RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 A6NDN8 102 aa6.21□□□□□ -1.42
HMGCS1-204ENST00000507293 C1orf195Q5TG92 126 aa6.21□□□□□ -1.42
HMGCS1-204ENST00000507293 HIST1H4GQ99525 98 aa6.21□□□□□ -1.42
HMGCS1-204ENST00000507293 FSIP2Q5CZC0 6907 aa6.2□□□□□ -1.42
HMGCS1-204ENST00000507293 TRAV13-2A0A0B4J235 113 aa6.2□□□□□ -1.42
HMGCS1-204ENST00000507293 HIGD1BQ9P298 99 aa6.2□□□□□ -1.42
HMGCS1-204ENST00000507293 CRCT1Q9UGL9 99 aa6.2□□□□□ -1.42
HMGCS1-204ENST00000507293 CFC1BP0CG36 223 aa6.18□□□□□ -1.42
HMGCS1-204ENST00000507293 A4D1N5 150 aa6.17□□□□□ -1.42
HMGCS1-204ENST00000507293 RPL37P61927 97 aaKnown RBP6.17□□□□□ -1.42
HMGCS1-204ENST00000507293 SMIM11BQ8TCY0 68 aa6.17□□□□□ -1.42
HMGCS1-204ENST00000507293 NHP2Q9NX24 153 aaKnown RBP6.16□□□□□ -1.42
HMGCS1-204ENST00000507293 TCL1BO95988 128 aa6.14□□□□□ -1.43
HMGCS1-204ENST00000507293 LORP23490 312 aaPredicted RBP6.14□□□□□ -1.43
HMGCS1-204ENST00000507293 KRTAP10-6P60371 365 aaPredicted RBP6.14□□□□□ -1.43
HMGCS1-204ENST00000507293 C2orf91Q6ZV80 131 aa6.14□□□□□ -1.43
HMGCS1-204ENST00000507293 F8WEM9 126 aa6.13□□□□□ -1.43
HMGCS1-204ENST00000507293 VAMP3Q15836 100 aa6.13□□□□□ -1.43
HMGCS1-204ENST00000507293 UQCR10Q9UDW1 63 aa6.13□□□□□ -1.43
HMGCS1-204ENST00000507293 TMEM238LA0A1B0GVL6 79 aa6.12□□□□□ -1.43
HMGCS1-204ENST00000507293 A6NJY4 79 aa6.12□□□□□ -1.43
HMGCS1-204ENST00000507293 COX6B2Q6YFQ2 88 aa6.12□□□□□ -1.43
HMGCS1-204ENST00000507293 CEND1Q8N111 149 aa6.12□□□□□ -1.43
HMGCS1-204ENST00000507293 RAB37Q96AX2 223 aa6.12□□□□□ -1.43
HMGCS1-204ENST00000507293 M0R2T5 61 aa6.11□□□□□ -1.43
HMGCS1-204ENST00000507293 C12orf57Q99622 126 aa6.11□□□□□ -1.43
HMGCS1-204ENST00000507293 KRTAP3-3Q9BYR6 98 aa6.11□□□□□ -1.43
HMGCS1-204ENST00000507293 KRTAP3-2Q9BYR7 98 aa6.11□□□□□ -1.43
HMGCS1-204ENST00000507293 SMIM6P0DI80 62 aa6.1□□□□□ -1.43
HMGCS1-204ENST00000507293 HSD52Q0P140 79 aa6.1□□□□□ -1.43
HMGCS1-204ENST00000507293 LINC00575Q6W349 94 aa6.1□□□□□ -1.43
HMGCS1-204ENST00000507293 Q6ZQY7 126 aa6.1□□□□□ -1.43
HMGCS1-204ENST00000507293 A0A0B4J2C4 111 aa6.09□□□□□ -1.43
HMGCS1-204ENST00000507293 CFC1P0CG37 223 aa6.09□□□□□ -1.43
HMGCS1-204ENST00000507293 TRBV7-7A0A0K0K1E9 115 aa6.08□□□□□ -1.44
HMGCS1-204ENST00000507293 hADV29S1A0JD25 119 aa6.08□□□□□ -1.44
HMGCS1-204ENST00000507293 BVES-AS1Q5T3Y7 98 aa6.08□□□□□ -1.44
HMGCS1-204ENST00000507293 Q6JHZ5 121 aa6.08□□□□□ -1.44
HMGCS1-204ENST00000507293 IGFL1Q6UW32 110 aa6.08□□□□□ -1.44
HMGCS1-204ENST00000507293 CLEC2BQ92478 149 aa6.08□□□□□ -1.44
HMGCS1-204ENST00000507293 FXYD2P54710 66 aa6.06□□□□□ -1.44
HMGCS1-204ENST00000507293 PRO1854Q9UHT4 67 aa6.06□□□□□ -1.44
HMGCS1-204ENST00000507293 LOC105371267A0A1B0GV96 52 aa6.05□□□□□ -1.44
HMGCS1-204ENST00000507293 SNCGO76070 127 aa6.05□□□□□ -1.44
HMGCS1-204ENST00000507293 OCIAD2Q56VL3 154 aa6.05□□□□□ -1.44
HMGCS1-204ENST00000507293 OBSCN-AS1Q96MR7 158 aa6.04□□□□□ -1.44
HMGCS1-204ENST00000507293 H0YGX0 51 aa6.03□□□□□ -1.44
HMGCS1-204ENST00000507293 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.03□□□□□ -1.44
HMGCS1-204ENST00000507293 ATP11AUNQ6ZP68 121 aa6.02□□□□□ -1.45
HMGCS1-204ENST00000507293 Q75L30 129 aa6.02□□□□□ -1.45
HMGCS1-204ENST00000507293 TSTD3H0UI37 97 aa6.01□□□□□ -1.45
HMGCS1-204ENST00000507293 H3BUT2 72 aa6.01□□□□□ -1.45
HMGCS1-204ENST00000507293 Q6Q795 121 aa6.01□□□□□ -1.45
HMGCS1-204ENST00000507293 PPDPFLQ8WWR9 84 aa6.01□□□□□ -1.45
HMGCS1-204ENST00000507293 FLGP20930 4061 aaPredicted RBP6□□□□□ -1.45
HMGCS1-204ENST00000507293 SNHG12Q9BXW3 62 aa6□□□□□ -1.45
HMGCS1-204ENST00000507293 M0R143 59 aa5.99□□□□□ -1.45
HMGCS1-204ENST00000507293 LST1O00453 97 aa5.99□□□□□ -1.45
HMGCS1-204ENST00000507293 COX6CP09669 75 aa5.99□□□□□ -1.45
HMGCS1-204ENST00000507293 PSMB2P49721 201 aa5.99□□□□□ -1.45
HMGCS1-204ENST00000507293 A0A1B0GX51 115 aa5.98□□□□□ -1.45
HMGCS1-204ENST00000507293 GHRHP01286 108 aa5.98□□□□□ -1.45
HMGCS1-204ENST00000507293 Q96NJ1 140 aa5.98□□□□□ -1.45
HMGCS1-204ENST00000507293 K7ERJ3 54 aa5.97□□□□□ -1.45
HMGCS1-204ENST00000507293 TRIAP1O43715 76 aa5.96□□□□□ -1.46
HMGCS1-204ENST00000507293 SS18L2Q9UHA2 77 aa5.95□□□□□ -1.46
HMGCS1-204ENST00000507293 FAM218AQ96MZ4 157 aa5.94□□□□□ -1.46
HMGCS1-204ENST00000507293 DNAL4O96015 105 aa5.93□□□□□ -1.46
HMGCS1-204ENST00000507293 SCGB1C2P0DMR2 95 aa5.93□□□□□ -1.46
HMGCS1-204ENST00000507293 C20orf166-AS1Q96NR2 134 aa5.93□□□□□ -1.46
HMGCS1-204ENST00000507293 H3BQ85 93 aa5.92□□□□□ -1.46
HMGCS1-204ENST00000507293 NDUFV3P56181 108 aaKnown RBP5.92□□□□□ -1.46
HMGCS1-204ENST00000507293 TEN1Q86WV5 123 aa5.92□□□□□ -1.46
HMGCS1-204ENST00000507293 A0A087WSZ3 146 aa5.91□□□□□ -1.46
HMGCS1-204ENST00000507293 A8MUU9 505 aa5.91□□□□□ -1.46
HMGCS1-204ENST00000507293 FABP2P12104 132 aa5.89□□□□□ -1.47
HMGCS1-204ENST00000507293 DSCR10P59022 87 aa5.89□□□□□ -1.47
HMGCS1-204ENST00000507293 BATFQ16520 125 aa5.89□□□□□ -1.47
HMGCS1-204ENST00000507293 ORMDL1Q9P0S3 153 aa5.89□□□□□ -1.47
HMGCS1-204ENST00000507293 TRBV20-1A0A075B6N2 111 aa5.88□□□□□ -1.47
HMGCS1-204ENST00000507293 TRACP01848 142 aa5.88□□□□□ -1.47
HMGCS1-204ENST00000507293 H3BMG7 143 aa5.87□□□□□ -1.47
HMGCS1-204ENST00000507293 TMEM256-PLSCR3K7ERE1 68 aa5.87□□□□□ -1.47
HMGCS1-204ENST00000507293 LYRM7Q5U5X0 104 aa5.87□□□□□ -1.47
HMGCS1-204ENST00000507293 SIGMAR1Q99720 223 aa5.87□□□□□ -1.47
HMGCS1-204ENST00000507293 KRTAP9-8Q9BYQ0 159 aa5.87□□□□□ -1.47
HMGCS1-204ENST00000507293 A0A1W2PNM2 257 aa5.85□□□□□ -1.47
HMGCS1-204ENST00000507293 ATXN8Q156A1 80 aa5.84□□□□□ -1.47
HMGCS1-204ENST00000507293 UBE2V1Q13404 147 aa5.83□□□□□ -1.48
HMGCS1-204ENST00000507293 NAA38Q9BRA0 125 aaKnown RBP5.83□□□□□ -1.48
HMGCS1-204ENST00000507293 FAM236DA0A1B0GTK5 79 aa5.81□□□□□ -1.48
HMGCS1-204ENST00000507293 A0A1B0GV72 72 aa5.81□□□□□ -1.48
HMGCS1-204ENST00000507293 C9orf118A6NHY6 69 aa5.81□□□□□ -1.48
HMGCS1-204ENST00000507293 KRTAP16-1A8MUX0 517 aa5.81□□□□□ -1.48
HMGCS1-204ENST00000507293 IGKV4-1P06312 121 aa5.81□□□□□ -1.48
HMGCS1-204ENST00000507293 FAM236CP0DP71 79 aa5.81□□□□□ -1.48
HMGCS1-204ENST00000507293 LINC00313P59037 77 aa5.81□□□□□ -1.48
HMGCS1-204ENST00000507293 BAALC-AS2P0C853 105 aa5.8□□□□□ -1.48
HMGCS1-204ENST00000507293 ANKRD29Q8N6D5 301 aa5.8□□□□□ -1.48
HMGCS1-204ENST00000507293 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms