RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-223	ENST00000508249	hADV29S1	A0JD25	119 aa		5.24	□□□□□ -1.57
UBE2D3-223	ENST00000508249	HSD52	Q0P140	79 aa		5.24	□□□□□ -1.57
UBE2D3-223	ENST00000508249	LINC00575	Q6W349	94 aa		5.24	□□□□□ -1.57
UBE2D3-223	ENST00000508249	PPDPFL	Q8WWR9	84 aa		5.24	□□□□□ -1.57
UBE2D3-223	ENST00000508249	CDIP1	Q9H305	208 aa		5.24	□□□□□ -1.57
UBE2D3-223	ENST00000508249	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.23	□□□□□ -1.57
UBE2D3-223	ENST00000508249		H0YGX0	51 aa		5.23	□□□□□ -1.57
UBE2D3-223	ENST00000508249	GHRH	P01286	108 aa		5.23	□□□□□ -1.57
UBE2D3-223	ENST00000508249	CFC1B	P0CG36	223 aa		5.23	□□□□□ -1.57
UBE2D3-223	ENST00000508249	CFC1	P0CG37	223 aa		5.23	□□□□□ -1.57
UBE2D3-223	ENST00000508249	CD164	Q04900	197 aa		5.23	□□□□□ -1.57
UBE2D3-223	ENST00000508249	KRTAP19-2	Q3LHN2	52 aa		5.23	□□□□□ -1.57
UBE2D3-223	ENST00000508249	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	5.23	□□□□□ -1.57
UBE2D3-223	ENST00000508249	C12orf57	Q99622	126 aa		5.23	□□□□□ -1.57
UBE2D3-223	ENST00000508249	LIMD2	Q9BT23	127 aa		5.23	□□□□□ -1.57
UBE2D3-223	ENST00000508249	PRO1933	Q9H354	126 aa		5.23	□□□□□ -1.57
UBE2D3-223	ENST00000508249	UQCR10	Q9UDW1	63 aa		5.23	□□□□□ -1.57
UBE2D3-223	ENST00000508249		F8WEM9	126 aa		5.22	□□□□□ -1.57
UBE2D3-223	ENST00000508249	LINC01547	P58512	204 aa	Predicted RBP	5.22	□□□□□ -1.57
UBE2D3-223	ENST00000508249	OCIAD2	Q56VL3	154 aa		5.22	□□□□□ -1.57
UBE2D3-223	ENST00000508249	DEFB105A	Q8NG35	78 aa		5.22	□□□□□ -1.57
UBE2D3-223	ENST00000508249	IGLV7-46	A0A075B6I9	117 aa		5.21	□□□□□ -1.58
UBE2D3-223	ENST00000508249		A0A1B0GX51	115 aa		5.21	□□□□□ -1.58
UBE2D3-223	ENST00000508249	PRO1854	Q9UHT4	67 aa		5.21	□□□□□ -1.58
UBE2D3-223	ENST00000508249		Q1RN00	199 aa		5.2	□□□□□ -1.58
UBE2D3-223	ENST00000508249		Q6ZQY7	126 aa		5.2	□□□□□ -1.58
UBE2D3-223	ENST00000508249	FXYD2	P54710	66 aa		5.19	□□□□□ -1.58
UBE2D3-223	ENST00000508249	SMIM29	Q86T20	159 aa		5.19	□□□□□ -1.58
UBE2D3-223	ENST00000508249		Q8N377	158 aa		5.19	□□□□□ -1.58
UBE2D3-223	ENST00000508249		H7C2G1	150 aa		5.18	□□□□□ -1.58
UBE2D3-223	ENST00000508249	SMIM6	P0DI80	62 aa		5.18	□□□□□ -1.58
UBE2D3-223	ENST00000508249	LOR	P23490	312 aa	Predicted RBP	5.18	□□□□□ -1.58
UBE2D3-223	ENST00000508249	MT1H	P80294	61 aa		5.18	□□□□□ -1.58
UBE2D3-223	ENST00000508249	ASB16-AS1	Q495Z4	193 aa		5.18	□□□□□ -1.58
UBE2D3-223	ENST00000508249		Q5XG85	94 aa		5.18	□□□□□ -1.58
UBE2D3-223	ENST00000508249		Q6JHZ5	121 aa		5.18	□□□□□ -1.58
UBE2D3-223	ENST00000508249	SSPO	A2VEC9	5147 aa		5.18	□□□□□ -1.58
UBE2D3-223	ENST00000508249	FLG	P20930	4061 aa	Predicted RBP	5.18	□□□□□ -1.58
UBE2D3-223	ENST00000508249	IGLV8-61	A0A075B6I0	122 aa		5.17	□□□□□ -1.58
UBE2D3-223	ENST00000508249		H3BQ85	93 aa		5.17	□□□□□ -1.58
UBE2D3-223	ENST00000508249	COX6C	P09669	75 aa		5.17	□□□□□ -1.58
UBE2D3-223	ENST00000508249	SNHG12	Q9BXW3	62 aa		5.15	□□□□□ -1.59
UBE2D3-223	ENST00000508249	USH2A	O75445	5202 aa		5.14	□□□□□ -1.59
UBE2D3-223	ENST00000508249		M0R143	59 aa		5.14	□□□□□ -1.59
UBE2D3-223	ENST00000508249	TCL1B	O95988	128 aa		5.14	□□□□□ -1.59
UBE2D3-223	ENST00000508249	KRTAP13-3	Q3SY46	172 aa		5.14	□□□□□ -1.59
UBE2D3-223	ENST00000508249	CLEC2B	Q92478	149 aa		5.14	□□□□□ -1.59
UBE2D3-223	ENST00000508249	TRIAP1	O43715	76 aa		5.13	□□□□□ -1.59
UBE2D3-223	ENST00000508249	DNAL4	O96015	105 aa		5.13	□□□□□ -1.59
UBE2D3-223	ENST00000508249	PSMB2	P49721	201 aa		5.12	□□□□□ -1.59
UBE2D3-223	ENST00000508249	KRTAP10-6	P60371	365 aa	Predicted RBP	5.12	□□□□□ -1.59
UBE2D3-223	ENST00000508249	HRCT1	Q6UXD1	115 aa		5.12	□□□□□ -1.59
UBE2D3-223	ENST00000508249	FAM218A	Q96MZ4	157 aa		5.11	□□□□□ -1.59
UBE2D3-223	ENST00000508249	TSTD3	H0UI37	97 aa		5.1	□□□□□ -1.59
UBE2D3-223	ENST00000508249		K7ERJ3	54 aa		5.1	□□□□□ -1.59
UBE2D3-223	ENST00000508249	ORMDL1	Q9P0S3	153 aa		5.1	□□□□□ -1.59
UBE2D3-223	ENST00000508249	TRBV7-7	A0A0K0K1E9	115 aa		5.09	□□□□□ -1.59
UBE2D3-223	ENST00000508249	NDUFV3	P56181	108 aa	Known RBP	5.09	□□□□□ -1.59
UBE2D3-223	ENST00000508249	SEC61B	P60468	96 aa	Known RBP	5.09	□□□□□ -1.59
UBE2D3-223	ENST00000508249		Q6Q795	121 aa		5.09	□□□□□ -1.59
UBE2D3-223	ENST00000508249	IGFL1	Q6UW32	110 aa		5.09	□□□□□ -1.59
UBE2D3-223	ENST00000508249	SS18L2	Q9UHA2	77 aa		5.09	□□□□□ -1.59
UBE2D3-223	ENST00000508249	TMEM256-PLSCR3	K7ERE1	68 aa		5.08	□□□□□ -1.6
UBE2D3-223	ENST00000508249	TRAC	P01848	142 aa		5.08	□□□□□ -1.6
UBE2D3-223	ENST00000508249	SCGB1C2	P0DMR2	95 aa		5.07	□□□□□ -1.6
UBE2D3-223	ENST00000508249	FABP2	P12104	132 aa		5.07	□□□□□ -1.6
UBE2D3-223	ENST00000508249	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	5.07	□□□□□ -1.6
UBE2D3-223	ENST00000508249		H3BMG7	143 aa		5.06	□□□□□ -1.6
UBE2D3-223	ENST00000508249	LST1	O00453	97 aa		5.06	□□□□□ -1.6
UBE2D3-223	ENST00000508249	XP32	Q5T750	250 aa		5.06	□□□□□ -1.6
UBE2D3-223	ENST00000508249	C1orf195	Q5TG92	126 aa		5.06	□□□□□ -1.6
UBE2D3-223	ENST00000508249	LYRM7	Q5U5X0	104 aa		5.06	□□□□□ -1.6
UBE2D3-223	ENST00000508249	TEN1	Q86WV5	123 aa		5.06	□□□□□ -1.6
UBE2D3-223	ENST00000508249		H3BUT2	72 aa		5.05	□□□□□ -1.6
UBE2D3-223	ENST00000508249	UBE2V1	Q13404	147 aa		5.05	□□□□□ -1.6
UBE2D3-223	ENST00000508249		A0A0G2JQZ4	141 aa		5.03	□□□□□ -1.6
UBE2D3-223	ENST00000508249	LOC105371267	A0A1B0GV96	52 aa		5.03	□□□□□ -1.6
UBE2D3-223	ENST00000508249	ATXN8	Q156A1	80 aa		5.02	□□□□□ -1.61
UBE2D3-223	ENST00000508249	C21orf62-AS1	Q17RA5	79 aa		5.02	□□□□□ -1.61
UBE2D3-223	ENST00000508249	ANKRD29	Q8N6D5	301 aa		5.02	□□□□□ -1.61
UBE2D3-223	ENST00000508249	TRBV7-4	A0A0J9YYF1	115 aa		5.01	□□□□□ -1.61
UBE2D3-223	ENST00000508249	TRBV20-1	A0A075B6N2	111 aa		5	□□□□□ -1.61
UBE2D3-223	ENST00000508249		A0A087WSZ3	146 aa		4.99	□□□□□ -1.61
UBE2D3-223	ENST00000508249	RBM3	P98179	157 aa	Known RBP	4.99	□□□□□ -1.61
UBE2D3-223	ENST00000508249	JMJD7-PLA2G4B	H0Y9G9	81 aa		4.98	□□□□□ -1.61
UBE2D3-223	ENST00000508249	DSCR8	Q96T75	97 aa		4.98	□□□□□ -1.61
UBE2D3-223	ENST00000508249		A0A1W2PNM2	257 aa		4.97	□□□□□ -1.61
UBE2D3-223	ENST00000508249	C9orf92	A6NGG3	77 aa		4.97	□□□□□ -1.61
UBE2D3-223	ENST00000508249	BAALC-AS2	P0C853	105 aa		4.97	□□□□□ -1.61
UBE2D3-223	ENST00000508249		A0A1B0GW54	56 aa		4.96	□□□□□ -1.62
UBE2D3-223	ENST00000508249	CCK	P06307	115 aa		4.96	□□□□□ -1.62
UBE2D3-223	ENST00000508249	PDE6G	P18545	87 aa		4.96	□□□□□ -1.62
UBE2D3-223	ENST00000508249	BATF	Q16520	125 aa		4.96	□□□□□ -1.62
UBE2D3-223	ENST00000508249	RPL37	P61927	97 aa	Known RBP	4.95	□□□□□ -1.62
UBE2D3-223	ENST00000508249	C9orf118	A6NHY6	69 aa		4.94	□□□□□ -1.62
UBE2D3-223	ENST00000508249		C9JAW5	83 aa		4.94	□□□□□ -1.62
UBE2D3-223	ENST00000508249	MACF1	Q9UPN3	7388 aa	Known RBP	4.93	□□□□□ -1.62
UBE2D3-223	ENST00000508249		A0A1B0GV72	72 aa		4.92	□□□□□ -1.62
UBE2D3-223	ENST00000508249		Q75L30	129 aa		4.92	□□□□□ -1.62
UBE2D3-223	ENST00000508249		Q96NJ1	140 aa		4.92	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms