RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 LY6EQ16553 131 aa2.89□□□□□ -1.95
HMGB3P13-201ENST00000511263 PRR9Q5T870 116 aa2.89□□□□□ -1.95
HMGB3P13-201ENST00000511263 SPATA8Q6RVD6 105 aa2.89□□□□□ -1.95
HMGB3P13-201ENST00000511263 DMAC1Q96GE9 116 aa2.89□□□□□ -1.95
HMGB3P13-201ENST00000511263 NAV3Q8IVL0 2385 aa2.89□□□□□ -1.95
HMGB3P13-201ENST00000511263 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.88□□□□□ -1.95
HMGB3P13-201ENST00000511263 MED13LQ71F56 2210 aa2.88□□□□□ -1.95
HMGB3P13-201ENST00000511263 G3V318 75 aa2.88□□□□□ -1.95
HMGB3P13-201ENST00000511263 C1orf137Q5JT78 98 aa2.88□□□□□ -1.95
HMGB3P13-201ENST00000511263 ADM2Q7Z4H4 148 aa2.88□□□□□ -1.95
HMGB3P13-201ENST00000511263 COL12A1Q99715 3063 aa2.88□□□□□ -1.95
HMGB3P13-201ENST00000511263 DOPEY2Q9Y3R5 2298 aa2.88□□□□□ -1.95
HMGB3P13-201ENST00000511263 M0R2N4 97 aa2.87□□□□□ -1.95
HMGB3P13-201ENST00000511263 PRB3Q04118 309 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P13-201ENST00000511263 LUZP6Q538Z0 58 aa2.87□□□□□ -1.95
HMGB3P13-201ENST00000511263 Q8N9L7 120 aa2.87□□□□□ -1.95
HMGB3P13-201ENST00000511263 C9orf163Q8N9P6 203 aa2.87□□□□□ -1.95
HMGB3P13-201ENST00000511263 C4orf3Q8WVX3 66 aa2.87□□□□□ -1.95
HMGB3P13-201ENST00000511263 AKAP6Q13023 2319 aa2.87□□□□□ -1.95
HMGB3P13-201ENST00000511263 HIVEP2P31629 2446 aa2.86□□□□□ -1.95
HMGB3P13-201ENST00000511263 DEFB131BA0A096LNP1 70 aa2.86□□□□□ -1.95
HMGB3P13-201ENST00000511263 PRB2P02812 416 aaPredicted RBP2.86□□□□□ -1.95
HMGB3P13-201ENST00000511263 COX6A2Q02221 97 aa2.86□□□□□ -1.95
HMGB3P13-201ENST00000511263 KRTAP25-1Q3LHN0 102 aa2.86□□□□□ -1.95
HMGB3P13-201ENST00000511263 KRTAP21-3Q3LHN1 58 aa2.86□□□□□ -1.95
HMGB3P13-201ENST00000511263 ST20-AS1Q8NBB2 130 aa2.86□□□□□ -1.95
HMGB3P13-201ENST00000511263 SMR3AQ99954 134 aa2.86□□□□□ -1.95
HMGB3P13-201ENST00000511263 ABCA1O95477 2261 aa2.86□□□□□ -1.95
HMGB3P13-201ENST00000511263 APCP25054 2843 aa2.86□□□□□ -1.95
HMGB3P13-201ENST00000511263 UNC79Q9P2D8 2635 aa2.85□□□□□ -1.95
HMGB3P13-201ENST00000511263 APELAP0DMC3 54 aa2.85□□□□□ -1.95
HMGB3P13-201ENST00000511263 LINC00483Q53H64 154 aa2.85□□□□□ -1.95
HMGB3P13-201ENST00000511263 KRTAP5-5Q701N2 237 aaPredicted RBP2.85□□□□□ -1.95
HMGB3P13-201ENST00000511263 Q8IZM0 81 aa2.85□□□□□ -1.95
HMGB3P13-201ENST00000511263 C8orf17Q9NRJ1 99 aa2.85□□□□□ -1.95
HMGB3P13-201ENST00000511263 TOMM7Q9P0U1 55 aa2.85□□□□□ -1.95
HMGB3P13-201ENST00000511263 PDZD2O15018 2839 aa2.85□□□□□ -1.95
HMGB3P13-201ENST00000511263 CREBBPQ92793 2442 aa2.84□□□□□ -1.95
HMGB3P13-201ENST00000511263 CELSR2Q9HCU4 2923 aa2.84□□□□□ -1.95
HMGB3P13-201ENST00000511263 CSPG4Q6UVK1 2322 aa2.84□□□□□ -1.95
HMGB3P13-201ENST00000511263 IGLV1-50A0A075B6I6 118 aa2.84□□□□□ -1.95
HMGB3P13-201ENST00000511263 A8MWP4 228 aa2.84□□□□□ -1.95
HMGB3P13-201ENST00000511263 CASC10Q5T4H9 136 aa2.84□□□□□ -1.95
HMGB3P13-201ENST00000511263 SPRR4Q96PI1 79 aa2.84□□□□□ -1.95
HMGB3P13-201ENST00000511263 RHPN1-AS1Q9BWJ2 59 aa2.84□□□□□ -1.95
HMGB3P13-201ENST00000511263 CR1P17927 2039 aa2.84□□□□□ -1.95
HMGB3P13-201ENST00000511263 UTP20O75691 2785 aaKnown RBP2.84□□□□□ -1.95
HMGB3P13-201ENST00000511263 WNK2Q9Y3S1 2297 aa2.84□□□□□ -1.96
HMGB3P13-201ENST00000511263 IGKV2D-24A0A075B6R9 120 aa2.83□□□□□ -1.96
HMGB3P13-201ENST00000511263 LINC00959A0A1B0GUT2 108 aa2.83□□□□□ -1.96
HMGB3P13-201ENST00000511263 DEFB104AQ8WTQ1 72 aa2.83□□□□□ -1.96
HMGB3P13-201ENST00000511263 C16orf74Q96GX8 76 aa2.83□□□□□ -1.96
HMGB3P13-201ENST00000511263 C20orf166-AS1Q96NR2 134 aa2.83□□□□□ -1.96
HMGB3P13-201ENST00000511263 LRBAP50851 2863 aa2.82□□□□□ -1.96
HMGB3P13-201ENST00000511263 IGLV5-48A0A075B6I7 105 aa2.82□□□□□ -1.96
HMGB3P13-201ENST00000511263 A0A1B0GU69 56 aa2.82□□□□□ -1.96
HMGB3P13-201ENST00000511263 NUPR2A6NF83 97 aa2.82□□□□□ -1.96
HMGB3P13-201ENST00000511263 IGLV6-57P01721 117 aa2.82□□□□□ -1.96
HMGB3P13-201ENST00000511263 TP53AIP1Q9HCN2 124 aa2.82□□□□□ -1.96
HMGB3P13-201ENST00000511263 ITPR3Q14573 2671 aa2.82□□□□□ -1.96
HMGB3P13-201ENST00000511263 NBPF19A0A087WUL8 3843 aa2.82□□□□□ -1.96
HMGB3P13-201ENST00000511263 FBN2P35556 2912 aa2.82□□□□□ -1.96
HMGB3P13-201ENST00000511263 CCDC168Q8NDH2 2452 aa2.81□□□□□ -1.96
HMGB3P13-201ENST00000511263 ABCA12Q86UK0 2595 aa2.81□□□□□ -1.96
HMGB3P13-201ENST00000511263 ANKRD17O75179 2603 aaKnown RBP2.81□□□□□ -1.96
HMGB3P13-201ENST00000511263 ITPR2Q14571 2701 aa2.81□□□□□ -1.96
HMGB3P13-201ENST00000511263 DCHS2Q6V1P9 2916 aa2.81□□□□□ -1.96
HMGB3P13-201ENST00000511263 EGFEM1PQ0D2K5 195 aa2.81□□□□□ -1.96
HMGB3P13-201ENST00000511263 KRTAP11-1Q8IUC1 163 aa2.81□□□□□ -1.96
HMGB3P13-201ENST00000511263 KLK12Q9UKR0 248 aa2.81□□□□□ -1.96
HMGB3P13-201ENST00000511263 FLNBO75369 2602 aaKnown RBP2.81□□□□□ -1.96
HMGB3P13-201ENST00000511263 TENM4Q6N022 2769 aa2.81□□□□□ -1.96
HMGB3P13-201ENST00000511263 TEX15Q9BXT5 2789 aa2.81□□□□□ -1.96
HMGB3P13-201ENST00000511263 CENPEQ02224 2701 aa2.8□□□□□ -1.96
HMGB3P13-201ENST00000511263 POLQO75417 2590 aa2.8□□□□□ -1.96
HMGB3P13-201ENST00000511263 K7EQZ3 153 aa2.8□□□□□ -1.96
HMGB3P13-201ENST00000511263 ZNF861PO60384 105 aa2.8□□□□□ -1.96
HMGB3P13-201ENST00000511263 C7orf33Q8WU49 177 aa2.8□□□□□ -1.96
HMGB3P13-201ENST00000511263 GCN1Q92616 2671 aaKnown RBP2.8□□□□□ -1.96
HMGB3P13-201ENST00000511263 TACC2O95359 2948 aa2.79□□□□□ -1.96
HMGB3P13-201ENST00000511263 HECTD1Q9ULT8 2610 aa2.79□□□□□ -1.96
HMGB3P13-201ENST00000511263 A8MTW9 85 aa2.79□□□□□ -1.96
HMGB3P13-201ENST00000511263 KRTAP4-16G5E9R7 235 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P13-201ENST00000511263 C10orf99Q6UWK7 81 aa2.79□□□□□ -1.96
HMGB3P13-201ENST00000511263 CAMK2N1Q7Z7J9 78 aa2.79□□□□□ -1.96
HMGB3P13-201ENST00000511263 ZFHX3Q15911 3703 aa2.79□□□□□ -1.96
HMGB3P13-201ENST00000511263 HRNRQ86YZ3 2850 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P13-201ENST00000511263 MYO9AB2RTY4 2548 aa2.79□□□□□ -1.96
HMGB3P13-201ENST00000511263 CRYBG3Q68DQ2 2970 aa2.79□□□□□ -1.96
HMGB3P13-201ENST00000511263 TRGV1A0A0A0MS02 117 aa2.78□□□□□ -1.96
HMGB3P13-201ENST00000511263 P0C880 135 aa2.78□□□□□ -1.96
HMGB3P13-201ENST00000511263 ASH1LQ9NR48 2969 aaKnown RBP2.78□□□□□ -1.96
HMGB3P13-201ENST00000511263 VPS13CQ709C8 3753 aa2.77□□□□□ -1.97
HMGB3P13-201ENST00000511263 ACANP16112 2415 aa2.77□□□□□ -1.97
HMGB3P13-201ENST00000511263 TLX1NBP0CAT3 122 aa2.77□□□□□ -1.97
HMGB3P13-201ENST00000511263 HRES1P13985 223 aa2.77□□□□□ -1.97
HMGB3P13-201ENST00000511263 ACYP2P14621 99 aa2.77□□□□□ -1.97
HMGB3P13-201ENST00000511263 HIVEP1P15822 2718 aa2.76□□□□□ -1.97
HMGB3P13-201ENST00000511263 CSMD1Q96PZ7 3565 aa2.76□□□□□ -1.97
HMGB3P13-201ENST00000511263 IGKV3-7A0A075B6H7 116 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms