RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 FCGBPQ9Y6R7 5405 aaPredicted RBP4.53□□□□□ -1.68
COL4A3BP-206ENST00000508809 A0A0J9YXY3 114 aa4.52□□□□□ -1.69
COL4A3BP-206ENST00000508809 PLNP26678 52 aa4.52□□□□□ -1.69
COL4A3BP-206ENST00000508809 PRO1933Q9H354 126 aa4.52□□□□□ -1.69
COL4A3BP-206ENST00000508809 LEPROTL1O95214 131 aa4.51□□□□□ -1.69
COL4A3BP-206ENST00000508809 LGALS3P17931 250 aaKnown RBP4.51□□□□□ -1.69
COL4A3BP-206ENST00000508809 HERVK_113P61574 105 aa4.51□□□□□ -1.69
COL4A3BP-206ENST00000508809 V9GYY9 64 aa4.51□□□□□ -1.69
COL4A3BP-206ENST00000508809 TEX49A0A1B0GTD5 131 aa4.5□□□□□ -1.69
COL4A3BP-206ENST00000508809 H7C2G1 150 aa4.5□□□□□ -1.69
COL4A3BP-206ENST00000508809 DPM2O94777 84 aa4.5□□□□□ -1.69
COL4A3BP-206ENST00000508809 AKR1D1P51857 326 aa4.5□□□□□ -1.69
COL4A3BP-206ENST00000508809 ELOF1P60002 83 aaKnown RBP4.5□□□□□ -1.69
COL4A3BP-206ENST00000508809 NPC2P61916 151 aa4.5□□□□□ -1.69
COL4A3BP-206ENST00000508809 SPANXCQ9NY87 97 aa4.5□□□□□ -1.69
COL4A3BP-206ENST00000508809 IGKCP01834 107 aa4.49□□□□□ -1.69
COL4A3BP-206ENST00000508809 TAL2Q16559 108 aa4.49□□□□□ -1.69
COL4A3BP-206ENST00000508809 Q1RN00 199 aa4.49□□□□□ -1.69
COL4A3BP-206ENST00000508809 LCE1FQ5T754 118 aa4.49□□□□□ -1.69
COL4A3BP-206ENST00000508809 MTURNQ8N3F0 131 aa4.49□□□□□ -1.69
COL4A3BP-206ENST00000508809 LINC00308Q8TCZ7 52 aa4.49□□□□□ -1.69
COL4A3BP-206ENST00000508809 E9PLD3 99 aa4.48□□□□□ -1.69
COL4A3BP-206ENST00000508809 SNAPINO95295 136 aa4.48□□□□□ -1.69
COL4A3BP-206ENST00000508809 APOC3P02656 99 aa4.48□□□□□ -1.69
COL4A3BP-206ENST00000508809 COX7BP24311 80 aa4.48□□□□□ -1.69
COL4A3BP-206ENST00000508809 KRTAP10-12P60413 245 aa4.48□□□□□ -1.69
COL4A3BP-206ENST00000508809 OR13C6PQ8NH95 151 aa4.48□□□□□ -1.69
COL4A3BP-206ENST00000508809 PMCHL2Q9BQD1 86 aa4.48□□□□□ -1.69
COL4A3BP-206ENST00000508809 SPANXDQ9BXN6 97 aa4.48□□□□□ -1.69
COL4A3BP-206ENST00000508809 TRBV7-6A0A0J9YX20 115 aa4.47□□□□□ -1.69
COL4A3BP-206ENST00000508809 TIMM17BO60830 172 aa4.47□□□□□ -1.69
COL4A3BP-206ENST00000508809 C6orf99Q4VX62 202 aa4.47□□□□□ -1.69
COL4A3BP-206ENST00000508809 SVBPQ8N300 66 aa4.47□□□□□ -1.69
COL4A3BP-206ENST00000508809 DEFB105AQ8NG35 78 aa4.47□□□□□ -1.69
COL4A3BP-206ENST00000508809 FAM218AQ96MZ4 157 aa4.47□□□□□ -1.69
COL4A3BP-206ENST00000508809 HSPB8Q9UJY1 196 aa4.47□□□□□ -1.69
COL4A3BP-206ENST00000508809 IGLV5-48A0A075B6I7 105 aa4.46□□□□□ -1.7
COL4A3BP-206ENST00000508809 SERF1AO75920 110 aa4.46□□□□□ -1.7
COL4A3BP-206ENST00000508809 A0A0G2JQZ4 141 aa4.45□□□□□ -1.7
COL4A3BP-206ENST00000508809 TCL1BO95988 128 aa4.44□□□□□ -1.7
COL4A3BP-206ENST00000508809 TRGC2P03986 189 aa4.44□□□□□ -1.7
COL4A3BP-206ENST00000508809 FABP4P15090 132 aa4.44□□□□□ -1.7
COL4A3BP-206ENST00000508809 NDUFA5Q16718 116 aa4.44□□□□□ -1.7
COL4A3BP-206ENST00000508809 A0A1B0GWB2 263 aa4.43□□□□□ -1.7
COL4A3BP-206ENST00000508809 Q6Q795 121 aa4.42□□□□□ -1.7
COL4A3BP-206ENST00000508809 ATP11AUNQ6ZP68 121 aa4.41□□□□□ -1.7
COL4A3BP-206ENST00000508809 PRAC1Q96KF2 57 aa4.41□□□□□ -1.7
COL4A3BP-206ENST00000508809 SYNE2Q8WXH0 6885 aaKnown RBP4.41□□□□□ -1.7
COL4A3BP-206ENST00000508809 MACF1Q9UPN3 7388 aaKnown RBP4.4□□□□□ -1.71
COL4A3BP-206ENST00000508809 ZNF815PA8K554 130 aa4.39□□□□□ -1.71
COL4A3BP-206ENST00000508809 SYS1-DBNDD2H3BUS1 97 aa4.39□□□□□ -1.71
COL4A3BP-206ENST00000508809 C20orf202A1L168 122 aa4.38□□□□□ -1.71
COL4A3BP-206ENST00000508809 PCP2Q8IVA1 136 aa4.38□□□□□ -1.71
COL4A3BP-206ENST00000508809 OBSCN-AS1Q96MR7 158 aa4.38□□□□□ -1.71
COL4A3BP-206ENST00000508809 TTTY13Q9BZ97 58 aa4.38□□□□□ -1.71
COL4A3BP-206ENST00000508809 KRTAP16-1A8MUX0 517 aa4.37□□□□□ -1.71
COL4A3BP-206ENST00000508809 IFITM1P13164 125 aa4.37□□□□□ -1.71
COL4A3BP-206ENST00000508809 LINC01545Q5VT33 79 aa4.37□□□□□ -1.71
COL4A3BP-206ENST00000508809 NHP2Q9NX24 153 aaKnown RBP4.37□□□□□ -1.71
COL4A3BP-206ENST00000508809 TRBV7-7A0A0K0K1E9 115 aa4.36□□□□□ -1.71
COL4A3BP-206ENST00000508809 A6NDN8 102 aa4.36□□□□□ -1.71
COL4A3BP-206ENST00000508809 Q6JHZ5 121 aa4.36□□□□□ -1.71
COL4A3BP-206ENST00000508809 COPS9Q8WXC6 57 aa4.36□□□□□ -1.71
COL4A3BP-206ENST00000508809 COLCA2A8K830 154 aa4.35□□□□□ -1.71
COL4A3BP-206ENST00000508809 Q6ZVH6 145 aa4.35□□□□□ -1.71
COL4A3BP-206ENST00000508809 SMIM11BQ8TCY0 68 aa4.35□□□□□ -1.71
COL4A3BP-206ENST00000508809 F8WEM9 126 aa4.34□□□□□ -1.71
COL4A3BP-206ENST00000508809 MT2AP02795 61 aa4.34□□□□□ -1.71
COL4A3BP-206ENST00000508809 IGFL1Q6UW32 110 aa4.34□□□□□ -1.71
COL4A3BP-206ENST00000508809 MUSTN1Q8IVN3 82 aa4.34□□□□□ -1.71
COL4A3BP-206ENST00000508809 CLEC2BQ92478 149 aa4.34□□□□□ -1.71
COL4A3BP-206ENST00000508809 C20orf166-AS1Q96NR2 134 aa4.34□□□□□ -1.71
COL4A3BP-206ENST00000508809 TRAV13-2A0A0B4J235 113 aa4.33□□□□□ -1.72
COL4A3BP-206ENST00000508809 A8MUU9 505 aa4.33□□□□□ -1.72
COL4A3BP-206ENST00000508809 OCIAD2Q56VL3 154 aa4.33□□□□□ -1.72
COL4A3BP-206ENST00000508809 LINC00575Q6W349 94 aa4.33□□□□□ -1.72
COL4A3BP-206ENST00000508809 SCGB1D4Q6XE38 83 aa4.33□□□□□ -1.72
COL4A3BP-206ENST00000508809 Q96NJ1 140 aa4.33□□□□□ -1.72
COL4A3BP-206ENST00000508809 TRBV20-1A0A075B6N2 111 aa4.32□□□□□ -1.72
COL4A3BP-206ENST00000508809 LST1O00453 97 aa4.31□□□□□ -1.72
COL4A3BP-206ENST00000508809 MT1FP04733 61 aa4.31□□□□□ -1.72
COL4A3BP-206ENST00000508809 Q6ZQY7 126 aa4.31□□□□□ -1.72
COL4A3BP-206ENST00000508809 hADV29S1A0JD25 119 aa4.3□□□□□ -1.72
COL4A3BP-206ENST00000508809 C3orf79P0CE67 100 aa4.3□□□□□ -1.72
COL4A3BP-206ENST00000508809 DSCR10P59022 87 aa4.3□□□□□ -1.72
COL4A3BP-206ENST00000508809 HIST1H2BKO60814 126 aa4.29□□□□□ -1.72
COL4A3BP-206ENST00000508809 HIST1H2BJP06899 126 aa4.29□□□□□ -1.72
COL4A3BP-206ENST00000508809 HIST1H2BOP23527 126 aa4.29□□□□□ -1.72
COL4A3BP-206ENST00000508809 HIST1H2BBP33778 126 aa4.29□□□□□ -1.72
COL4A3BP-206ENST00000508809 HIST1H2BDP58876 126 aa4.29□□□□□ -1.72
COL4A3BP-206ENST00000508809 HIST1H2BCP62807 126 aa4.29□□□□□ -1.72
COL4A3BP-206ENST00000508809 HIST2H2BEQ16778 126 aa4.29□□□□□ -1.72
COL4A3BP-206ENST00000508809 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.29□□□□□ -1.72
COL4A3BP-206ENST00000508809 HIST1H2BHQ93079 126 aa4.29□□□□□ -1.72
COL4A3BP-206ENST00000508809 HIST1H2BNQ99877 126 aa4.29□□□□□ -1.72
COL4A3BP-206ENST00000508809 HIST1H2BMQ99879 126 aa4.29□□□□□ -1.72
COL4A3BP-206ENST00000508809 PPDPFLQ8WWR9 84 aa4.28□□□□□ -1.72
COL4A3BP-206ENST00000508809 KRTAP10-10P60014 251 aa4.27□□□□□ -1.73
COL4A3BP-206ENST00000508809 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.27□□□□□ -1.73
COL4A3BP-206ENST00000508809 SS18L2Q9UHA2 77 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms