RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 NCR3O14931 201 aa5.54□□□□□ -1.52
NEDD9-210ENST00000505589 Q1RN00 199 aa5.54□□□□□ -1.52
NEDD9-210ENST00000505589 A0A1W2PPM0 123 aa5.53□□□□□ -1.52
NEDD9-210ENST00000505589 H3BUT2 72 aa5.53□□□□□ -1.52
NEDD9-210ENST00000505589 NAA38Q9BRA0 125 aaKnown RBP5.53□□□□□ -1.52
NEDD9-210ENST00000505589 A0A1B0GV90 55 aa5.52□□□□□ -1.53
NEDD9-210ENST00000505589 PRYO14603 147 aa5.52□□□□□ -1.53
NEDD9-210ENST00000505589 OR13C6PQ8NH95 151 aa5.52□□□□□ -1.53
NEDD9-210ENST00000505589 SMCR5Q8TEV8 140 aa5.52□□□□□ -1.53
NEDD9-210ENST00000505589 KRTAP4-1Q9BYQ7 146 aa5.52□□□□□ -1.53
NEDD9-210ENST00000505589 ETDCA0A1B0GVM5 59 aa5.51□□□□□ -1.53
NEDD9-210ENST00000505589 IGLV6-57P01721 117 aa5.51□□□□□ -1.53
NEDD9-210ENST00000505589 FABP2P12104 132 aa5.51□□□□□ -1.53
NEDD9-210ENST00000505589 LYRM7Q5U5X0 104 aa5.51□□□□□ -1.53
NEDD9-210ENST00000505589 Q8N377 158 aa5.51□□□□□ -1.53
NEDD9-210ENST00000505589 TRIAP1O43715 76 aa5.5□□□□□ -1.53
NEDD9-210ENST00000505589 PSMB2P49721 201 aa5.5□□□□□ -1.53
NEDD9-210ENST00000505589 LINC00483Q53H64 154 aa5.5□□□□□ -1.53
NEDD9-210ENST00000505589 S100A7L2Q5SY68 101 aa5.5□□□□□ -1.53
NEDD9-210ENST00000505589 TRBV10-3A0A0K0K1G6 114 aa5.49□□□□□ -1.53
NEDD9-210ENST00000505589 VAMP3Q15836 100 aa5.49□□□□□ -1.53
NEDD9-210ENST00000505589 GAGE2AQ6NT46 116 aa5.49□□□□□ -1.53
NEDD9-210ENST00000505589 SMIM11BQ8TCY0 68 aa5.49□□□□□ -1.53
NEDD9-210ENST00000505589 KCNQ1DNQ9H478 68 aa5.49□□□□□ -1.53
NEDD9-210ENST00000505589 TRAV23DV6A0A075B6W5 121 aa5.48□□□□□ -1.53
NEDD9-210ENST00000505589 K7EP34 96 aa5.48□□□□□ -1.53
NEDD9-210ENST00000505589 COX6CP09669 75 aa5.48□□□□□ -1.53
NEDD9-210ENST00000505589 CBY1Q9Y3M2 126 aa5.48□□□□□ -1.53
NEDD9-210ENST00000505589 IGLV9-49A0A0B4J1Y8 123 aa5.47□□□□□ -1.53
NEDD9-210ENST00000505589 SPRR1AP35321 89 aa5.47□□□□□ -1.53
NEDD9-210ENST00000505589 MOBPQ13875 183 aa5.47□□□□□ -1.53
NEDD9-210ENST00000505589 SPCS1Q9Y6A9 102 aa5.47□□□□□ -1.53
NEDD9-210ENST00000505589 IGLV8-61A0A075B6I0 122 aa5.46□□□□□ -1.54
NEDD9-210ENST00000505589 TRBV20-1A0A075B6N2 111 aa5.46□□□□□ -1.54
NEDD9-210ENST00000505589 M0R2T5 61 aa5.46□□□□□ -1.54
NEDD9-210ENST00000505589 SCGB1C2P0DMR2 95 aa5.46□□□□□ -1.54
NEDD9-210ENST00000505589 MT1HP80294 61 aa5.46□□□□□ -1.54
NEDD9-210ENST00000505589 GTF2H5Q6ZYL4 71 aa5.46□□□□□ -1.54
NEDD9-210ENST00000505589 TCL1BO95988 128 aa5.45□□□□□ -1.54
NEDD9-210ENST00000505589 LIMD2Q9BT23 127 aa5.45□□□□□ -1.54
NEDD9-210ENST00000505589 TRBV7-6A0A0J9YX20 115 aa5.44□□□□□ -1.54
NEDD9-210ENST00000505589 H0YGX0 51 aa5.44□□□□□ -1.54
NEDD9-210ENST00000505589 LST1O00453 97 aa5.44□□□□□ -1.54
NEDD9-210ENST00000505589 ZNF73O43830 326 aaPredicted RBP5.44□□□□□ -1.54
NEDD9-210ENST00000505589 ATXN8Q156A1 80 aa5.44□□□□□ -1.54
NEDD9-210ENST00000505589 C6orf99Q4VX62 202 aa5.44□□□□□ -1.54
NEDD9-210ENST00000505589 CLEC2BQ92478 149 aa5.44□□□□□ -1.54
NEDD9-210ENST00000505589 KRTAP4-16G5E9R7 235 aaPredicted RBP5.43□□□□□ -1.54
NEDD9-210ENST00000505589 UBE2V1Q13404 147 aa5.43□□□□□ -1.54
NEDD9-210ENST00000505589 PCOTHQ58A44 107 aa5.43□□□□□ -1.54
NEDD9-210ENST00000505589 B5MCH6 92 aa5.42□□□□□ -1.54
NEDD9-210ENST00000505589 H3BMG7 143 aa5.42□□□□□ -1.54
NEDD9-210ENST00000505589 C9orf153Q5TBE3 101 aa5.42□□□□□ -1.54
NEDD9-210ENST00000505589 FAM218AQ96MZ4 157 aa5.42□□□□□ -1.54
NEDD9-210ENST00000505589 TRACP01848 142 aa5.41□□□□□ -1.54
NEDD9-210ENST00000505589 COX7BP24311 80 aa5.41□□□□□ -1.54
NEDD9-210ENST00000505589 ELOF1P60002 83 aaKnown RBP5.41□□□□□ -1.54
NEDD9-210ENST00000505589 KRTAP10-6P60371 365 aaPredicted RBP5.41□□□□□ -1.54
NEDD9-210ENST00000505589 A0A1B0GX51 115 aa5.4□□□□□ -1.54
NEDD9-210ENST00000505589 KRTAP19-2Q3LHN2 52 aa5.4□□□□□ -1.54
NEDD9-210ENST00000505589 COX6B2Q6YFQ2 88 aa5.4□□□□□ -1.54
NEDD9-210ENST00000505589 LINC00575Q6W349 94 aa5.39□□□□□ -1.55
NEDD9-210ENST00000505589 Q6ZRX8 168 aa5.39□□□□□ -1.55
NEDD9-210ENST00000505589 C9JAW5 83 aa5.38□□□□□ -1.55
NEDD9-210ENST00000505589 DNAL4O96015 105 aa5.38□□□□□ -1.55
NEDD9-210ENST00000505589 GHRHP01286 108 aa5.38□□□□□ -1.55
NEDD9-210ENST00000505589 LCE1DQ5T752 114 aa5.38□□□□□ -1.55
NEDD9-210ENST00000505589 PRO0461Q9UI25 63 aa5.38□□□□□ -1.55
NEDD9-210ENST00000505589 SNCGO76070 127 aa5.37□□□□□ -1.55
NEDD9-210ENST00000505589 KRTAP4-7Q9BYR0 210 aa5.37□□□□□ -1.55
NEDD9-210ENST00000505589 hADV29S1A0JD25 119 aa5.36□□□□□ -1.55
NEDD9-210ENST00000505589 F8W1H4 67 aa5.36□□□□□ -1.55
NEDD9-210ENST00000505589 ERC2-IT1O76042 136 aa5.36□□□□□ -1.55
NEDD9-210ENST00000505589 MTURNQ8N3F0 131 aa5.36□□□□□ -1.55
NEDD9-210ENST00000505589 DHRS4-AS1Q9P1J3 65 aa5.36□□□□□ -1.55
NEDD9-210ENST00000505589 C9orf92A6NGG3 77 aa5.35□□□□□ -1.55
NEDD9-210ENST00000505589 KRTAP9-7A8MTY7 169 aa5.35□□□□□ -1.55
NEDD9-210ENST00000505589 H3BT86 120 aa5.35□□□□□ -1.55
NEDD9-210ENST00000505589 Q9BRP9 147 aa5.35□□□□□ -1.55
NEDD9-210ENST00000505589 LAMTOR3Q9UHA4 124 aa5.35□□□□□ -1.55
NEDD9-210ENST00000505589 CD164Q04900 197 aa5.34□□□□□ -1.55
NEDD9-210ENST00000505589 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.34□□□□□ -1.55
NEDD9-210ENST00000505589 ORMDL1Q9P0S3 153 aa5.34□□□□□ -1.55
NEDD9-210ENST00000505589 Q6ZQY7 126 aa5.33□□□□□ -1.56
NEDD9-210ENST00000505589 ANKRD29Q8N6D5 301 aa5.33□□□□□ -1.56
NEDD9-210ENST00000505589 BAALC-AS2P0C853 105 aa5.32□□□□□ -1.56
NEDD9-210ENST00000505589 OCIAD2Q56VL3 154 aa5.32□□□□□ -1.56
NEDD9-210ENST00000505589 H3BQ85 93 aa5.31□□□□□ -1.56
NEDD9-210ENST00000505589 SPRR1BP22528 89 aa5.31□□□□□ -1.56
NEDD9-210ENST00000505589 HRCT1Q6UXD1 115 aa5.31□□□□□ -1.56
NEDD9-210ENST00000505589 Q5XG85 94 aa5.3□□□□□ -1.56
NEDD9-210ENST00000505589 TEN1Q86WV5 123 aa5.3□□□□□ -1.56
NEDD9-210ENST00000505589 IGLV5-48A0A075B6I7 105 aa5.29□□□□□ -1.56
NEDD9-210ENST00000505589 TMEM256-PLSCR3K7ERE1 68 aa5.29□□□□□ -1.56
NEDD9-210ENST00000505589 RPL37P61927 97 aaKnown RBP5.29□□□□□ -1.56
NEDD9-210ENST00000505589 ETDBQ3ZM63 59 aa5.29□□□□□ -1.56
NEDD9-210ENST00000505589 PPDPFLQ8WWR9 84 aa5.29□□□□□ -1.56
NEDD9-210ENST00000505589 FLGP20930 4061 aaPredicted RBP5.27□□□□□ -1.57
NEDD9-210ENST00000505589 ST20-AS1Q8NBB2 130 aa5.27□□□□□ -1.57
NEDD9-210ENST00000505589 TEX49A0A1B0GTD5 131 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms