RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-223	ENST00000509900	IFITM2	Q01629	132 aa		4.31	□□□□□ -1.72
PTPN20-223	ENST00000509900	MAP1LC3C	Q9BXW4	147 aa		4.31	□□□□□ -1.72
PTPN20-223	ENST00000509900	IGLV5-48	A0A075B6I7	105 aa		4.3	□□□□□ -1.72
PTPN20-223	ENST00000509900	TRBV7-7	A0A0K0K1E9	115 aa		4.3	□□□□□ -1.72
PTPN20-223	ENST00000509900	LINC00587	B1AMM8	73 aa		4.3	□□□□□ -1.72
PTPN20-223	ENST00000509900	ELOF1	P60002	83 aa	Known RBP	4.29	□□□□□ -1.72
PTPN20-223	ENST00000509900	KRTAP19-8	Q3LI54	63 aa		4.29	□□□□□ -1.72
PTPN20-223	ENST00000509900		C9JQL5	133 aa		4.28	□□□□□ -1.72
PTPN20-223	ENST00000509900	URB1-AS1	Q96HZ7	61 aa		4.28	□□□□□ -1.72
PTPN20-223	ENST00000509900		A0A096LNJ9	63 aa		4.27	□□□□□ -1.73
PTPN20-223	ENST00000509900	SOSTDC1	Q6X4U4	206 aa		4.27	□□□□□ -1.73
PTPN20-223	ENST00000509900	BAGE3	Q86Y29	109 aa		4.27	□□□□□ -1.73
PTPN20-223	ENST00000509900	MIEN1	Q9BRT3	115 aa		4.27	□□□□□ -1.73
PTPN20-223	ENST00000509900	HBD	P02042	147 aa		4.26	□□□□□ -1.73
PTPN20-223	ENST00000509900	COX7B	P24311	80 aa		4.26	□□□□□ -1.73
PTPN20-223	ENST00000509900	DSCR10	P59022	87 aa		4.26	□□□□□ -1.73
PTPN20-223	ENST00000509900	MYMX	A0A1B0GTQ4	84 aa		4.25	□□□□□ -1.73
PTPN20-223	ENST00000509900	CLLU1	Q5K131	121 aa		4.25	□□□□□ -1.73
PTPN20-223	ENST00000509900	COMMD7	Q86VX2	200 aa		4.25	□□□□□ -1.73
PTPN20-223	ENST00000509900	CBY1	Q9Y3M2	126 aa		4.25	□□□□□ -1.73
PTPN20-223	ENST00000509900	LST1	O00453	97 aa		4.24	□□□□□ -1.73
PTPN20-223	ENST00000509900	KRTAP10-12	P60413	245 aa		4.24	□□□□□ -1.73
PTPN20-223	ENST00000509900	RPS10P5	Q9NQ39	176 aa		4.24	□□□□□ -1.73
PTPN20-223	ENST00000509900	DST	Q03001	7570 aa	Known RBP	4.24	□□□□□ -1.73
PTPN20-223	ENST00000509900	SCGB1D1	O95968	90 aa		4.23	□□□□□ -1.73
PTPN20-223	ENST00000509900	NPC2	P61916	151 aa		4.23	□□□□□ -1.73
PTPN20-223	ENST00000509900		A0A1W2PNM2	257 aa		4.22	□□□□□ -1.73
PTPN20-223	ENST00000509900	TSPEAR-AS2	P59090	65 aa		4.22	□□□□□ -1.73
PTPN20-223	ENST00000509900	KRTAP8-1	Q8IUC2	63 aa		4.22	□□□□□ -1.73
PTPN20-223	ENST00000509900	SLC7A5P1	Q8MH63	180 aa		4.22	□□□□□ -1.73
PTPN20-223	ENST00000509900	CLEC2B	Q92478	149 aa		4.22	□□□□□ -1.73
PTPN20-223	ENST00000509900	RHEB	Q15382	184 aa		4.21	□□□□□ -1.74
PTPN20-223	ENST00000509900	OR13C6P	Q8NH95	151 aa		4.21	□□□□□ -1.74
PTPN20-223	ENST00000509900	FAM218A	Q96MZ4	157 aa		4.21	□□□□□ -1.74
PTPN20-223	ENST00000509900	SMCO4	Q9NRQ5	59 aa		4.21	□□□□□ -1.74
PTPN20-223	ENST00000509900	PCP4	P48539	62 aa		4.2	□□□□□ -1.74
PTPN20-223	ENST00000509900	PEA15	Q15121	130 aa		4.2	□□□□□ -1.74
PTPN20-223	ENST00000509900	NDUFA5	Q16718	116 aa		4.2	□□□□□ -1.74
PTPN20-223	ENST00000509900	SPRR2G	Q9BYE4	73 aa		4.2	□□□□□ -1.74
PTPN20-223	ENST00000509900	LCE1F	Q5T754	118 aa		4.19	□□□□□ -1.74
PTPN20-223	ENST00000509900		Q6JHZ5	121 aa		4.19	□□□□□ -1.74
PTPN20-223	ENST00000509900		F8WEM9	126 aa		4.18	□□□□□ -1.74
PTPN20-223	ENST00000509900	PMCHL1	Q16048	86 aa		4.18	□□□□□ -1.74
PTPN20-223	ENST00000509900	ADAMTSL4-AS1	Q5T5F5	129 aa		4.18	□□□□□ -1.74
PTPN20-223	ENST00000509900	SPINK7	P58062	85 aa		4.17	□□□□□ -1.74
PTPN20-223	ENST00000509900	UQCC3	Q6UW78	93 aa		4.17	□□□□□ -1.74
PTPN20-223	ENST00000509900	TRBV7-6	A0A0J9YX20	115 aa		4.16	□□□□□ -1.74
PTPN20-223	ENST00000509900		A0A1B0GWB2	263 aa		4.16	□□□□□ -1.74
PTPN20-223	ENST00000509900	TMEM218	A2RU14	115 aa		4.16	□□□□□ -1.74
PTPN20-223	ENST00000509900	KRTAP5-10	Q6L8G5	202 aa		4.16	□□□□□ -1.74
PTPN20-223	ENST00000509900	SPANXD	Q9BXN6	97 aa		4.16	□□□□□ -1.74
PTPN20-223	ENST00000509900	IMUP	Q9GZP8	106 aa		4.16	□□□□□ -1.74
PTPN20-223	ENST00000509900	WFDC13	Q8IUB5	93 aa		4.15	□□□□□ -1.75
PTPN20-223	ENST00000509900	COLCA2	A8K830	154 aa		4.14	□□□□□ -1.75
PTPN20-223	ENST00000509900	APOC3	P02656	99 aa		4.14	□□□□□ -1.75
PTPN20-223	ENST00000509900	LINC00313	P59037	77 aa		4.14	□□□□□ -1.75
PTPN20-223	ENST00000509900	SPANXC	Q9NY87	97 aa		4.14	□□□□□ -1.75
PTPN20-223	ENST00000509900	TRAV12-1	A0A0B4J245	112 aa		4.13	□□□□□ -1.75
PTPN20-223	ENST00000509900	LEPROT	O15243	131 aa		4.13	□□□□□ -1.75
PTPN20-223	ENST00000509900	LINC00518	Q8N0U6	118 aa		4.13	□□□□□ -1.75
PTPN20-223	ENST00000509900	SEC11C	Q9BY50	192 aa		4.13	□□□□□ -1.75
PTPN20-223	ENST00000509900	AHNAK2	Q8IVF2	5795 aa		4.12	□□□□□ -1.75
PTPN20-223	ENST00000509900	ZNF815P	A8K554	130 aa		4.12	□□□□□ -1.75
PTPN20-223	ENST00000509900	S100A1	P23297	94 aa		4.12	□□□□□ -1.75
PTPN20-223	ENST00000509900		J3QQQ9	107 aa		4.11	□□□□□ -1.75
PTPN20-223	ENST00000509900	MT-ND4L	P03901	98 aa		4.11	□□□□□ -1.75
PTPN20-223	ENST00000509900	OCIAD2	Q56VL3	154 aa		4.11	□□□□□ -1.75
PTPN20-223	ENST00000509900	SS18L2	Q9UHA2	77 aa		4.11	□□□□□ -1.75
PTPN20-223	ENST00000509900	TRAV13-2	A0A0B4J235	113 aa		4.1	□□□□□ -1.75
PTPN20-223	ENST00000509900	SNAPIN	O95295	136 aa		4.1	□□□□□ -1.75
PTPN20-223	ENST00000509900	LINC00614	P0C842	121 aa		4.1	□□□□□ -1.75
PTPN20-223	ENST00000509900	SVBP	Q8N300	66 aa		4.1	□□□□□ -1.75
PTPN20-223	ENST00000509900	LINC00308	Q8TCZ7	52 aa		4.1	□□□□□ -1.75
PTPN20-223	ENST00000509900		A0A0J9YXY3	114 aa		4.09	□□□□□ -1.75
PTPN20-223	ENST00000509900	FAM236A	A0A1B0GUQ0	79 aa		4.09	□□□□□ -1.75
PTPN20-223	ENST00000509900	FAM236B	A0A1B0GV22	79 aa		4.09	□□□□□ -1.75
PTPN20-223	ENST00000509900	NMU	P48645	174 aa		4.09	□□□□□ -1.75
PTPN20-223	ENST00000509900	H1FX-AS1	Q4G0G2	97 aa		4.09	□□□□□ -1.75
PTPN20-223	ENST00000509900	HMCN1	Q96RW7	5635 aa		4.08	□□□□□ -1.76
PTPN20-223	ENST00000509900	KRTAP5-7	Q6L8G8	165 aa		4.08	□□□□□ -1.76
PTPN20-223	ENST00000509900	SIGMAR1	Q99720	223 aa		4.08	□□□□□ -1.76
PTPN20-223	ENST00000509900	C18orf32	Q8TCD1	76 aa		4.07	□□□□□ -1.76
PTPN20-223	ENST00000509900	ZCCHC13	Q8WW36	166 aa	Known RBP	4.07	□□□□□ -1.76
PTPN20-223	ENST00000509900	IFI27L1	Q96BM0	104 aa		4.07	□□□□□ -1.76
PTPN20-223	ENST00000509900	LITAF	Q99732	161 aa		4.06	□□□□□ -1.76
PTPN20-223	ENST00000509900	NHP2	Q9NX24	153 aa	Known RBP	4.06	□□□□□ -1.76
PTPN20-223	ENST00000509900		A4D1N5	150 aa		4.05	□□□□□ -1.76
PTPN20-223	ENST00000509900		H3BUT2	72 aa		4.05	□□□□□ -1.76
PTPN20-223	ENST00000509900	S100P	P25815	95 aa		4.05	□□□□□ -1.76
PTPN20-223	ENST00000509900	FABP9	Q0Z7S8	132 aa		4.05	□□□□□ -1.76
PTPN20-223	ENST00000509900		A0A087WSZ3	146 aa		4.03	□□□□□ -1.76
PTPN20-223	ENST00000509900		Q6ZQY7	126 aa		4.03	□□□□□ -1.76
PTPN20-223	ENST00000509900	YPEL4	Q96NS1	127 aa		4.01	□□□□□ -1.77
PTPN20-223	ENST00000509900	IGKV4-1	P06312	121 aa		4	□□□□□ -1.77
PTPN20-223	ENST00000509900	LCE3C	Q5T5A8	94 aa		4	□□□□□ -1.77
PTPN20-223	ENST00000509900	TEN1	Q86WV5	123 aa		4	□□□□□ -1.77
PTPN20-223	ENST00000509900	OBSCN	Q5VST9	7968 aa		4	□□□□□ -1.77
PTPN20-223	ENST00000509900		H0Y8G0	127 aa		3.99	□□□□□ -1.77
PTPN20-223	ENST00000509900	SERF1A	O75920	110 aa		3.99	□□□□□ -1.77
PTPN20-223	ENST00000509900	KRTAP12-2	P59991	146 aa		3.99	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms