RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 LELP1Q5T871 98 aa6.4□□□□□ -1.38
PDGFRA-207ENST00000509092 NSD1Q96L73 2696 aaPredicted RBP6.4□□□□□ -1.39
PDGFRA-207ENST00000509092 PLA2G1BP04054 148 aaKnown RBP6.39□□□□□ -1.39
PDGFRA-207ENST00000509092 SMR3AQ99954 134 aa6.39□□□□□ -1.39
PDGFRA-207ENST00000509092 MAST4O15021 2626 aa6.39□□□□□ -1.39
PDGFRA-207ENST00000509092 NF1P21359 2839 aa6.38□□□□□ -1.39
PDGFRA-207ENST00000509092 ANK3Q12955 4377 aaKnown RBP6.38□□□□□ -1.39
PDGFRA-207ENST00000509092 KRTAP4-16G5E9R7 235 aaPredicted RBP6.38□□□□□ -1.39
PDGFRA-207ENST00000509092 LINC00476Q8WZB0 136 aa6.38□□□□□ -1.39
PDGFRA-207ENST00000509092 MDFIQ99750 246 aa6.38□□□□□ -1.39
PDGFRA-207ENST00000509092 ASB16-AS1Q495Z4 193 aa6.37□□□□□ -1.39
PDGFRA-207ENST00000509092 PRR26Q8N8Z3 221 aa6.37□□□□□ -1.39
PDGFRA-207ENST00000509092 X6R8D5 127 aa6.37□□□□□ -1.39
PDGFRA-207ENST00000509092 CUBNO60494 3623 aa6.37□□□□□ -1.39
PDGFRA-207ENST00000509092 IGLV5-37A0A075B6J1 123 aa6.36□□□□□ -1.39
PDGFRA-207ENST00000509092 IGLV1-51P01701 117 aa6.36□□□□□ -1.39
PDGFRA-207ENST00000509092 TEP1Q99973 2627 aaKnown RBP6.36□□□□□ -1.39
PDGFRA-207ENST00000509092 JMJD1CQ15652 2540 aa6.36□□□□□ -1.39
PDGFRA-207ENST00000509092 RPL37AP61513 92 aaKnown RBP6.36□□□□□ -1.39
PDGFRA-207ENST00000509092 SERTAD4-AS1Q5TG53 156 aa6.36□□□□□ -1.39
PDGFRA-207ENST00000509092 SPRR1AP35321 89 aa6.35□□□□□ -1.39
PDGFRA-207ENST00000509092 Q8NAQ8 132 aa6.35□□□□□ -1.39
PDGFRA-207ENST00000509092 FN1P02751 2386 aaKnown RBP6.35□□□□□ -1.39
PDGFRA-207ENST00000509092 NIPBLQ6KC79 2804 aaeCLIP6.34□□□□□ -1.39
PDGFRA-207ENST00000509092 IGLV1-50A0A075B6I6 118 aa6.34□□□□□ -1.39
PDGFRA-207ENST00000509092 IGFL1Q6UW32 110 aa6.34□□□□□ -1.39
PDGFRA-207ENST00000509092 ADM2Q7Z4H4 148 aa6.34□□□□□ -1.39
PDGFRA-207ENST00000509092 C15orf56Q8N910 161 aa6.34□□□□□ -1.39
PDGFRA-207ENST00000509092 SETD2Q9BYW2 2564 aaPredicted RBP6.33□□□□□ -1.4
PDGFRA-207ENST00000509092 A0A087WSZ3 146 aa6.33□□□□□ -1.4
PDGFRA-207ENST00000509092 KRTAP26-1Q6PEX3 210 aa6.33□□□□□ -1.4
PDGFRA-207ENST00000509092 A0A087X002 238 aa6.33□□□□□ -1.4
PDGFRA-207ENST00000509092 PLA2G2DQ9UNK4 145 aa6.32□□□□□ -1.4
PDGFRA-207ENST00000509092 PCOTHQ58A44 107 aa6.31□□□□□ -1.4
PDGFRA-207ENST00000509092 A0A0G2JQZ4 141 aa6.31□□□□□ -1.4
PDGFRA-207ENST00000509092 A0A1W2PNN7 141 aa6.31□□□□□ -1.4
PDGFRA-207ENST00000509092 RPL37AP8A6NKH3 93 aa6.31□□□□□ -1.4
PDGFRA-207ENST00000509092 A8MWP4 228 aa6.31□□□□□ -1.4
PDGFRA-207ENST00000509092 INAFM1C9JVW0 142 aa6.3□□□□□ -1.4
PDGFRA-207ENST00000509092 HRES1P13985 223 aa6.3□□□□□ -1.4
PDGFRA-207ENST00000509092 IGLV8-61A0A075B6I0 122 aa6.29□□□□□ -1.4
PDGFRA-207ENST00000509092 RTL8CO15255 209 aa6.28□□□□□ -1.4
PDGFRA-207ENST00000509092 DEFB4AO15263 64 aa6.27□□□□□ -1.41
PDGFRA-207ENST00000509092 MMP24-AS1A0A0U1RRL7 71 aa6.26□□□□□ -1.41
PDGFRA-207ENST00000509092 TLX1NBP0CAT3 122 aa6.25□□□□□ -1.41
PDGFRA-207ENST00000509092 TP53AIP1Q9HCN2 124 aa6.25□□□□□ -1.41
PDGFRA-207ENST00000509092 HTN3P15516 51 aa6.25□□□□□ -1.41
PDGFRA-207ENST00000509092 LINC00472Q9H8W2 130 aa6.25□□□□□ -1.41
PDGFRA-207ENST00000509092 Q6ZR54 194 aa6.24□□□□□ -1.41
PDGFRA-207ENST00000509092 ATRQ13535 2644 aa6.24□□□□□ -1.41
PDGFRA-207ENST00000509092 DEFB131BA0A096LNP1 70 aa6.24□□□□□ -1.41
PDGFRA-207ENST00000509092 FAM168BA1KXE4 195 aa6.24□□□□□ -1.41
PDGFRA-207ENST00000509092 IGKV2-24A0A0C4DH68 120 aa6.23□□□□□ -1.41
PDGFRA-207ENST00000509092 RETNLBQ9BQ08 111 aa6.21□□□□□ -1.41
PDGFRA-207ENST00000509092 DEFB135Q30KP9 77 aa6.21□□□□□ -1.42
PDGFRA-207ENST00000509092 REG3GQ6UW15 175 aa6.21□□□□□ -1.42
PDGFRA-207ENST00000509092 NBEAL2Q6ZNJ1 2754 aa6.21□□□□□ -1.42
PDGFRA-207ENST00000509092 H0Y9J4 135 aa6.2□□□□□ -1.42
PDGFRA-207ENST00000509092 KRTAP7-1Q8IUC3 87 aa6.2□□□□□ -1.42
PDGFRA-207ENST00000509092 SPART-AS1P0CW21 52 aa6.19□□□□□ -1.42
PDGFRA-207ENST00000509092 SPATA8Q6RVD6 105 aa6.19□□□□□ -1.42
PDGFRA-207ENST00000509092 TENM1Q9UKZ4 2725 aa6.19□□□□□ -1.42
PDGFRA-207ENST00000509092 CSAG1Q6PB30 78 aa6.18□□□□□ -1.42
PDGFRA-207ENST00000509092 ALMS1Q8TCU4 4167 aa6.17□□□□□ -1.42
PDGFRA-207ENST00000509092 FBN1P35555 2871 aaKnown RBP6.15□□□□□ -1.42
PDGFRA-207ENST00000509092 COL6A5A8TX70 2615 aa6.15□□□□□ -1.43
PDGFRA-207ENST00000509092 STAB1Q9NY15 2570 aa6.14□□□□□ -1.43
PDGFRA-207ENST00000509092 PRLHP81277 87 aa6.13□□□□□ -1.43
PDGFRA-207ENST00000509092 A0A1B0GU69 56 aa6.12□□□□□ -1.43
PDGFRA-207ENST00000509092 KRTAP10-3P60369 221 aa6.12□□□□□ -1.43
PDGFRA-207ENST00000509092 C8orf17Q9NRJ1 99 aa6.12□□□□□ -1.43
PDGFRA-207ENST00000509092 VWFP04275 2813 aa6.12□□□□□ -1.43
PDGFRA-207ENST00000509092 TENM2Q9NT68 2774 aa6.12□□□□□ -1.43
PDGFRA-207ENST00000509092 H3BNG1 76 aa6.11□□□□□ -1.43
PDGFRA-207ENST00000509092 ACYP2P14621 99 aa6.11□□□□□ -1.43
PDGFRA-207ENST00000509092 MIR22HGQ0VDD5 57 aa6.11□□□□□ -1.43
PDGFRA-207ENST00000509092 SPRR1BP22528 89 aa6.11□□□□□ -1.43
PDGFRA-207ENST00000509092 KRTAP24-1Q3LI83 254 aa6.11□□□□□ -1.43
PDGFRA-207ENST00000509092 LINC01556Q5JQF7 62 aa6.11□□□□□ -1.43
PDGFRA-207ENST00000509092 UQCR11O14957 56 aa6.09□□□□□ -1.43
PDGFRA-207ENST00000509092 TRRAPQ9Y4A5 3859 aa6.08□□□□□ -1.44
PDGFRA-207ENST00000509092 Q96NJ1 140 aa6.08□□□□□ -1.44
PDGFRA-207ENST00000509092 ZNF706Q9Y5V0 76 aaPredicted RBP6.08□□□□□ -1.44
PDGFRA-207ENST00000509092 C1orf134Q5TEV5 83 aa6.07□□□□□ -1.44
PDGFRA-207ENST00000509092 MRPL34Q9BQ48 92 aaKnown RBP6.06□□□□□ -1.44
PDGFRA-207ENST00000509092 A0A1B0GVX0 72 aa6.05□□□□□ -1.44
PDGFRA-207ENST00000509092 ZNF861PO60384 105 aa6.04□□□□□ -1.44
PDGFRA-207ENST00000509092 PKD1L1Q8TDX9 2849 aa6.04□□□□□ -1.44
PDGFRA-207ENST00000509092 DMAC1Q96GE9 116 aa6.04□□□□□ -1.44
PDGFRA-207ENST00000509092 IGHV6-1A0A0B4J1U7 121 aa6.03□□□□□ -1.44
PDGFRA-207ENST00000509092 ROMO1P60602 79 aa6.01□□□□□ -1.45
PDGFRA-207ENST00000509092 DNAH10OSP0CZ25 163 aa6.01□□□□□ -1.45
PDGFRA-207ENST00000509092 CASC10Q5T4H9 136 aa6.01□□□□□ -1.45
PDGFRA-207ENST00000509092 A0A096LNI7 61 aa6□□□□□ -1.45
PDGFRA-207ENST00000509092 K7EIL1 84 aa6□□□□□ -1.45
PDGFRA-207ENST00000509092 KRTAP13-3Q3SY46 172 aa6□□□□□ -1.45
PDGFRA-207ENST00000509092 CDK2AP2O75956 126 aa5.99□□□□□ -1.45
PDGFRA-207ENST00000509092 ANK2Q01484 3957 aa5.98□□□□□ -1.45
PDGFRA-207ENST00000509092 Q5W150 140 aa5.97□□□□□ -1.45
PDGFRA-207ENST00000509092 KRTAP25-1Q3LHN0 102 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms