RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 SPRR1AP35321 89 aa6.58□□□□□ -1.36
PDLIM5-210ENST00000508216 DNAH10OSP0CZ25 163 aa6.57□□□□□ -1.36
PDLIM5-210ENST00000508216 LCE4AQ5TA78 99 aa6.57□□□□□ -1.36
PDLIM5-210ENST00000508216 FBN3Q75N90 2809 aa6.56□□□□□ -1.36
PDLIM5-210ENST00000508216 IGLV9-49A0A0B4J1Y8 123 aa6.56□□□□□ -1.36
PDLIM5-210ENST00000508216 DEFB105AQ8NG35 78 aa6.56□□□□□ -1.36
PDLIM5-210ENST00000508216 IGLV7-43P04211 117 aa6.55□□□□□ -1.36
PDLIM5-210ENST00000508216 DEFB113Q30KQ7 82 aa6.55□□□□□ -1.36
PDLIM5-210ENST00000508216 Q5W150 140 aa6.55□□□□□ -1.36
PDLIM5-210ENST00000508216 CSNK1G2-AS1Q8NCQ2 148 aa6.55□□□□□ -1.36
PDLIM5-210ENST00000508216 COL6A6A6NMZ7 2263 aa6.55□□□□□ -1.36
PDLIM5-210ENST00000508216 CREBBPQ92793 2442 aa6.54□□□□□ -1.36
PDLIM5-210ENST00000508216 K7ERS5 55 aa6.54□□□□□ -1.36
PDLIM5-210ENST00000508216 NBPF19A0A087WUL8 3843 aa6.54□□□□□ -1.36
PDLIM5-210ENST00000508216 PCNX1Q96RV3 2341 aa6.54□□□□□ -1.36
PDLIM5-210ENST00000508216 KRTAP21-3Q3LHN1 58 aa6.54□□□□□ -1.36
PDLIM5-210ENST00000508216 IGFL1Q6UW32 110 aa6.54□□□□□ -1.36
PDLIM5-210ENST00000508216 FAM168BA1KXE4 195 aa6.53□□□□□ -1.36
PDLIM5-210ENST00000508216 KRTAP9-7A8MTY7 169 aa6.53□□□□□ -1.36
PDLIM5-210ENST00000508216 CAMK2N2Q96S95 79 aa6.53□□□□□ -1.36
PDLIM5-210ENST00000508216 C8orf17Q9NRJ1 99 aa6.53□□□□□ -1.36
PDLIM5-210ENST00000508216 NOTCH2Q04721 2471 aa6.53□□□□□ -1.36
PDLIM5-210ENST00000508216 LUZP6Q538Z0 58 aa6.52□□□□□ -1.37
PDLIM5-210ENST00000508216 WWC2-AS2Q96NR7 200 aa6.52□□□□□ -1.37
PDLIM5-210ENST00000508216 ATMQ13315 3056 aa6.52□□□□□ -1.37
PDLIM5-210ENST00000508216 NOP10Q9NPE3 64 aaKnown RBP6.52□□□□□ -1.37
PDLIM5-210ENST00000508216 NDUFAF8A1L188 74 aa6.5□□□□□ -1.37
PDLIM5-210ENST00000508216 RPL37AP61513 92 aaKnown RBP6.49□□□□□ -1.37
PDLIM5-210ENST00000508216 KRTAP15-1Q3LI76 137 aa6.49□□□□□ -1.37
PDLIM5-210ENST00000508216 KRTAP3-1Q9BYR8 98 aa6.49□□□□□ -1.37
PDLIM5-210ENST00000508216 LINC00304Q8N9R0 145 aa6.48□□□□□ -1.37
PDLIM5-210ENST00000508216 KRTAP4-8A0A0G2JLE6 195 aa6.47□□□□□ -1.37
PDLIM5-210ENST00000508216 A0A087WTM6 91 aa6.46□□□□□ -1.37
PDLIM5-210ENST00000508216 A0A1W2PNU3 283 aaPredicted RBP6.46□□□□□ -1.38
PDLIM5-210ENST00000508216 H3BUX3 64 aa6.46□□□□□ -1.38
PDLIM5-210ENST00000508216 ROS1P08922 2347 aa6.45□□□□□ -1.38
PDLIM5-210ENST00000508216 RP1L1Q8IWN7 2480 aaPredicted RBP6.45□□□□□ -1.38
PDLIM5-210ENST00000508216 CCL19Q99731 98 aa6.44□□□□□ -1.38
PDLIM5-210ENST00000508216 TLX1NBP0CAT3 122 aa6.44□□□□□ -1.38
PDLIM5-210ENST00000508216 BRD3OSQ6XYD6 125 aa6.44□□□□□ -1.38
PDLIM5-210ENST00000508216 FLNCQ14315 2725 aa6.43□□□□□ -1.38
PDLIM5-210ENST00000508216 POLQO75417 2590 aa6.43□□□□□ -1.38
PDLIM5-210ENST00000508216 DNHD1Q96M86 4753 aa6.43□□□□□ -1.38
PDLIM5-210ENST00000508216 UTP20O75691 2785 aaKnown RBP6.43□□□□□ -1.38
PDLIM5-210ENST00000508216 LRRK2Q5S007 2527 aa6.41□□□□□ -1.38
PDLIM5-210ENST00000508216 USP9YO00507 2555 aaPredicted RBP6.41□□□□□ -1.38
PDLIM5-210ENST00000508216 KRTAP23-1A1A580 65 aa6.41□□□□□ -1.38
PDLIM5-210ENST00000508216 KRTAP13-3Q3SY46 172 aa6.41□□□□□ -1.38
PDLIM5-210ENST00000508216 LCE1DQ5T752 114 aa6.41□□□□□ -1.38
PDLIM5-210ENST00000508216 ANAPC11Q9NYG5 84 aa6.41□□□□□ -1.38
PDLIM5-210ENST00000508216 PRO0255Q9UI72 69 aa6.41□□□□□ -1.38
PDLIM5-210ENST00000508216 NF1P21359 2839 aa6.39□□□□□ -1.39
PDLIM5-210ENST00000508216 ITPR2Q14571 2701 aa6.39□□□□□ -1.39
PDLIM5-210ENST00000508216 SETD2Q9BYW2 2564 aaPredicted RBP6.39□□□□□ -1.39
PDLIM5-210ENST00000508216 AKAP6Q13023 2319 aa6.39□□□□□ -1.39
PDLIM5-210ENST00000508216 KRTAP10-2P60368 255 aa6.39□□□□□ -1.39
PDLIM5-210ENST00000508216 LRBAP50851 2863 aa6.38□□□□□ -1.39
PDLIM5-210ENST00000508216 LY6G6CO95867 125 aa6.38□□□□□ -1.39
PDLIM5-210ENST00000508216 KRTAP11-1Q8IUC1 163 aa6.38□□□□□ -1.39
PDLIM5-210ENST00000508216 GIG44P09565 113 aaPredicted RBP6.37□□□□□ -1.39
PDLIM5-210ENST00000508216 SPRR1BP22528 89 aa6.37□□□□□ -1.39
PDLIM5-210ENST00000508216 MRPL34Q9BQ48 92 aaKnown RBP6.36□□□□□ -1.39
PDLIM5-210ENST00000508216 SPINT4Q6UDR6 99 aa6.35□□□□□ -1.39
PDLIM5-210ENST00000508216 OTOGQ6ZRI0 2925 aa6.34□□□□□ -1.39
PDLIM5-210ENST00000508216 SPENQ96T58 3664 aaKnown RBP6.34□□□□□ -1.39
PDLIM5-210ENST00000508216 LY6EQ16553 131 aa6.34□□□□□ -1.4
PDLIM5-210ENST00000508216 BOD1L1Q8NFC6 3051 aa6.33□□□□□ -1.4
PDLIM5-210ENST00000508216 F8P00451 2351 aa6.33□□□□□ -1.4
PDLIM5-210ENST00000508216 CSMD1Q96PZ7 3565 aa6.33□□□□□ -1.4
PDLIM5-210ENST00000508216 LELP1Q5T871 98 aa6.33□□□□□ -1.4
PDLIM5-210ENST00000508216 C15orf56Q8N910 161 aa6.32□□□□□ -1.4
PDLIM5-210ENST00000508216 BSNQ9UPA5 3926 aa6.31□□□□□ -1.4
PDLIM5-210ENST00000508216 Q96NJ1 140 aa6.31□□□□□ -1.4
PDLIM5-210ENST00000508216 A0A1B0GVX0 72 aa6.29□□□□□ -1.4
PDLIM5-210ENST00000508216 DEFB136Q30KP8 78 aa6.29□□□□□ -1.4
PDLIM5-210ENST00000508216 ABCA2Q9BZC7 2435 aa6.29□□□□□ -1.4
PDLIM5-210ENST00000508216 ADGRG4Q8IZF6 3080 aa6.29□□□□□ -1.4
PDLIM5-210ENST00000508216 CELSR2Q9HCU4 2923 aa6.28□□□□□ -1.4
PDLIM5-210ENST00000508216 PANO1I0J062 215 aa6.28□□□□□ -1.4
PDLIM5-210ENST00000508216 KRTAP9-3Q9BYQ3 159 aa6.28□□□□□ -1.4
PDLIM5-210ENST00000508216 CELSR1Q9NYQ6 3014 aa6.28□□□□□ -1.4
PDLIM5-210ENST00000508216 TLN1Q9Y490 2541 aaKnown RBP6.27□□□□□ -1.41
PDLIM5-210ENST00000508216 H0YAA0 97 aa6.27□□□□□ -1.41
PDLIM5-210ENST00000508216 PDZD2O15018 2839 aa6.27□□□□□ -1.41
PDLIM5-210ENST00000508216 CENPEQ02224 2701 aa6.26□□□□□ -1.41
PDLIM5-210ENST00000508216 C10orf99Q6UWK7 81 aa6.26□□□□□ -1.41
PDLIM5-210ENST00000508216 C4orf3Q8WVX3 66 aa6.26□□□□□ -1.41
PDLIM5-210ENST00000508216 CRYBG3Q68DQ2 2970 aa6.26□□□□□ -1.41
PDLIM5-210ENST00000508216 SPG11Q96JI7 2443 aa6.24□□□□□ -1.41
PDLIM5-210ENST00000508216 A0A0G2JQZ4 141 aa6.24□□□□□ -1.41
PDLIM5-210ENST00000508216 A0A1W2PNN7 141 aa6.24□□□□□ -1.41
PDLIM5-210ENST00000508216 HIVEP1P15822 2718 aa6.24□□□□□ -1.41
PDLIM5-210ENST00000508216 NBDYA0A0U1RRE5 68 aa6.23□□□□□ -1.41
PDLIM5-210ENST00000508216 TACC2O95359 2948 aa6.23□□□□□ -1.41
PDLIM5-210ENST00000508216 KRTAP4-7Q9BYR0 210 aa6.23□□□□□ -1.41
PDLIM5-210ENST00000508216 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.22□□□□□ -1.414e-6■□□□□ 9.7
PDLIM5-210ENST00000508216 PSORS1C2Q9UIG4 136 aa6.22□□□□□ -1.41
PDLIM5-210ENST00000508216 SSBP3-AS1Q7Z2R9 100 aa6.21□□□□□ -1.41
PDLIM5-210ENST00000508216 CIRBP-AS1Q8TBR5 109 aa6.21□□□□□ -1.41
PDLIM5-210ENST00000508216 NBASA2RRP1 2371 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms