RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 IGHV1-24A0A0C4DH33 117 aa1.4□□□□□ -2.19
TOPBP1-208ENST00000511439 ZNF727A8MUV8 499 aa1.4□□□□□ -2.19
TOPBP1-208ENST00000511439 TRACP01848 142 aa1.4□□□□□ -2.19
TOPBP1-208ENST00000511439 TCRAP04437 139 aa1.4□□□□□ -2.19
TOPBP1-208ENST00000511439 IL5P05113 134 aa1.4□□□□□ -2.19
TOPBP1-208ENST00000511439 AKR1D1P51857 326 aa1.4□□□□□ -2.19
TOPBP1-208ENST00000511439 PDE6HQ13956 83 aa1.4□□□□□ -2.19
TOPBP1-208ENST00000511439 IQCJQ1A5X6 159 aa1.4□□□□□ -2.19
TOPBP1-208ENST00000511439 SFT2D1Q8WV19 159 aa1.4□□□□□ -2.19
TOPBP1-208ENST00000511439 CLEC2BQ92478 149 aa1.4□□□□□ -2.19
TOPBP1-208ENST00000511439 TRBV6-1A0A0K0K1D8 114 aa1.39□□□□□ -2.19
TOPBP1-208ENST00000511439 CCDC160A6NGH7 325 aa1.39□□□□□ -2.19
TOPBP1-208ENST00000511439 H3BQ15 152 aa1.39□□□□□ -2.19
TOPBP1-208ENST00000511439 K7ERU9 68 aa1.39□□□□□ -2.19
TOPBP1-208ENST00000511439 IGLC6P0CF74 106 aa1.39□□□□□ -2.19
TOPBP1-208ENST00000511439 Q1T7F1 81 aa1.39□□□□□ -2.19
TOPBP1-208ENST00000511439 TMEM91Q6ZNR0 172 aa1.39□□□□□ -2.19
TOPBP1-208ENST00000511439 CYP2G1PQ6ZSU1 146 aa1.39□□□□□ -2.19
TOPBP1-208ENST00000511439 TP53RKQ96S44 253 aa1.39□□□□□ -2.19
TOPBP1-208ENST00000511439 FXYD6Q9H0Q3 95 aa1.39□□□□□ -2.19
TOPBP1-208ENST00000511439 ERC2-IT1O76042 136 aa1.38□□□□□ -2.19
TOPBP1-208ENST00000511439 RRAS2P62070 204 aaPredicted RBP1.38□□□□□ -2.19
TOPBP1-208ENST00000511439 Q5VV11 94 aa1.38□□□□□ -2.19
TOPBP1-208ENST00000511439 TEN1Q86WV5 123 aa1.38□□□□□ -2.19
TOPBP1-208ENST00000511439 ATOH7Q8N100 152 aa1.38□□□□□ -2.19
TOPBP1-208ENST00000511439 RAB37Q96AX2 223 aa1.38□□□□□ -2.19
TOPBP1-208ENST00000511439 C2orf88Q9BSF0 95 aa1.38□□□□□ -2.19
TOPBP1-208ENST00000511439 TMEM191AQ9H0A3 160 aa1.38□□□□□ -2.19
TOPBP1-208ENST00000511439 ATG5Q9H1Y0 275 aa1.38□□□□□ -2.19
TOPBP1-208ENST00000511439 NIT2Q9NQR4 276 aa1.38□□□□□ -2.19
TOPBP1-208ENST00000511439 TNFSF18Q9UNG2 199 aa1.38□□□□□ -2.19
TOPBP1-208ENST00000511439 LENEPQ9Y5L5 61 aa1.38□□□□□ -2.19
TOPBP1-208ENST00000511439 DLEU1O43261 78 aa1.37□□□□□ -2.19
TOPBP1-208ENST00000511439 RNASE3P12724 160 aaKnown RBP1.37□□□□□ -2.19
TOPBP1-208ENST00000511439 S100A1P23297 94 aa1.37□□□□□ -2.19
TOPBP1-208ENST00000511439 ATP11AUNQ6ZP68 121 aa1.37□□□□□ -2.19
TOPBP1-208ENST00000511439 MRPL35Q9NZE8 188 aaKnown RBP1.37□□□□□ -2.19
TOPBP1-208ENST00000511439 A0A1B0GV90 55 aa1.36□□□□□ -2.19
TOPBP1-208ENST00000511439 F6UZH7 168 aa1.36□□□□□ -2.19
TOPBP1-208ENST00000511439 CCL25O15444 150 aa1.36□□□□□ -2.19
TOPBP1-208ENST00000511439 MT1BP07438 61 aa1.36□□□□□ -2.19
TOPBP1-208ENST00000511439 CKS2P33552 79 aa1.36□□□□□ -2.19
TOPBP1-208ENST00000511439 GGACTQ9BVM4 153 aa1.36□□□□□ -2.19
TOPBP1-208ENST00000511439 C22orf24Q9Y442 160 aa1.36□□□□□ -2.19
TOPBP1-208ENST00000511439 C3orf85A0A1B0GTC6 90 aa1.35□□□□□ -2.19
TOPBP1-208ENST00000511439 IFITM5A6NNB3 132 aa1.35□□□□□ -2.19
TOPBP1-208ENST00000511439 LINC00587B1AMM8 73 aa1.35□□□□□ -2.19
TOPBP1-208ENST00000511439 FAM25AB3EWG3 89 aa1.35□□□□□ -2.19
TOPBP1-208ENST00000511439 FAM25CB3EWG5 89 aa1.35□□□□□ -2.19
TOPBP1-208ENST00000511439 FAM25GB3EWG6 89 aa1.35□□□□□ -2.19
TOPBP1-208ENST00000511439 NDUFA1O15239 70 aa1.35□□□□□ -2.19
TOPBP1-208ENST00000511439 SPAG11BQ08648 103 aa1.35□□□□□ -2.19
TOPBP1-208ENST00000511439 NEDD8Q15843 81 aa1.35□□□□□ -2.19
TOPBP1-208ENST00000511439 ZNF56Q15929 161 aa1.35□□□□□ -2.19
TOPBP1-208ENST00000511439 C10orf113Q5VZT2 155 aa1.35□□□□□ -2.19
TOPBP1-208ENST00000511439 IZUMO2Q6UXV1 221 aa1.35□□□□□ -2.19
TOPBP1-208ENST00000511439 CASC2Q6XLA1 102 aa1.35□□□□□ -2.19
TOPBP1-208ENST00000511439 CIB3Q96Q77 187 aaPredicted RBP1.35□□□□□ -2.19
TOPBP1-208ENST00000511439 FAM236AA0A1B0GUQ0 79 aa1.34□□□□□ -2.19
TOPBP1-208ENST00000511439 FAM236BA0A1B0GV22 79 aa1.34□□□□□ -2.19
TOPBP1-208ENST00000511439 CD3DP04234 171 aa1.34□□□□□ -2.19
TOPBP1-208ENST00000511439 PRLHP81277 87 aa1.34□□□□□ -2.19
TOPBP1-208ENST00000511439 COA5Q86WW8 74 aa1.34□□□□□ -2.19
TOPBP1-208ENST00000511439 OR10AG1Q8NH19 301 aa1.34□□□□□ -2.19
TOPBP1-208ENST00000511439 SPRR4Q96PI1 79 aa1.34□□□□□ -2.19
TOPBP1-208ENST00000511439 SMIM7Q9BQ49 75 aa1.34□□□□□ -2.19
TOPBP1-208ENST00000511439 LIMD2Q9BT23 127 aa1.34□□□□□ -2.19
TOPBP1-208ENST00000511439 SCN3BQ9NY72 215 aa1.34□□□□□ -2.19
TOPBP1-208ENST00000511439 LINC00959A0A1B0GUT2 108 aa1.33□□□□□ -2.2
TOPBP1-208ENST00000511439 C9orf170A2RU37 121 aa1.33□□□□□ -2.2
TOPBP1-208ENST00000511439 H3BVH4 76 aa1.33□□□□□ -2.2
TOPBP1-208ENST00000511439 PYYP10082 97 aa1.33□□□□□ -2.2
TOPBP1-208ENST00000511439 COX7CP15954 63 aa1.33□□□□□ -2.2
TOPBP1-208ENST00000511439 S100PP25815 95 aa1.33□□□□□ -2.2
TOPBP1-208ENST00000511439 RBM3P98179 157 aaKnown RBP1.33□□□□□ -2.2
TOPBP1-208ENST00000511439 CLLU1Q5K131 121 aa1.33□□□□□ -2.2
TOPBP1-208ENST00000511439 LINC01545Q5VT33 79 aa1.33□□□□□ -2.2
TOPBP1-208ENST00000511439 DEFB107AQ8IZN7 70 aa1.33□□□□□ -2.2
TOPBP1-208ENST00000511439 COPS9Q8WXC6 57 aa1.33□□□□□ -2.2
TOPBP1-208ENST00000511439 ORMDL1Q9P0S3 153 aa1.33□□□□□ -2.2
TOPBP1-208ENST00000511439 TMEM14CQ9P0S9 112 aa1.33□□□□□ -2.2
TOPBP1-208ENST00000511439 F8W1H4 67 aa1.32□□□□□ -2.2
TOPBP1-208ENST00000511439 PDCD5O14737 125 aa1.32□□□□□ -2.2
TOPBP1-208ENST00000511439 IAPPP10997 89 aa1.32□□□□□ -2.2
TOPBP1-208ENST00000511439 FGF7P21781 194 aa1.32□□□□□ -2.2
TOPBP1-208ENST00000511439 MRPS10P82664 201 aaKnown RBP1.32□□□□□ -2.2
TOPBP1-208ENST00000511439 FAM74A1Q5RGS3 127 aa1.32□□□□□ -2.2
TOPBP1-208ENST00000511439 TEX261Q6UWH6 196 aa1.32□□□□□ -2.2
TOPBP1-208ENST00000511439 SSBP3-AS1Q7Z2R9 100 aa1.32□□□□□ -2.2
TOPBP1-208ENST00000511439 MED9Q9NWA0 146 aa1.32□□□□□ -2.2
TOPBP1-208ENST00000511439 C6orf48Q9UBA6 75 aa1.32□□□□□ -2.2
TOPBP1-208ENST00000511439 LSM2Q9Y333 95 aaKnown RBP1.32□□□□□ -2.2
TOPBP1-208ENST00000511439 AP4S1Q9Y587 144 aa1.32□□□□□ -2.2
TOPBP1-208ENST00000511439 TRBV6-5A0A0K0K1A5 114 aa1.31□□□□□ -2.2
TOPBP1-208ENST00000511439 ZNF25P17030 456 aaPredicted RBP1.31□□□□□ -2.2
TOPBP1-208ENST00000511439 KCNRGQ8N5I3 272 aa1.31□□□□□ -2.2
TOPBP1-208ENST00000511439 PSMG3Q9BT73 122 aaPredicted RBP1.31□□□□□ -2.2
TOPBP1-208ENST00000511439 NMES1Q9C002 83 aa1.31□□□□□ -2.2
TOPBP1-208ENST00000511439 LOC107984156A0A0G2JMH3 177 aa1.3□□□□□ -2.2
TOPBP1-208ENST00000511439 TRBV30A0A0K0K1B3 111 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms