RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 VAMP8Q9BV40 100 aa8.27□□□□□ -1.09
RAB40C-202ENST00000509637 Q6ZVH6 145 aa8.26□□□□□ -1.09
RAB40C-202ENST00000509637 KRTAP9-8Q9BYQ0 159 aa8.26□□□□□ -1.09
RAB40C-202ENST00000509637 PAM16Q9Y3D7 125 aa8.26□□□□□ -1.09
RAB40C-202ENST00000509637 A0A1B0GWB2 263 aa8.25□□□□□ -1.09
RAB40C-202ENST00000509637 COX8AP10176 69 aa8.24□□□□□ -1.09
RAB40C-202ENST00000509637 SPATA45Q537H7 98 aa8.24□□□□□ -1.09
RAB40C-202ENST00000509637 PYY3Q5JQD4 70 aa8.24□□□□□ -1.09
RAB40C-202ENST00000509637 KRTAP9-7A8MTY7 169 aa8.23□□□□□ -1.09
RAB40C-202ENST00000509637 IFITM1P13164 125 aa8.23□□□□□ -1.09
RAB40C-202ENST00000509637 MUSTN1Q8IVN3 82 aa8.23□□□□□ -1.09
RAB40C-202ENST00000509637 DLEU1O43261 78 aa8.22□□□□□ -1.09
RAB40C-202ENST00000509637 SMIM11BQ8TCY0 68 aa8.22□□□□□ -1.09
RAB40C-202ENST00000509637 A6NDN8 102 aa8.21□□□□□ -1.1
RAB40C-202ENST00000509637 USH2AO75445 5202 aa8.21□□□□□ -1.1
RAB40C-202ENST00000509637 SSPOA2VEC9 5147 aa8.2□□□□□ -1.1
RAB40C-202ENST00000509637 C14orf144Q96I85 54 aa8.2□□□□□ -1.1
RAB40C-202ENST00000509637 Q6Q795 121 aa8.19□□□□□ -1.1
RAB40C-202ENST00000509637 TCL1BO95988 128 aa8.17□□□□□ -1.1
RAB40C-202ENST00000509637 IGFL1Q6UW32 110 aa8.17□□□□□ -1.1
RAB40C-202ENST00000509637 OBSCN-AS1Q96MR7 158 aa8.17□□□□□ -1.1
RAB40C-202ENST00000509637 Q75L30 129 aa8.16□□□□□ -1.1
RAB40C-202ENST00000509637 TRBV7-7A0A0K0K1E9 115 aa8.15□□□□□ -1.1
RAB40C-202ENST00000509637 HIST1H4GQ99525 98 aa8.15□□□□□ -1.1
RAB40C-202ENST00000509637 HIGD1BQ9P298 99 aa8.15□□□□□ -1.1
RAB40C-202ENST00000509637 LINC00575Q6W349 94 aa8.14□□□□□ -1.11
RAB40C-202ENST00000509637 A4D1N5 150 aa8.13□□□□□ -1.11
RAB40C-202ENST00000509637 TRAV13-2A0A0B4J235 113 aa8.11□□□□□ -1.11
RAB40C-202ENST00000509637 Q6ZQY7 126 aa8.11□□□□□ -1.11
RAB40C-202ENST00000509637 SMIM6P0DI80 62 aa8.1□□□□□ -1.11
RAB40C-202ENST00000509637 C2orf91Q6ZV80 131 aa8.1□□□□□ -1.11
RAB40C-202ENST00000509637 OCIAD2Q56VL3 154 aa8.09□□□□□ -1.11
RAB40C-202ENST00000509637 ATP11AUNQ6ZP68 121 aa8.09□□□□□ -1.11
RAB40C-202ENST00000509637 UQCR10Q9UDW1 63 aa8.09□□□□□ -1.11
RAB40C-202ENST00000509637 LCE2BO14633 110 aa8.08□□□□□ -1.12
RAB40C-202ENST00000509637 MT2AP02795 61 aa8.08□□□□□ -1.12
RAB40C-202ENST00000509637 CLEC2BQ92478 149 aa8.08□□□□□ -1.12
RAB40C-202ENST00000509637 NHP2Q9NX24 153 aaKnown RBP8.08□□□□□ -1.12
RAB40C-202ENST00000509637 KRTAP16-1A8MUX0 517 aa8.07□□□□□ -1.12
RAB40C-202ENST00000509637 Q6JHZ5 121 aa8.07□□□□□ -1.12
RAB40C-202ENST00000509637 FCGBPQ9Y6R7 5405 aaPredicted RBP8.07□□□□□ -1.12
RAB40C-202ENST00000509637 LOC105371267A0A1B0GV96 52 aa8.06□□□□□ -1.12
RAB40C-202ENST00000509637 hADV29S1A0JD25 119 aa8.06□□□□□ -1.12
RAB40C-202ENST00000509637 F8WEM9 126 aa8.06□□□□□ -1.12
RAB40C-202ENST00000509637 Q96NJ1 140 aa8.06□□□□□ -1.12
RAB40C-202ENST00000509637 TMEM238LA0A1B0GVL6 79 aa8.05□□□□□ -1.12
RAB40C-202ENST00000509637 A6NJY4 79 aa8.05□□□□□ -1.12
RAB40C-202ENST00000509637 H3BUT2 72 aa8.05□□□□□ -1.12
RAB40C-202ENST00000509637 CEND1Q8N111 149 aa8.05□□□□□ -1.12
RAB40C-202ENST00000509637 C20orf166-AS1Q96NR2 134 aa8.05□□□□□ -1.12
RAB40C-202ENST00000509637 A8MUU9 505 aa8.04□□□□□ -1.12
RAB40C-202ENST00000509637 C12orf57Q99622 126 aa8.04□□□□□ -1.12
RAB40C-202ENST00000509637 MT1FP04733 61 aa8.03□□□□□ -1.12
RAB40C-202ENST00000509637 CFC1P0CG37 223 aa8.03□□□□□ -1.12
RAB40C-202ENST00000509637 HSD52Q0P140 79 aa8.03□□□□□ -1.12
RAB40C-202ENST00000509637 KRTAP19-1Q8IUB9 90 aa8.02□□□□□ -1.13
RAB40C-202ENST00000509637 RAB37Q96AX2 223 aa8.02□□□□□ -1.13
RAB40C-202ENST00000509637 A0A0B4J2C4 111 aa8.01□□□□□ -1.13
RAB40C-202ENST00000509637 KRTAP9-3Q9BYQ3 159 aa8.01□□□□□ -1.13
RAB40C-202ENST00000509637 VAMP3Q15836 100 aa8□□□□□ -1.13
RAB40C-202ENST00000509637 LST1O00453 97 aa7.99□□□□□ -1.13
RAB40C-202ENST00000509637 FXYD2P54710 66 aa7.99□□□□□ -1.13
RAB40C-202ENST00000509637 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.98□□□□□ -1.13
RAB40C-202ENST00000509637 TSTD3H0UI37 97 aa7.97□□□□□ -1.13
RAB40C-202ENST00000509637 PRO1854Q9UHT4 67 aa7.96□□□□□ -1.14
RAB40C-202ENST00000509637 BVES-AS1Q5T3Y7 98 aa7.95□□□□□ -1.14
RAB40C-202ENST00000509637 DSCR10P59022 87 aa7.94□□□□□ -1.14
RAB40C-202ENST00000509637 SNHG12Q9BXW3 62 aa7.94□□□□□ -1.14
RAB40C-202ENST00000509637 MPLKIPQ8TAP9 179 aa7.93□□□□□ -1.14
RAB40C-202ENST00000509637 M0R143 59 aa7.92□□□□□ -1.14
RAB40C-202ENST00000509637 FAM218AQ96MZ4 157 aa7.92□□□□□ -1.14
RAB40C-202ENST00000509637 HRES1P13985 223 aa7.91□□□□□ -1.14
RAB40C-202ENST00000509637 PPDPFLQ8WWR9 84 aa7.91□□□□□ -1.14
RAB40C-202ENST00000509637 NOTCH2NLQ7Z3S9 236 aa7.9□□□□□ -1.14
RAB40C-202ENST00000509637 A0A087WSZ3 146 aa7.89□□□□□ -1.15
RAB40C-202ENST00000509637 H0YGX0 51 aa7.89□□□□□ -1.15
RAB40C-202ENST00000509637 K7ERJ3 54 aa7.89□□□□□ -1.15
RAB40C-202ENST00000509637 SNCGO76070 127 aa7.89□□□□□ -1.15
RAB40C-202ENST00000509637 TRBV20-1A0A075B6N2 111 aa7.88□□□□□ -1.15
RAB40C-202ENST00000509637 TEN1Q86WV5 123 aa7.88□□□□□ -1.15
RAB40C-202ENST00000509637 NDUFV3P56181 108 aaKnown RBP7.87□□□□□ -1.15
RAB40C-202ENST00000509637 A0A1W2PNM2 257 aa7.86□□□□□ -1.15
RAB40C-202ENST00000509637 PSMB2P49721 201 aa7.86□□□□□ -1.15
RAB40C-202ENST00000509637 KRTAP10-10P60014 251 aa7.86□□□□□ -1.15
RAB40C-202ENST00000509637 COX6CP09669 75 aa7.85□□□□□ -1.15
RAB40C-202ENST00000509637 TRIAP1O43715 76 aa7.84□□□□□ -1.15
RAB40C-202ENST00000509637 SS18L2Q9UHA2 77 aa7.84□□□□□ -1.15
RAB40C-202ENST00000509637 A0A1B0GX51 115 aa7.82□□□□□ -1.16
RAB40C-202ENST00000509637 FAM236DA0A1B0GTK5 79 aa7.8□□□□□ -1.16
RAB40C-202ENST00000509637 GHRHP01286 108 aa7.8□□□□□ -1.16
RAB40C-202ENST00000509637 FAM236CP0DP71 79 aa7.8□□□□□ -1.16
RAB40C-202ENST00000509637 H3BMG7 143 aa7.79□□□□□ -1.16
RAB40C-202ENST00000509637 SCGB1C2P0DMR2 95 aa7.79□□□□□ -1.16
RAB40C-202ENST00000509637 BATFQ16520 125 aa7.79□□□□□ -1.16
RAB40C-202ENST00000509637 LINC00313P59037 77 aa7.78□□□□□ -1.16
RAB40C-202ENST00000509637 MACF1Q9UPN3 7388 aaKnown RBP7.77□□□□□ -1.17
RAB40C-202ENST00000509637 DNAL4O96015 105 aa7.77□□□□□ -1.17
RAB40C-202ENST00000509637 DEFB116Q30KQ4 102 aa7.77□□□□□ -1.17
RAB40C-202ENST00000509637 KRTAP19-6Q3LI70 58 aa7.77□□□□□ -1.17
RAB40C-202ENST00000509637 SIGMAR1Q99720 223 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms