RNA–Protein interactions for RNA: ENST00000506747.5

CLOCK-205, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 1,337 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-205ENST00000506747 USP34Q70CQ2 3546 aa1.31□□□□□ -2.2
CLOCK-205ENST00000506747 MMP24-AS1A0A0U1RRL7 71 aa1.31□□□□□ -2.2
CLOCK-205ENST00000506747 SPINK13Q1W4C9 94 aa1.31□□□□□ -2.2
CLOCK-205ENST00000506747 DEFB133Q30KQ1 61 aa1.31□□□□□ -2.2
CLOCK-205ENST00000506747 NBEAQ8NFP9 2946 aa1.3□□□□□ -2.2
CLOCK-205ENST00000506747 TPRP12270 2363 aaKnown RBP1.3□□□□□ -2.2
CLOCK-205ENST00000506747 DNAH12Q6ZR08 3092 aa1.3□□□□□ -2.2
CLOCK-205ENST00000506747 LY6G6CO95867 125 aa1.3□□□□□ -2.2
CLOCK-205ENST00000506747 SPRR1AP35321 89 aa1.3□□□□□ -2.2
CLOCK-205ENST00000506747 CLPSL2Q6UWE3 100 aa1.3□□□□□ -2.2
CLOCK-205ENST00000506747 WFDC10BQ8IUB3 73 aa1.3□□□□□ -2.2
CLOCK-205ENST00000506747 CCL19Q99731 98 aa1.3□□□□□ -2.2
CLOCK-205ENST00000506747 C6orf48Q9UBA6 75 aa1.3□□□□□ -2.2
CLOCK-205ENST00000506747 TNRC18O15417 2968 aaPredicted RBP1.29□□□□□ -2.2
CLOCK-205ENST00000506747 PKDREJQ9NTG1 2253 aa1.29□□□□□ -2.2
CLOCK-205ENST00000506747 MKI67P46013 3256 aaKnown RBP1.29□□□□□ -2.2
CLOCK-205ENST00000506747 DNAH14Q0VDD8 3507 aa1.29□□□□□ -2.2
CLOCK-205ENST00000506747 ZZEF1O43149 2961 aa1.29□□□□□ -2.2
CLOCK-205ENST00000506747 NBDYA0A0U1RRE5 68 aa1.29□□□□□ -2.2
CLOCK-205ENST00000506747 G3V318 75 aa1.29□□□□□ -2.2
CLOCK-205ENST00000506747 DEFB109BQ30KR1 87 aa1.29□□□□□ -2.2
CLOCK-205ENST00000506747 Q6ZRX8 168 aa1.29□□□□□ -2.2
CLOCK-205ENST00000506747 C5orf56Q8N8D9 126 aa1.29□□□□□ -2.2
CLOCK-205ENST00000506747 Q96NJ1 140 aa1.29□□□□□ -2.2
CLOCK-205ENST00000506747 COL6A6A6NMZ7 2263 aa1.29□□□□□ -2.2
CLOCK-205ENST00000506747 CACNA1EQ15878 2313 aa1.29□□□□□ -2.2
CLOCK-205ENST00000506747 CEP250Q9BV73 2442 aa1.29□□□□□ -2.2
CLOCK-205ENST00000506747 CUL9Q8IWT3 2517 aa1.28□□□□□ -2.2
CLOCK-205ENST00000506747 U3KQA8 63 aa1.28□□□□□ -2.2
CLOCK-205ENST00000506747 IGF2RP11717 2491 aa1.28□□□□□ -2.2
CLOCK-205ENST00000506747 CHD7Q9P2D1 2997 aa1.28□□□□□ -2.2
CLOCK-205ENST00000506747 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.28□□□□□ -2.211e-9■■■■■ 46.8
CLOCK-205ENST00000506747 CFAP47Q6ZTR5 3102 aa1.28□□□□□ -2.21
CLOCK-205ENST00000506747 ACACAQ13085 2346 aa1.27□□□□□ -2.21
CLOCK-205ENST00000506747 UNQ6190/PRO20217Q6UXQ8 127 aa1.27□□□□□ -2.21
CLOCK-205ENST00000506747 C4orf3Q8WVX3 66 aa1.27□□□□□ -2.21
CLOCK-205ENST00000506747 MAP1BP46821 2468 aaKnown RBP1.27□□□□□ -2.21
CLOCK-205ENST00000506747 PCNX1Q96RV3 2341 aa1.27□□□□□ -2.21
CLOCK-205ENST00000506747 FBN3Q75N90 2809 aa1.26□□□□□ -2.21
CLOCK-205ENST00000506747 APC2O95996 2303 aa1.26□□□□□ -2.21
CLOCK-205ENST00000506747 AKAP6Q13023 2319 aa1.26□□□□□ -2.21
CLOCK-205ENST00000506747 H0YAA0 97 aa1.26□□□□□ -2.21
CLOCK-205ENST00000506747 H3BUX3 64 aa1.26□□□□□ -2.21
CLOCK-205ENST00000506747 SPRR1BP22528 89 aa1.26□□□□□ -2.21
CLOCK-205ENST00000506747 RP1L1Q8IWN7 2480 aaPredicted RBP1.26□□□□□ -2.21
CLOCK-205ENST00000506747 DMDP11532 3685 aa1.26□□□□□ -2.21
CLOCK-205ENST00000506747 FRYLO94915 3013 aa1.25□□□□□ -2.21
CLOCK-205ENST00000506747 RPL37AP61513 92 aaKnown RBP1.25□□□□□ -2.21
CLOCK-205ENST00000506747 COX6B2Q6YFQ2 88 aa1.25□□□□□ -2.21
CLOCK-205ENST00000506747 DEFB119Q8N690 84 aa1.25□□□□□ -2.21
CLOCK-205ENST00000506747 MRPL34Q9BQ48 92 aaKnown RBP1.25□□□□□ -2.21
CLOCK-205ENST00000506747 NCOR1O75376 2440 aa1.25□□□□□ -2.21
CLOCK-205ENST00000506747 SPTA1P02549 2419 aa1.25□□□□□ -2.21
CLOCK-205ENST00000506747 FRYQ5TBA9 3013 aa1.25□□□□□ -2.21
CLOCK-205ENST00000506747 PRUNE2Q8WUY3 3088 aa1.25□□□□□ -2.21
CLOCK-205ENST00000506747 SPEGQ15772 3267 aa1.25□□□□□ -2.21
CLOCK-205ENST00000506747 PTPRZ1P23471 2315 aaPredicted RBP1.25□□□□□ -2.21
CLOCK-205ENST00000506747 C2CD3Q4AC94 2353 aa1.24□□□□□ -2.21
CLOCK-205ENST00000506747 KALRNO60229 2985 aa1.24□□□□□ -2.21
CLOCK-205ENST00000506747 HTN1P15515 57 aa1.24□□□□□ -2.21
CLOCK-205ENST00000506747 Q6ZSA8 131 aa1.24□□□□□ -2.21
CLOCK-205ENST00000506747 SSBP3-AS1Q7Z2R9 100 aa1.24□□□□□ -2.21
CLOCK-205ENST00000506747 DEFB105AQ8NG35 78 aa1.24□□□□□ -2.21
CLOCK-205ENST00000506747 ZDBF2Q9HCK1 2354 aa1.23□□□□□ -2.21
CLOCK-205ENST00000506747 GVINP1Q7Z2Y8 2422 aa1.23□□□□□ -2.21
CLOCK-205ENST00000506747 CHD6Q8TD26 2715 aa1.23□□□□□ -2.21
CLOCK-205ENST00000506747 WDFY4Q6ZS81 3184 aa1.23□□□□□ -2.21
CLOCK-205ENST00000506747 ROS1P08922 2347 aa1.23□□□□□ -2.21
CLOCK-205ENST00000506747 EP300Q09472 2414 aaPredicted RBP1.23□□□□□ -2.21
CLOCK-205ENST00000506747 OTOGQ6ZRI0 2925 aa1.23□□□□□ -2.21
CLOCK-205ENST00000506747 BRCA2P51587 3418 aa1.23□□□□□ -2.21
CLOCK-205ENST00000506747 AKAP9Q99996 3911 aa1.23□□□□□ -2.21
CLOCK-205ENST00000506747 WDFY3Q8IZQ1 3526 aa1.23□□□□□ -2.21
CLOCK-205ENST00000506747 TENM2Q9NT68 2774 aa1.22□□□□□ -2.21
CLOCK-205ENST00000506747 SPTBN4Q9H254 2564 aa1.22□□□□□ -2.21
CLOCK-205ENST00000506747 NOP10Q9NPE3 64 aaKnown RBP1.22□□□□□ -2.21
CLOCK-205ENST00000506747 PRO0255Q9UI72 69 aa1.22□□□□□ -2.21
CLOCK-205ENST00000506747 SPENQ96T58 3664 aaKnown RBP1.22□□□□□ -2.21
CLOCK-205ENST00000506747 VCANP13611 3396 aa1.22□□□□□ -2.21
CLOCK-205ENST00000506747 LAMA3Q16787 3333 aa1.22□□□□□ -2.21
CLOCK-205ENST00000506747 DCHS1Q96JQ0 3298 aa1.22□□□□□ -2.21
CLOCK-205ENST00000506747 LAMA2P24043 3122 aaKnown RBP1.22□□□□□ -2.21
CLOCK-205ENST00000506747 TRIOO75962 3097 aa1.22□□□□□ -2.21
CLOCK-205ENST00000506747 HELZ2Q9BYK8 2649 aaKnown RBP1.22□□□□□ -2.21
CLOCK-205ENST00000506747 FREM2Q5SZK8 3169 aa1.22□□□□□ -2.21
CLOCK-205ENST00000506747 HTTP42858 3142 aa1.22□□□□□ -2.21
CLOCK-205ENST00000506747 ASH1LQ9NR48 2969 aaKnown RBP1.22□□□□□ -2.21
CLOCK-205ENST00000506747 AKAP13Q12802 2813 aa1.22□□□□□ -2.21
CLOCK-205ENST00000506747 ZFHX4Q86UP3 3567 aa1.21□□□□□ -2.21
CLOCK-205ENST00000506747 LYNX1P0DP58 116 aa1.21□□□□□ -2.22
CLOCK-205ENST00000506747 H1FX-AS1Q4G0G2 97 aa1.21□□□□□ -2.22
CLOCK-205ENST00000506747 LELP1Q5T871 98 aa1.21□□□□□ -2.22
CLOCK-205ENST00000506747 MAP1AP78559 2803 aaPredicted RBP1.21□□□□□ -2.22
CLOCK-205ENST00000506747 PIEZO2Q9H5I5 2752 aa1.21□□□□□ -2.22
CLOCK-205ENST00000506747 CREBBPQ92793 2442 aa1.21□□□□□ -2.22
CLOCK-205ENST00000506747 BOD1L1Q8NFC6 3051 aa1.21□□□□□ -2.22
CLOCK-205ENST00000506747 ITPR1Q14643 2758 aa1.21□□□□□ -2.22
CLOCK-205ENST00000506747 LAMA1P25391 3075 aa1.2□□□□□ -2.22
CLOCK-205ENST00000506747 CACNA1HO95180 2353 aa1.2□□□□□ -2.22
CLOCK-205ENST00000506747 FLG2Q5D862 2391 aaPredicted RBP1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms