RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 DEFB131BA0A096LNP1 70 aa0.36□□□□□ -2.35
DHFR-204ENST00000508282 EFCAB5A4FU69 1503 aa0.36□□□□□ -2.35
DHFR-204ENST00000508282 KMT2DO14686 5537 aa0.36□□□□□ -2.35
DHFR-204ENST00000508282 PDE4DIPQ5VU43 2346 aa0.36□□□□□ -2.35
DHFR-204ENST00000508282 WNK1Q9H4A3 2382 aa0.35□□□□□ -2.35
DHFR-204ENST00000508282 RNF17Q9BXT8 1623 aaKnown RBP0.35□□□□□ -2.35
DHFR-204ENST00000508282 KCNQ1DNQ9H478 68 aa0.35□□□□□ -2.35
DHFR-204ENST00000508282 MDN1Q9NU22 5596 aa0.35□□□□□ -2.35
DHFR-204ENST00000508282 DMBT1Q9UGM3 2413 aaPredicted RBP0.35□□□□□ -2.35
DHFR-204ENST00000508282 MADDQ8WXG6 1647 aa0.35□□□□□ -2.35
DHFR-204ENST00000508282 MAP1BP46821 2468 aaKnown RBP0.35□□□□□ -2.35
DHFR-204ENST00000508282 DEFB135Q30KP9 77 aa0.34□□□□□ -2.36
DHFR-204ENST00000508282 MYCBP2O75592 4640 aa0.34□□□□□ -2.36
DHFR-204ENST00000508282 KMT2CQ8NEZ4 4911 aaKnown RBP0.32□□□□□ -2.36
DHFR-204ENST00000508282 APC2O95996 2303 aa0.32□□□□□ -2.36
DHFR-204ENST00000508282 INO80Q9ULG1 1556 aaPredicted RBP0.32□□□□□ -2.36
DHFR-204ENST00000508282 CCDC180Q9P1Z9 1646 aa0.31□□□□□ -2.36
DHFR-204ENST00000508282 COL6A5A8TX70 2615 aa0.31□□□□□ -2.36
DHFR-204ENST00000508282 H0YAA0 97 aa0.31□□□□□ -2.36
DHFR-204ENST00000508282 SPRR2DP22532 72 aa0.31□□□□□ -2.36
DHFR-204ENST00000508282 LPAP08519 4548 aa0.31□□□□□ -2.36
DHFR-204ENST00000508282 SSPOA2VEC9 5147 aa0.3□□□□□ -2.36
DHFR-204ENST00000508282 TRANK1O15050 2925 aa0.3□□□□□ -2.36
DHFR-204ENST00000508282 RYR2Q92736 4967 aa0.29□□□□□ -2.36
DHFR-204ENST00000508282 ETDCA0A1B0GVM5 59 aa0.29□□□□□ -2.36
DHFR-204ENST00000508282 SMIM31A0A1B0GVY4 71 aa0.29□□□□□ -2.36
DHFR-204ENST00000508282 KRTAP20-1Q3LI63 56 aa0.29□□□□□ -2.36
DHFR-204ENST00000508282 C3P01024 1663 aa0.29□□□□□ -2.36
DHFR-204ENST00000508282 ALMS1Q8TCU4 4167 aa0.28□□□□□ -2.36
DHFR-204ENST00000508282 SETXQ7Z333 2677 aaKnown RBP0.28□□□□□ -2.36
DHFR-204ENST00000508282 LYNX1G3V0Z9 82 aa0.28□□□□□ -2.36
DHFR-204ENST00000508282 A0A087WWC5 75 aa0.27□□□□□ -2.37
DHFR-204ENST00000508282 H0YGG7 62 aa0.27□□□□□ -2.37
DHFR-204ENST00000508282 DEFB114Q30KQ6 69 aa0.27□□□□□ -2.37
DHFR-204ENST00000508282 CELSR3Q9NYQ7 3312 aa0.27□□□□□ -2.37
DHFR-204ENST00000508282 KIAA0586Q9BVV6 1533 aa0.27□□□□□ -2.37
DHFR-204ENST00000508282 SPTBN4Q9H254 2564 aa0.27□□□□□ -2.37
DHFR-204ENST00000508282 TEP1Q99973 2627 aaKnown RBP0.26□□□□□ -2.37
DHFR-204ENST00000508282 ERICH3Q5RHP9 1530 aa0.26□□□□□ -2.37
DHFR-204ENST00000508282 FLNCQ14315 2725 aa0.26□□□□□ -2.37
DHFR-204ENST00000508282 ACANP16112 2415 aa0.25□□□□□ -2.37
DHFR-204ENST00000508282 IAPPP10997 89 aa0.25□□□□□ -2.37
DHFR-204ENST00000508282 CRIP1P50238 77 aa0.25□□□□□ -2.37
DHFR-204ENST00000508282 COL7A1Q02388 2944 aa0.25□□□□□ -2.37
DHFR-204ENST00000508282 DCHS2Q6V1P9 2916 aa0.24□□□□□ -2.37
DHFR-204ENST00000508282 EPPK1P58107 5090 aaKnown RBP0.24□□□□□ -2.37
DHFR-204ENST00000508282 HERC1Q15751 4861 aa0.24□□□□□ -2.37
DHFR-204ENST00000508282 LINC01549A6NIU2 74 aa0.24□□□□□ -2.37
DHFR-204ENST00000508282 RYR1P21817 5038 aa0.24□□□□□ -2.37
DHFR-204ENST00000508282 RNF213Q63HN8 5207 aa0.23□□□□□ -2.37
DHFR-204ENST00000508282 HYDINQ4G0P3 5121 aa0.23□□□□□ -2.37
DHFR-204ENST00000508282 ABCA13Q86UQ4 5058 aa0.23□□□□□ -2.37
DHFR-204ENST00000508282 FLNBO75369 2602 aaKnown RBP0.23□□□□□ -2.37
DHFR-204ENST00000508282 ABCA6Q8N139 1617 aa0.23□□□□□ -2.37
DHFR-204ENST00000508282 ANKHD1Q8IWZ3 2542 aaKnown RBP0.23□□□□□ -2.37
DHFR-204ENST00000508282 PCNX1Q96RV3 2341 aa0.22□□□□□ -2.37
DHFR-204ENST00000508282 HECTD4Q9Y4D8 3996 aa0.22□□□□□ -2.37
DHFR-204ENST00000508282 HMCN2Q8NDA2 5059 aa0.22□□□□□ -2.37
DHFR-204ENST00000508282 NBASA2RRP1 2371 aa0.22□□□□□ -2.37
DHFR-204ENST00000508282 DEFB130BP0DP73 79 aa0.22□□□□□ -2.37
DHFR-204ENST00000508282 DEFB130AP0DP74 79 aa0.22□□□□□ -2.37
DHFR-204ENST00000508282 ABCC6O95255 1503 aa0.22□□□□□ -2.37
DHFR-204ENST00000508282 ZANQ9Y493 2812 aa0.22□□□□□ -2.37
DHFR-204ENST00000508282 FLNAP21333 2647 aaKnown RBP0.21□□□□□ -2.38
DHFR-204ENST00000508282 COL12A1Q99715 3063 aa0.21□□□□□ -2.38
DHFR-204ENST00000508282 SPRR2BP35325 72 aa0.21□□□□□ -2.38
DHFR-204ENST00000508282 HSPG2P98160 4391 aa0.21□□□□□ -2.38
DHFR-204ENST00000508282 AKAP13Q12802 2813 aa0.2□□□□□ -2.38
DHFR-204ENST00000508282 NBEAL2Q6ZNJ1 2754 aa0.2□□□□□ -2.38
DHFR-204ENST00000508282 S100ZQ8WXG8 99 aa0.2□□□□□ -2.38
DHFR-204ENST00000508282 PDZD2O15018 2839 aa0.2□□□□□ -2.38
DHFR-204ENST00000508282 TIAM1Q13009 1591 aa0.19□□□□□ -2.38
DHFR-204ENST00000508282 HECTD1Q9ULT8 2610 aa0.19□□□□□ -2.38
DHFR-204ENST00000508282 DSPP15924 2871 aaKnown RBP0.19□□□□□ -2.38
DHFR-204ENST00000508282 NSD1Q96L73 2696 aaPredicted RBP0.19□□□□□ -2.38
DHFR-204ENST00000508282 CREBBPQ92793 2442 aa0.19□□□□□ -2.38
DHFR-204ENST00000508282 SETD2Q9BYW2 2564 aaPredicted RBP0.19□□□□□ -2.38
DHFR-204ENST00000508282 TNRC18O15417 2968 aaPredicted RBP0.18□□□□□ -2.38
DHFR-204ENST00000508282 RYR3Q15413 4870 aa0.18□□□□□ -2.38
DHFR-204ENST00000508282 WDFY4Q6ZS81 3184 aa0.17□□□□□ -2.38
DHFR-204ENST00000508282 LY75O60449 1722 aa0.17□□□□□ -2.38
DHFR-204ENST00000508282 MINOS1Q5TGZ0 78 aa0.17□□□□□ -2.38
DHFR-204ENST00000508282 ITSN2Q9NZM3 1697 aa0.17□□□□□ -2.38
DHFR-204ENST00000508282 BOD1L1Q8NFC6 3051 aa0.16□□□□□ -2.38
DHFR-204ENST00000508282 NCBP2-AS2Q69YL0 99 aa0.16□□□□□ -2.38
DHFR-204ENST00000508282 LYSTQ99698 3801 aa0.16□□□□□ -2.38
DHFR-204ENST00000508282 SPRR2GQ9BYE4 73 aa0.16□□□□□ -2.38
DHFR-204ENST00000508282 STAB2Q8WWQ8 2551 aa0.16□□□□□ -2.38
DHFR-204ENST00000508282 USP9XQ93008 2570 aaPredicted RBP0.16□□□□□ -2.38
DHFR-204ENST00000508282 ANKRD36CQ5JPF3 1778 aa0.16□□□□□ -2.38
DHFR-204ENST00000508282 KIF1AQ12756 1690 aa0.15□□□□□ -2.39
DHFR-204ENST00000508282 ABCA10Q8WWZ4 1543 aa0.15□□□□□ -2.39
DHFR-204ENST00000508282 K7EMI3 77 aa0.15□□□□□ -2.39
DHFR-204ENST00000508282 SFTA3P0C7M3 94 aa0.15□□□□□ -2.39
DHFR-204ENST00000508282 SMIM5Q71RC9 77 aa0.15□□□□□ -2.39
DHFR-204ENST00000508282 BIRC6Q9NR09 4857 aa0.15□□□□□ -2.39
DHFR-204ENST00000508282 LAMA3Q16787 3333 aa0.15□□□□□ -2.39
DHFR-204ENST00000508282 MYO18BQ8IUG5 2567 aa0.14□□□□□ -2.39
DHFR-204ENST00000508282 ITPR3Q14573 2671 aa0.14□□□□□ -2.39
DHFR-204ENST00000508282 GLI2P10070 1586 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms