RNA–Protein interactions for RNA: ENST00000509355.5

PDE4D-217, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 847 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-217ENST00000509355 FCGBPQ9Y6R7 5405 aaPredicted RBP2.38□□□□□ -2.03
PDE4D-217ENST00000509355 TRBV7-3A0A075B6L6 115 aa2.38□□□□□ -2.03
PDE4D-217ENST00000509355 A0A1W2PNN7 141 aa2.38□□□□□ -2.03
PDE4D-217ENST00000509355 RBAKDNA6NC62 111 aa2.38□□□□□ -2.03
PDE4D-217ENST00000509355 COLCA2A8K830 154 aa2.38□□□□□ -2.03
PDE4D-217ENST00000509355 F8W1H4 67 aa2.38□□□□□ -2.03
PDE4D-217ENST00000509355 SNCGO76070 127 aa2.38□□□□□ -2.03
PDE4D-217ENST00000509355 RPL28P46779 137 aaKnown RBP2.38□□□□□ -2.03
PDE4D-217ENST00000509355 KRTAP25-1Q3LHN0 102 aa2.38□□□□□ -2.03
PDE4D-217ENST00000509355 KHDC3LQ587J8 217 aa2.38□□□□□ -2.03
PDE4D-217ENST00000509355 C9orf116Q5BN46 136 aaPredicted RBP2.38□□□□□ -2.03
PDE4D-217ENST00000509355 TSKUQ8WUA8 353 aa2.38□□□□□ -2.03
PDE4D-217ENST00000509355 NPCDR1Q9BY65 106 aa2.38□□□□□ -2.03
PDE4D-217ENST00000509355 PSENENQ9NZ42 101 aa2.38□□□□□ -2.03
PDE4D-217ENST00000509355 EPDR1Q9UM22 224 aa2.38□□□□□ -2.03
PDE4D-217ENST00000509355 LENEPQ9Y5L5 61 aa2.38□□□□□ -2.03
PDE4D-217ENST00000509355 TRBV25-1A0A075B6N4 114 aa2.37□□□□□ -2.03
PDE4D-217ENST00000509355 IGKV3OR2-268A0A0C4DH90 116 aa2.37□□□□□ -2.03
PDE4D-217ENST00000509355 TRBV10-1A0A0K0K1A3 114 aa2.37□□□□□ -2.03
PDE4D-217ENST00000509355 C11orf86A6NJI1 115 aa2.37□□□□□ -2.03
PDE4D-217ENST00000509355 TCL1BO95988 128 aa2.37□□□□□ -2.03
PDE4D-217ENST00000509355 TPT1P13693 172 aaKnown RBP2.37□□□□□ -2.03
PDE4D-217ENST00000509355 UBE2D3P61077 147 aa2.37□□□□□ -2.03
PDE4D-217ENST00000509355 UBE2D2P62837 147 aa2.37□□□□□ -2.03
PDE4D-217ENST00000509355 KRTAP20-1Q3LI63 56 aa2.37□□□□□ -2.03
PDE4D-217ENST00000509355 C1orf64Q8NEQ6 169 aa2.37□□□□□ -2.03
PDE4D-217ENST00000509355 NMES1Q9C002 83 aa2.37□□□□□ -2.03
PDE4D-217ENST00000509355 LINC00846Q9NV44 126 aa2.37□□□□□ -2.03
PDE4D-217ENST00000509355 TMEM14CQ9P0S9 112 aa2.37□□□□□ -2.03
PDE4D-217ENST00000509355 GVQW2A0A096LPI5 108 aaPredicted RBP2.36□□□□□ -2.03
PDE4D-217ENST00000509355 K7ERJ3 54 aa2.36□□□□□ -2.03
PDE4D-217ENST00000509355 SS18Q15532 418 aa2.36□□□□□ -2.03
PDE4D-217ENST00000509355 Q5BKY6 102 aa2.36□□□□□ -2.03
PDE4D-217ENST00000509355 LYZL1Q6UWQ5 148 aa2.36□□□□□ -2.03
PDE4D-217ENST00000509355 LINC00304Q8N9R0 145 aa2.36□□□□□ -2.03
PDE4D-217ENST00000509355 CMTM2Q8TAZ6 248 aa2.36□□□□□ -2.03
PDE4D-217ENST00000509355 TRAV7A0A075B6U4 112 aa2.35□□□□□ -2.03
PDE4D-217ENST00000509355 NDUFB6O95139 128 aa2.35□□□□□ -2.03
PDE4D-217ENST00000509355 SLC25A6P12236 298 aa2.35□□□□□ -2.03
PDE4D-217ENST00000509355 RNASE3P12724 160 aaKnown RBP2.35□□□□□ -2.03
PDE4D-217ENST00000509355 COX7CP15954 63 aa2.35□□□□□ -2.03
PDE4D-217ENST00000509355 SEC11AP67812 179 aa2.35□□□□□ -2.03
PDE4D-217ENST00000509355 MIC13Q5XKP0 118 aa2.35□□□□□ -2.03
PDE4D-217ENST00000509355 COX6B2Q6YFQ2 88 aa2.35□□□□□ -2.03
PDE4D-217ENST00000509355 MGST2Q99735 147 aa2.35□□□□□ -2.03
PDE4D-217ENST00000509355 R4GN34 69 aa2.35□□□□□ -2.03
PDE4D-217ENST00000509355 V9GYH0 126 aa2.35□□□□□ -2.03
PDE4D-217ENST00000509355 IGHV1-24A0A0C4DH33 117 aa2.34□□□□□ -2.03
PDE4D-217ENST00000509355 H7C2G1 150 aa2.34□□□□□ -2.03
PDE4D-217ENST00000509355 SFT2D2O95562 160 aa2.34□□□□□ -2.03
PDE4D-217ENST00000509355 MT-ATP8P03928 68 aa2.34□□□□□ -2.03
PDE4D-217ENST00000509355 FXYD2P54710 66 aa2.34□□□□□ -2.03
PDE4D-217ENST00000509355 ADIRFQ15847 76 aa2.34□□□□□ -2.03
PDE4D-217ENST00000509355 ZNF56Q15929 161 aa2.34□□□□□ -2.03
PDE4D-217ENST00000509355 KRTAP6-3Q3LI67 103 aa2.34□□□□□ -2.03
PDE4D-217ENST00000509355 PYDC2Q56P42 97 aa2.34□□□□□ -2.03
PDE4D-217ENST00000509355 ALKAL2Q6UX46 152 aa2.34□□□□□ -2.03
PDE4D-217ENST00000509355 FP248Q71RG6 208 aaPredicted RBP2.34□□□□□ -2.03
PDE4D-217ENST00000509355 TMEM242Q9NWH2 141 aa2.34□□□□□ -2.03
PDE4D-217ENST00000509355 NHP2Q9NX24 153 aaKnown RBP2.34□□□□□ -2.03
PDE4D-217ENST00000509355 TRBV6-1A0A0K0K1D8 114 aa2.33□□□□□ -2.04
PDE4D-217ENST00000509355 TRBV10-2A0A0K0K1G8 114 aa2.33□□□□□ -2.04
PDE4D-217ENST00000509355 UBE2L5PA0A1B0GUS4 154 aa2.33□□□□□ -2.04
PDE4D-217ENST00000509355 LYRM1O43325 122 aa2.33□□□□□ -2.04
PDE4D-217ENST00000509355 UBE2L3P68036 154 aaKnown RBP2.33□□□□□ -2.04
PDE4D-217ENST00000509355 TVP23CQ96ET8 276 aa2.33□□□□□ -2.04
PDE4D-217ENST00000509355 UBE2D4Q9Y2X8 147 aa2.33□□□□□ -2.04
PDE4D-217ENST00000509355 IGKV2D-26A0A0A0MRZ7 120 aa2.32□□□□□ -2.04
PDE4D-217ENST00000509355 TRBV7-7A0A0K0K1E9 115 aa2.32□□□□□ -2.04
PDE4D-217ENST00000509355 H3BVH4 76 aa2.32□□□□□ -2.04
PDE4D-217ENST00000509355 ATOX1O00244 68 aa2.32□□□□□ -2.04
PDE4D-217ENST00000509355 KRTAP19-2Q3LHN2 52 aa2.32□□□□□ -2.04
PDE4D-217ENST00000509355 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
PDE4D-217ENST00000509355 SOSTDC1Q6X4U4 206 aa2.32□□□□□ -2.04
PDE4D-217ENST00000509355 ATP11AUNQ6ZP68 121 aa2.32□□□□□ -2.04
PDE4D-217ENST00000509355 ST20Q9HBF5 79 aa2.32□□□□□ -2.04
PDE4D-217ENST00000509355 ARMS2P0C7Q2 107 aa2.31□□□□□ -2.04
PDE4D-217ENST00000509355 CKS2P33552 79 aa2.31□□□□□ -2.04
PDE4D-217ENST00000509355 HINT1P49773 126 aaPredicted RBP2.31□□□□□ -2.04
PDE4D-217ENST00000509355 KRTDAPP60985 99 aa2.31□□□□□ -2.04
PDE4D-217ENST00000509355 Q8NDZ9 215 aa2.31□□□□□ -2.04
PDE4D-217ENST00000509355 CLEC2BQ92478 149 aa2.31□□□□□ -2.04
PDE4D-217ENST00000509355 PMCHL2Q9BQD1 86 aa2.31□□□□□ -2.04
PDE4D-217ENST00000509355 NEBP20929 6669 aa2.31□□□□□ -2.04
PDE4D-217ENST00000509355 H3BRM9 83 aa2.3□□□□□ -2.04
PDE4D-217ENST00000509355 TIMM17BO60830 172 aa2.3□□□□□ -2.04
PDE4D-217ENST00000509355 MOBPQ13875 183 aa2.3□□□□□ -2.04
PDE4D-217ENST00000509355 C5orf38Q86SI9 138 aa2.3□□□□□ -2.04
PDE4D-217ENST00000509355 FAM167A-AS1Q96KT0 104 aa2.3□□□□□ -2.04
PDE4D-217ENST00000509355 NDUFA12Q9UI09 145 aa2.3□□□□□ -2.04
PDE4D-217ENST00000509355 C17orf112F2Z3M2 114 aa2.29□□□□□ -2.04
PDE4D-217ENST00000509355 IGLC3P0DOY3 106 aa2.29□□□□□ -2.04
PDE4D-217ENST00000509355 HRES1P13985 223 aa2.29□□□□□ -2.04
PDE4D-217ENST00000509355 KRTAP13-2Q52LG2 175 aa2.29□□□□□ -2.04
PDE4D-217ENST00000509355 PPDPFLQ8WWR9 84 aa2.29□□□□□ -2.04
PDE4D-217ENST00000509355 DSCR8Q96T75 97 aa2.29□□□□□ -2.04
PDE4D-217ENST00000509355 SPCS1Q9Y6A9 102 aa2.29□□□□□ -2.04
PDE4D-217ENST00000509355 HMSDA8MTL9 139 aa2.28□□□□□ -2.04
PDE4D-217ENST00000509355 NUPR1O60356 82 aa2.28□□□□□ -2.04
PDE4D-217ENST00000509355 IGKCP01834 107 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms