RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 PPDPFLQ8WWR9 84 aa3.59□□□□□ -1.83
SCLT1-207ENST00000506233 A8MUN3 132 aa3.59□□□□□ -1.83
SCLT1-207ENST00000506233 A0A096LNI7 61 aa3.59□□□□□ -1.84
SCLT1-207ENST00000506233 TRBV7-4A0A0J9YYF1 115 aa3.59□□□□□ -1.84
SCLT1-207ENST00000506233 CKS1BP61024 79 aa3.59□□□□□ -1.84
SCLT1-207ENST00000506233 KRTAP21-3Q3LHN1 58 aa3.58□□□□□ -1.84
SCLT1-207ENST00000506233 TRAV13-2A0A0B4J235 113 aa3.58□□□□□ -1.84
SCLT1-207ENST00000506233 LINC00158P58513 81 aa3.58□□□□□ -1.84
SCLT1-207ENST00000506233 KRTAP10-4P60372 401 aaPredicted RBP3.58□□□□□ -1.84
SCLT1-207ENST00000506233 TYMSOSQ8TAI1 123 aa3.58□□□□□ -1.84
SCLT1-207ENST00000506233 LINC00846Q9NV44 126 aa3.58□□□□□ -1.84
SCLT1-207ENST00000506233 Q6ZQT0 140 aa3.58□□□□□ -1.84
SCLT1-207ENST00000506233 IGLV5-48A0A075B6I7 105 aa3.57□□□□□ -1.84
SCLT1-207ENST00000506233 TRBV7-7A0A0K0K1E9 115 aa3.57□□□□□ -1.84
SCLT1-207ENST00000506233 C15orf53Q8NAA6 179 aa3.57□□□□□ -1.84
SCLT1-207ENST00000506233 A0A1B0GVX0 72 aa3.57□□□□□ -1.84
SCLT1-207ENST00000506233 LECT2O14960 151 aa3.57□□□□□ -1.84
SCLT1-207ENST00000506233 SCGB1C2P0DMR2 95 aa3.57□□□□□ -1.84
SCLT1-207ENST00000506233 LCE4AQ5TA78 99 aa3.57□□□□□ -1.84
SCLT1-207ENST00000506233 MUC7Q8TAX7 377 aa3.57□□□□□ -1.84
SCLT1-207ENST00000506233 KRTAP9-9Q9BYP9 154 aa3.57□□□□□ -1.84
SCLT1-207ENST00000506233 Q1RN00 199 aa3.56□□□□□ -1.84
SCLT1-207ENST00000506233 BAALC-AS2P0C853 105 aa3.56□□□□□ -1.84
SCLT1-207ENST00000506233 LOC110117498A0A087WWA1 95 aa3.55□□□□□ -1.84
SCLT1-207ENST00000506233 CIRBP-AS1Q8TBR5 109 aa3.55□□□□□ -1.84
SCLT1-207ENST00000506233 ST20-AS1Q8NBB2 130 aa3.55□□□□□ -1.84
SCLT1-207ENST00000506233 KRTAP9-6A0A140TA67 174 aa3.55□□□□□ -1.84
SCLT1-207ENST00000506233 KRTAP9-7A8MTY7 169 aa3.55□□□□□ -1.84
SCLT1-207ENST00000506233 LUZP6Q538Z0 58 aa3.55□□□□□ -1.84
SCLT1-207ENST00000506233 SPACA4Q8TDM5 124 aa3.55□□□□□ -1.84
SCLT1-207ENST00000506233 TRAV23DV6A0A075B6W5 121 aa3.54□□□□□ -1.84
SCLT1-207ENST00000506233 K7ERU9 68 aa3.54□□□□□ -1.84
SCLT1-207ENST00000506233 HRCT1Q6UXD1 115 aa3.54□□□□□ -1.84
SCLT1-207ENST00000506233 RTL8CO15255 209 aa3.54□□□□□ -1.84
SCLT1-207ENST00000506233 ZNF73O43830 326 aaPredicted RBP3.54□□□□□ -1.84
SCLT1-207ENST00000506233 A0A0G2JQZ4 141 aa3.54□□□□□ -1.84
SCLT1-207ENST00000506233 LCE5AQ5TCM9 118 aa3.54□□□□□ -1.84
SCLT1-207ENST00000506233 CAMK2N2Q96S95 79 aa3.54□□□□□ -1.84
SCLT1-207ENST00000506233 TMEM126AQ9H061 195 aa3.54□□□□□ -1.84
SCLT1-207ENST00000506233 C14orf132Q9NPU4 83 aa3.54□□□□□ -1.84
SCLT1-207ENST00000506233 Q6ZSA8 131 aa3.53□□□□□ -1.84
SCLT1-207ENST00000506233 SYCNQ0VAF6 134 aa3.53□□□□□ -1.84
SCLT1-207ENST00000506233 C3orf22Q8N5N4 141 aa3.53□□□□□ -1.84
SCLT1-207ENST00000506233 PCLOQ9Y6V0 5065 aa3.53□□□□□ -1.84
SCLT1-207ENST00000506233 NBDYA0A0U1RRE5 68 aa3.52□□□□□ -1.85
SCLT1-207ENST00000506233 CRPP02741 224 aa3.52□□□□□ -1.85
SCLT1-207ENST00000506233 CCKP06307 115 aa3.52□□□□□ -1.85
SCLT1-207ENST00000506233 Q6ZRX8 168 aa3.52□□□□□ -1.85
SCLT1-207ENST00000506233 MUC17Q685J3 4493 aa3.52□□□□□ -1.85
SCLT1-207ENST00000506233 KRTAP29-1A8MX34 341 aaPredicted RBP3.52□□□□□ -1.85
SCLT1-207ENST00000506233 C9orf163Q8N9P6 203 aa3.52□□□□□ -1.85
SCLT1-207ENST00000506233 A0A1W2PNM2 257 aa3.52□□□□□ -1.85
SCLT1-207ENST00000506233 C16orf90A8MZG2 172 aa3.52□□□□□ -1.85
SCLT1-207ENST00000506233 Q6Q795 121 aa3.52□□□□□ -1.85
SCLT1-207ENST00000506233 VPS25Q9BRG1 176 aa3.52□□□□□ -1.85
SCLT1-207ENST00000506233 H0YGX0 51 aa3.51□□□□□ -1.85
SCLT1-207ENST00000506233 CAMK2N1Q7Z7J9 78 aa3.51□□□□□ -1.85
SCLT1-207ENST00000506233 Q96NJ1 140 aa3.51□□□□□ -1.85
SCLT1-207ENST00000506233 IGKV2D-24A0A075B6R9 120 aa3.51□□□□□ -1.85
SCLT1-207ENST00000506233 A0A1B0GVY2 172 aa3.51□□□□□ -1.85
SCLT1-207ENST00000506233 Q6ZQY7 126 aa3.5□□□□□ -1.85
SCLT1-207ENST00000506233 HERC2O95714 4834 aa3.49□□□□□ -1.85
SCLT1-207ENST00000506233 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.49□□□□□ -1.85
SCLT1-207ENST00000506233 PHF5AQ7RTV0 110 aaKnown RBP3.49□□□□□ -1.85
SCLT1-207ENST00000506233 A0A087WTM6 91 aa3.49□□□□□ -1.85
SCLT1-207ENST00000506233 hADV29S1A0JD25 119 aa3.49□□□□□ -1.85
SCLT1-207ENST00000506233 SPRR1BP22528 89 aa3.49□□□□□ -1.85
SCLT1-207ENST00000506233 C14orf177Q52M58 125 aa3.49□□□□□ -1.85
SCLT1-207ENST00000506233 SPRR4Q96PI1 79 aa3.49□□□□□ -1.85
SCLT1-207ENST00000506233 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
SCLT1-207ENST00000506233 UBE2AP49459 152 aa3.48□□□□□ -1.85
SCLT1-207ENST00000506233 LINC00483Q53H64 154 aa3.48□□□□□ -1.85
SCLT1-207ENST00000506233 A0A087WVE0 104 aa3.47□□□□□ -1.85
SCLT1-207ENST00000506233 ORMDL1Q9P0S3 153 aa3.47□□□□□ -1.85
SCLT1-207ENST00000506233 IGKV2D-30A0A075B6S6 120 aa3.47□□□□□ -1.85
SCLT1-207ENST00000506233 LOC107984640A0A0U1RRK4 108 aa3.47□□□□□ -1.85
SCLT1-207ENST00000506233 PLAC8Q9NZF1 115 aa3.47□□□□□ -1.85
SCLT1-207ENST00000506233 LRP2P98164 4655 aa3.46□□□□□ -1.85
SCLT1-207ENST00000506233 CCDC179H3BU77 68 aa3.46□□□□□ -1.86
SCLT1-207ENST00000506233 ASB16-AS1Q495Z4 193 aa3.46□□□□□ -1.86
SCLT1-207ENST00000506233 COPS9Q8WXC6 57 aa3.46□□□□□ -1.86
SCLT1-207ENST00000506233 LYRM7Q5U5X0 104 aa3.46□□□□□ -1.86
SCLT1-207ENST00000506233 BIRC6Q9NR09 4857 aa3.46□□□□□ -1.86
SCLT1-207ENST00000506233 LCE6AA0A183 80 aa3.45□□□□□ -1.86
SCLT1-207ENST00000506233 KRTAP1-4P0C5Y4 121 aa3.45□□□□□ -1.86
SCLT1-207ENST00000506233 DSCR10P59022 87 aa3.45□□□□□ -1.86
SCLT1-207ENST00000506233 Q5XG85 94 aa3.45□□□□□ -1.86
SCLT1-207ENST00000506233 TMEM256-PLSCR3K7ERE1 68 aa3.45□□□□□ -1.86
SCLT1-207ENST00000506233 MUC2Q02817 5179 aa3.45□□□□□ -1.86
SCLT1-207ENST00000506233 COX7BP24311 80 aa3.45□□□□□ -1.86
SCLT1-207ENST00000506233 KRTAP10-1P60331 282 aa3.45□□□□□ -1.86
SCLT1-207ENST00000506233 DIRC1Q969H9 104 aa3.45□□□□□ -1.86
SCLT1-207ENST00000506233 A8MWP4 228 aa3.44□□□□□ -1.86
SCLT1-207ENST00000506233 IGKV4-1P06312 121 aa3.44□□□□□ -1.86
SCLT1-207ENST00000506233 COX6CP09669 75 aa3.44□□□□□ -1.86
SCLT1-207ENST00000506233 BPY2O14599 106 aa3.44□□□□□ -1.86
SCLT1-207ENST00000506233 Q6JHZ5 121 aa3.44□□□□□ -1.86
SCLT1-207ENST00000506233 XP32Q5T750 250 aa3.43□□□□□ -1.86
SCLT1-207ENST00000506233 IGFL1Q6UW32 110 aa3.43□□□□□ -1.86
SCLT1-207ENST00000506233 FLGP20930 4061 aaPredicted RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms