RNA–Protein interactions for RNA: ENST00000509281.1

SNX2-208, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-208ENST00000509281 TEX261Q6UWH6 196 aa0.67□□□□□ -2.3
SNX2-208ENST00000509281 SMIM15Q7Z3B0 74 aa0.67□□□□□ -2.3
SNX2-208ENST00000509281 KCNRGQ8N5I3 272 aa0.67□□□□□ -2.3
SNX2-208ENST00000509281 FAM213BQ8TBF2 198 aa0.67□□□□□ -2.3
SNX2-208ENST00000509281 PSMG3Q9BT73 122 aaPredicted RBP0.67□□□□□ -2.3
SNX2-208ENST00000509281 CCDC32Q9BV29 185 aa0.67□□□□□ -2.3
SNX2-208ENST00000509281 MAP1LC3BQ9GZQ8 125 aa0.67□□□□□ -2.3
SNX2-208ENST00000509281 BATF3Q9NR55 127 aa0.67□□□□□ -2.3
SNX2-208ENST00000509281 UBE2D4Q9Y2X8 147 aa0.67□□□□□ -2.3
SNX2-208ENST00000509281 MUC17Q685J3 4493 aa0.67□□□□□ -2.3
SNX2-208ENST00000509281 MUC5ACP98088 5654 aa0.67□□□□□ -2.3
SNX2-208ENST00000509281 USH2AO75445 5202 aa0.67□□□□□ -2.3
SNX2-208ENST00000509281 FXYD6-FXYD2A0A087WZ82 144 aa0.66□□□□□ -2.3
SNX2-208ENST00000509281 IGKV3D-7A0A0C4DH55 119 aa0.66□□□□□ -2.3
SNX2-208ENST00000509281 TRBV30A0A0K0K1B3 111 aa0.66□□□□□ -2.3
SNX2-208ENST00000509281 TRBV27A0A0K0K1C4 114 aa0.66□□□□□ -2.3
SNX2-208ENST00000509281 C7orf77A4D0Y5 90 aa0.66□□□□□ -2.3
SNX2-208ENST00000509281 PFDN1O60925 122 aa0.66□□□□□ -2.3
SNX2-208ENST00000509281 SPINK1P00995 79 aa0.66□□□□□ -2.3
SNX2-208ENST00000509281 HIST1H2BOP23527 126 aa0.66□□□□□ -2.3
SNX2-208ENST00000509281 CKS2P33552 79 aa0.66□□□□□ -2.3
SNX2-208ENST00000509281 HIST1H2BBP33778 126 aa0.66□□□□□ -2.3
SNX2-208ENST00000509281 GNG4P50150 75 aa0.66□□□□□ -2.3
SNX2-208ENST00000509281 HIST1H2BDP58876 126 aa0.66□□□□□ -2.3
SNX2-208ENST00000509281 HIST1H2BCP62807 126 aa0.66□□□□□ -2.3
SNX2-208ENST00000509281 HIST2H2BEQ16778 126 aa0.66□□□□□ -2.3
SNX2-208ENST00000509281 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.66□□□□□ -2.3
SNX2-208ENST00000509281 HRCT1Q6UXD1 115 aa0.66□□□□□ -2.3
SNX2-208ENST00000509281 Q6ZUT4 128 aa0.66□□□□□ -2.3
SNX2-208ENST00000509281 SSBP3-AS1Q7Z2R9 100 aa0.66□□□□□ -2.3
SNX2-208ENST00000509281 HIST1H2BHQ93079 126 aa0.66□□□□□ -2.3
SNX2-208ENST00000509281 HIST1H2BNQ99877 126 aa0.66□□□□□ -2.3
SNX2-208ENST00000509281 HIST1H2BMQ99879 126 aa0.66□□□□□ -2.3
SNX2-208ENST00000509281 TMEM126AQ9H061 195 aa0.66□□□□□ -2.3
SNX2-208ENST00000509281 TMEM191AQ9H0A3 160 aa0.66□□□□□ -2.3
SNX2-208ENST00000509281 GNG13Q9P2W3 67 aa0.66□□□□□ -2.3
SNX2-208ENST00000509281 FAM236DA0A1B0GTK5 79 aa0.65□□□□□ -2.31
SNX2-208ENST00000509281 A0A1B0GUT8 65 aa0.65□□□□□ -2.31
SNX2-208ENST00000509281 M0R378 163 aa0.65□□□□□ -2.31
SNX2-208ENST00000509281 ARPC5O15511 151 aa0.65□□□□□ -2.31
SNX2-208ENST00000509281 ERC2-IT1O76042 136 aa0.65□□□□□ -2.31
SNX2-208ENST00000509281 FAM236CP0DP71 79 aa0.65□□□□□ -2.31
SNX2-208ENST00000509281 CEBPGP53567 150 aa0.65□□□□□ -2.31
SNX2-208ENST00000509281 HBBP68871 147 aa0.65□□□□□ -2.31
SNX2-208ENST00000509281 MRPS36P82909 103 aaKnown RBP0.65□□□□□ -2.31
SNX2-208ENST00000509281 KRTAP20-1Q3LI63 56 aa0.65□□□□□ -2.31
SNX2-208ENST00000509281 BORCS7Q96B45 105 aa0.65□□□□□ -2.31
SNX2-208ENST00000509281 SPRR4Q96PI1 79 aa0.65□□□□□ -2.31
SNX2-208ENST00000509281 TCEAL7Q9BRU2 100 aa0.65□□□□□ -2.31
SNX2-208ENST00000509281 CNFNQ9BYD5 112 aa0.65□□□□□ -2.31
SNX2-208ENST00000509281 BIN3Q9NQY0 253 aa0.65□□□□□ -2.31
SNX2-208ENST00000509281 LINC00846Q9NV44 126 aa0.65□□□□□ -2.31
SNX2-208ENST00000509281 CDKN2A-AS1Q9UH64 79 aa0.65□□□□□ -2.31
SNX2-208ENST00000509281 NDUFA12Q9UI09 145 aa0.65□□□□□ -2.31
SNX2-208ENST00000509281 IGIPA6NJ69 53 aa0.64□□□□□ -2.31
SNX2-208ENST00000509281 HIGD1CA8MV81 97 aa0.64□□□□□ -2.31
SNX2-208ENST00000509281 UMAD1C9J7I0 102 aa0.64□□□□□ -2.31
SNX2-208ENST00000509281 D6R8Y8 96 aa0.64□□□□□ -2.31
SNX2-208ENST00000509281 F8VRH5 84 aa0.64□□□□□ -2.31
SNX2-208ENST00000509281 PDE6DO43924 150 aa0.64□□□□□ -2.31
SNX2-208ENST00000509281 PPP1R17O96001 155 aa0.64□□□□□ -2.31
SNX2-208ENST00000509281 MT2AP02795 61 aa0.64□□□□□ -2.31
SNX2-208ENST00000509281 MT1FP04733 61 aa0.64□□□□□ -2.31
SNX2-208ENST00000509281 SPINK8P0C7L1 97 aa0.64□□□□□ -2.31
SNX2-208ENST00000509281 IFI27P40305 119 aaPredicted RBP0.64□□□□□ -2.31
SNX2-208ENST00000509281 LINC00158P58513 81 aa0.64□□□□□ -2.31
SNX2-208ENST00000509281 KRTAP19-6Q3LI70 58 aa0.64□□□□□ -2.31
SNX2-208ENST00000509281 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.64□□□□□ -2.31
SNX2-208ENST00000509281 AKAP14Q86UN6 197 aa0.64□□□□□ -2.31
SNX2-208ENST00000509281 Q8IZM0 81 aa0.64□□□□□ -2.31
SNX2-208ENST00000509281 COX7B2Q8TF08 81 aa0.64□□□□□ -2.31
SNX2-208ENST00000509281 S100ZQ8WXG8 99 aa0.64□□□□□ -2.31
SNX2-208ENST00000509281 TOMM6Q96B49 74 aa0.64□□□□□ -2.31
SNX2-208ENST00000509281 TMEM141Q96I45 108 aa0.64□□□□□ -2.31
SNX2-208ENST00000509281 AMELXQ99217 191 aa0.64□□□□□ -2.31
SNX2-208ENST00000509281 C20orf78Q9BR46 151 aa0.64□□□□□ -2.31
SNX2-208ENST00000509281 MANBALQ9NQG1 85 aa0.64□□□□□ -2.31
SNX2-208ENST00000509281 SPANXA1Q9NS26 97 aa0.64□□□□□ -2.31
SNX2-208ENST00000509281 TRAV9-1A0A075B6T8 112 aa0.63□□□□□ -2.31
SNX2-208ENST00000509281 ETDCA0A1B0GVM5 59 aa0.63□□□□□ -2.31
SNX2-208ENST00000509281 KANTRA0A1W2PQU2 76 aa0.63□□□□□ -2.31
SNX2-208ENST00000509281 C20orf202A1L168 122 aa0.63□□□□□ -2.31
SNX2-208ENST00000509281 KRTAP2-3P0C7H8 128 aa0.63□□□□□ -2.31
SNX2-208ENST00000509281 ADCYAP1P18509 176 aa0.63□□□□□ -2.31
SNX2-208ENST00000509281 NDUFA6P56556 154 aa0.63□□□□□ -2.31
SNX2-208ENST00000509281 SEC11AP67812 179 aa0.63□□□□□ -2.31
SNX2-208ENST00000509281 NDUFA5Q16718 116 aa0.63□□□□□ -2.31
SNX2-208ENST00000509281 C9orf153Q5TBE3 101 aa0.63□□□□□ -2.31
SNX2-208ENST00000509281 MRPL54Q6P161 138 aaKnown RBP0.63□□□□□ -2.31
SNX2-208ENST00000509281 ATP11AUNQ6ZP68 121 aa0.63□□□□□ -2.31
SNX2-208ENST00000509281 Q8N8P6 123 aa0.63□□□□□ -2.31
SNX2-208ENST00000509281 DEFB105AQ8NG35 78 aa0.63□□□□□ -2.31
SNX2-208ENST00000509281 PRELID3AQ96N28 172 aa0.63□□□□□ -2.31
SNX2-208ENST00000509281 SCGB3A1Q96QR1 104 aa0.63□□□□□ -2.31
SNX2-208ENST00000509281 C2orf88Q9BSF0 95 aa0.63□□□□□ -2.31
SNX2-208ENST00000509281 SMIM2Q9BVW6 85 aa0.63□□□□□ -2.31
SNX2-208ENST00000509281 KRTAP2-4Q9BYR9 128 aa0.63□□□□□ -2.31
SNX2-208ENST00000509281 OSTCQ9NRP0 149 aa0.63□□□□□ -2.31
SNX2-208ENST00000509281 V9GYV3 84 aa0.63□□□□□ -2.31
SNX2-208ENST00000509281 TRBV10-3A0A0K0K1G6 114 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 1009.6 ms