RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 C20orf202A1L168 122 aa7.06□□□□□ -1.28
HMGCS1-205ENST00000508319 H7C2G1 150 aa7.06□□□□□ -1.28
HMGCS1-205ENST00000508319 PCP2Q8IVA1 136 aa7.06□□□□□ -1.28
HMGCS1-205ENST00000508319 A6NDN8 102 aa7.05□□□□□ -1.28
HMGCS1-205ENST00000508319 PCP4P48539 62 aa7.05□□□□□ -1.28
HMGCS1-205ENST00000508319 PCOTHQ58A44 107 aa7.05□□□□□ -1.28
HMGCS1-205ENST00000508319 Q5XG85 94 aa7.05□□□□□ -1.28
HMGCS1-205ENST00000508319 Q6ZVH6 145 aa7.05□□□□□ -1.28
HMGCS1-205ENST00000508319 MUSTN1Q8IVN3 82 aa7.05□□□□□ -1.28
HMGCS1-205ENST00000508319 A0A0G2JQZ4 141 aa7.04□□□□□ -1.28
HMGCS1-205ENST00000508319 IGLV8-61A0A075B6I0 122 aa7.03□□□□□ -1.28
HMGCS1-205ENST00000508319 AKR1D1P51857 326 aa7.03□□□□□ -1.28
HMGCS1-205ENST00000508319 A4D1N5 150 aa7.02□□□□□ -1.29
HMGCS1-205ENST00000508319 C1orf195Q5TG92 126 aa7.02□□□□□ -1.29
HMGCS1-205ENST00000508319 SMIM11BQ8TCY0 68 aa7.01□□□□□ -1.29
HMGCS1-205ENST00000508319 FSIP2Q5CZC0 6907 aa7.01□□□□□ -1.29
HMGCS1-205ENST00000508319 TRAV13-2A0A0B4J235 113 aa7□□□□□ -1.29
HMGCS1-205ENST00000508319 MT1HP80294 61 aa6.99□□□□□ -1.29
HMGCS1-205ENST00000508319 NHP2Q9NX24 153 aaKnown RBP6.99□□□□□ -1.29
HMGCS1-205ENST00000508319 SNRPEP62304 92 aaKnown RBP6.96□□□□□ -1.3
HMGCS1-205ENST00000508319 RPL37P61927 97 aaKnown RBP6.95□□□□□ -1.3
HMGCS1-205ENST00000508319 LINC00575Q6W349 94 aa6.94□□□□□ -1.3
HMGCS1-205ENST00000508319 HIST3H2BBQ8N257 126 aa6.94□□□□□ -1.3
HMGCS1-205ENST00000508319 F8WEM9 126 aa6.93□□□□□ -1.3
HMGCS1-205ENST00000508319 Q6ZQY7 126 aa6.93□□□□□ -1.3
HMGCS1-205ENST00000508319 HIST1H2BLQ99880 126 aa6.93□□□□□ -1.3
HMGCS1-205ENST00000508319 TCL1BO95988 128 aa6.92□□□□□ -1.3
HMGCS1-205ENST00000508319 VAMP3Q15836 100 aa6.92□□□□□ -1.3
HMGCS1-205ENST00000508319 FLGP20930 4061 aaPredicted RBP6.91□□□□□ -1.3
HMGCS1-205ENST00000508319 TRIAP1O43715 76 aa6.91□□□□□ -1.3
HMGCS1-205ENST00000508319 CFC1BP0CG36 223 aa6.91□□□□□ -1.3
HMGCS1-205ENST00000508319 hADV29S1A0JD25 119 aa6.9□□□□□ -1.3
HMGCS1-205ENST00000508319 HSBP1L1C9JCN9 74 aa6.9□□□□□ -1.3
HMGCS1-205ENST00000508319 CLEC2BQ92478 149 aa6.9□□□□□ -1.3
HMGCS1-205ENST00000508319 S100A2P29034 98 aa6.89□□□□□ -1.31
HMGCS1-205ENST00000508319 Q6JHZ5 121 aa6.89□□□□□ -1.31
HMGCS1-205ENST00000508319 IGFL1Q6UW32 110 aa6.89□□□□□ -1.31
HMGCS1-205ENST00000508319 CRCT1Q9UGL9 99 aa6.89□□□□□ -1.31
HMGCS1-205ENST00000508319 TRBV7-7A0A0K0K1E9 115 aa6.88□□□□□ -1.31
HMGCS1-205ENST00000508319 C9orf118A6NHY6 69 aa6.87□□□□□ -1.31
HMGCS1-205ENST00000508319 KRTAP10-6P60371 365 aaPredicted RBP6.87□□□□□ -1.31
HMGCS1-205ENST00000508319 C12orf57Q99622 126 aa6.87□□□□□ -1.31
HMGCS1-205ENST00000508319 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.86□□□□□ -1.31
HMGCS1-205ENST00000508319 OCIAD2Q56VL3 154 aa6.85□□□□□ -1.31
HMGCS1-205ENST00000508319 BVES-AS1Q5T3Y7 98 aa6.84□□□□□ -1.31
HMGCS1-205ENST00000508319 PPDPFLQ8WWR9 84 aa6.84□□□□□ -1.31
HMGCS1-205ENST00000508319 COX6B2Q6YFQ2 88 aa6.83□□□□□ -1.32
HMGCS1-205ENST00000508319 HIST1H4GQ99525 98 aa6.83□□□□□ -1.32
HMGCS1-205ENST00000508319 KRTAP4-11Q9BYQ6 195 aa6.83□□□□□ -1.32
HMGCS1-205ENST00000508319 H3BUT2 72 aa6.82□□□□□ -1.32
HMGCS1-205ENST00000508319 OBSCN-AS1Q96MR7 158 aa6.82□□□□□ -1.32
HMGCS1-205ENST00000508319 M0R2T5 61 aa6.81□□□□□ -1.32
HMGCS1-205ENST00000508319 S100A6P06703 90 aa6.81□□□□□ -1.32
HMGCS1-205ENST00000508319 COX8AP10176 69 aa6.81□□□□□ -1.32
HMGCS1-205ENST00000508319 Q75L30 129 aa6.81□□□□□ -1.32
HMGCS1-205ENST00000508319 DLEU1O43261 78 aa6.79□□□□□ -1.32
HMGCS1-205ENST00000508319 SNHG12Q9BXW3 62 aa6.79□□□□□ -1.32
HMGCS1-205ENST00000508319 CFC1P0CG37 223 aa6.78□□□□□ -1.32
HMGCS1-205ENST00000508319 LST1O00453 97 aa6.77□□□□□ -1.33
HMGCS1-205ENST00000508319 LCE4AQ5TA78 99 aa6.77□□□□□ -1.33
HMGCS1-205ENST00000508319 ATP11AUNQ6ZP68 121 aa6.77□□□□□ -1.33
HMGCS1-205ENST00000508319 Q6Q795 121 aa6.76□□□□□ -1.33
HMGCS1-205ENST00000508319 FAM218AQ96MZ4 157 aa6.76□□□□□ -1.33
HMGCS1-205ENST00000508319 A0A0B4J2C4 111 aa6.74□□□□□ -1.33
HMGCS1-205ENST00000508319 S100A1P23297 94 aa6.74□□□□□ -1.33
HMGCS1-205ENST00000508319 RAB37Q96AX2 223 aa6.74□□□□□ -1.33
HMGCS1-205ENST00000508319 C14orf144Q96I85 54 aa6.74□□□□□ -1.33
HMGCS1-205ENST00000508319 HIGD1BQ9P298 99 aa6.74□□□□□ -1.33
HMGCS1-205ENST00000508319 SS18L2Q9UHA2 77 aa6.74□□□□□ -1.33
HMGCS1-205ENST00000508319 Q96NJ1 140 aa6.73□□□□□ -1.33
HMGCS1-205ENST00000508319 H0YGX0 51 aa6.72□□□□□ -1.33
HMGCS1-205ENST00000508319 NDUFV3P56181 108 aaKnown RBP6.72□□□□□ -1.33
HMGCS1-205ENST00000508319 C2orf91Q6ZV80 131 aa6.72□□□□□ -1.33
HMGCS1-205ENST00000508319 TEN1Q86WV5 123 aa6.72□□□□□ -1.33
HMGCS1-205ENST00000508319 C20orf166-AS1Q96NR2 134 aa6.72□□□□□ -1.33
HMGCS1-205ENST00000508319 A0A087WSZ3 146 aa6.71□□□□□ -1.34
HMGCS1-205ENST00000508319 PAM16Q9Y3D7 125 aa6.71□□□□□ -1.34
HMGCS1-205ENST00000508319 A8MUU9 505 aa6.7□□□□□ -1.34
HMGCS1-205ENST00000508319 SNCGO76070 127 aa6.7□□□□□ -1.34
HMGCS1-205ENST00000508319 SPATA45Q537H7 98 aa6.7□□□□□ -1.34
HMGCS1-205ENST00000508319 A0A1B0GX51 115 aa6.68□□□□□ -1.34
HMGCS1-205ENST00000508319 H3BMG7 143 aa6.68□□□□□ -1.34
HMGCS1-205ENST00000508319 CEND1Q8N111 149 aa6.68□□□□□ -1.34
HMGCS1-205ENST00000508319 VAMP8Q9BV40 100 aa6.67□□□□□ -1.34
HMGCS1-205ENST00000508319 A0A1W2PNM2 257 aa6.66□□□□□ -1.34
HMGCS1-205ENST00000508319 FXYD2P54710 66 aa6.66□□□□□ -1.34
HMGCS1-205ENST00000508319 PRO1854Q9UHT4 67 aa6.66□□□□□ -1.34
HMGCS1-205ENST00000508319 FABP2P12104 132 aa6.65□□□□□ -1.34
HMGCS1-205ENST00000508319 DSCR10P59022 87 aa6.64□□□□□ -1.35
HMGCS1-205ENST00000508319 SIGMAR1Q99720 223 aa6.64□□□□□ -1.35
HMGCS1-205ENST00000508319 TRBV7-4A0A0J9YYF1 115 aa6.6□□□□□ -1.35
HMGCS1-205ENST00000508319 TRBV20-1A0A075B6N2 111 aa6.59□□□□□ -1.35
HMGCS1-205ENST00000508319 KRTAP16-1A8MUX0 517 aa6.59□□□□□ -1.35
HMGCS1-205ENST00000508319 KRTAP9-8Q9BYQ0 159 aa6.59□□□□□ -1.35
HMGCS1-205ENST00000508319 USH2AO75445 5202 aa6.58□□□□□ -1.36
HMGCS1-205ENST00000508319 A0A0A0MQY5 61 aa6.58□□□□□ -1.36
HMGCS1-205ENST00000508319 A0A1B0GV72 72 aa6.58□□□□□ -1.36
HMGCS1-205ENST00000508319 ANKRD29Q8N6D5 301 aa6.58□□□□□ -1.36
HMGCS1-205ENST00000508319 ORMDL1Q9P0S3 153 aa6.58□□□□□ -1.36
HMGCS1-205ENST00000508319 K7ERJ3 54 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 464.9 ms