□ -2.47
CHD1-207ENST00000511628 H3BVH4 76 aa-0.38□□□□□ -2.47
CHD1-207ENST00000511628 ENHOQ6UWT2 76 aa-0.38□□□□□ -2.47
CHD1-207ENST00000511628 S4R3F8 94 aa-0.38□□□□□ -2.47
CHD1-207ENST00000511628 PLCH1Q4KWH8 1693 aa-0.38□□□□□ -2.47
CHD1-207ENST00000511628 MYO18BQ8IUG5 2567 aa-0.38□□□□□ -2.47
CHD1-207ENST00000511628 HYDINQ4G0P3 5121 aa-0.38□□□□□ -2.47
CHD1-207ENST00000511628 ITSN1Q15811 1721 aa-0.38□□□□□ -2.47
CHD1-207ENST00000511628 FAT1Q14517 4588 aa-0.38□□□□□ -2.47
CHD1-207ENST00000511628 RRBP1Q9P2E9 1410 aaKnown RBP-0.38□□□□□ -2.47
CHD1-207ENST00000511628 CD163L1Q9NR16 1453 aa-0.39□□□□□ -2.47
CHD1-207ENST00000511628 LAMA1P25391 3075 aa-0.39□□□□□ -2.47
CHD1-207ENST00000511628 CRIP1P50238 77 aa-0.39□□□□□ -2.47
CHD1-207ENST00000511628 DEFB114Q30KQ6 69 aa-0.39□□□□□ -2.47
CHD1-207ENST00000511628 DEFB106AQ8N104 65 aa-0.39□□□□□ -2.47
CHD1-207ENST00000511628 VPS13DQ5THJ4 4388 aa-0.39□□□□□ -2.47
CHD1-207ENST00000511628 CCDC168Q8NDH2 2452 aa-0.39□□□□□ -2.47
CHD1-207ENST00000511628 BPTFQ12830 3046 aa-0.39□□□□□ -2.47
CHD1-207ENST00000511628 FAT3Q8TDW7 4589 aa-0.39□□□□□ -2.47
CHD1-207ENST00000511628 KIAA0586Q9BVV6 1533 aa-0.39□□□□□ -2.47
CHD1-207ENST00000511628 CUBNO60494 3623 aa-0.39□□□□□ -2.47
CHD1-207ENST00000511628 LAMA5O15230 3695 aa-0.4□□□□□ -2.47
CHD1-207ENST00000511628 NBEAQ8NFP9 2946 aa-0.4□□□□□ -2.47
CHD1-207ENST00000511628 MGAM2Q2M2H8 2515 aa-0.4□□□□□ -2.47
CHD1-207ENST00000511628 RICTORQ6R327 1708 aa-0.4□□□□□ -2.47
CHD1-207ENST00000511628 UTP20O75691 2785 aaKnown RBP-0.4□□□□□ -2.47
CHD1-207ENST00000511628 H3BUA1 57 aa-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms