RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 HIGD2AQ9BW72 106 aa4.76□□□□□ -1.65
CDC42SE2-208ENST00000505065 FLG2Q5D862 2391 aaPredicted RBP4.76□□□□□ -1.65
CDC42SE2-208ENST00000505065 UBE2V1Q13404 147 aa4.75□□□□□ -1.65
CDC42SE2-208ENST00000505065 ANAPC11Q9NYG5 84 aa4.75□□□□□ -1.65
CDC42SE2-208ENST00000505065 TCL1BO95988 128 aa4.75□□□□□ -1.65
CDC42SE2-208ENST00000505065 A0A1W2PPM0 123 aa4.74□□□□□ -1.65
CDC42SE2-208ENST00000505065 BATFQ16520 125 aa4.74□□□□□ -1.65
CDC42SE2-208ENST00000505065 SPAG11AQ6PDA7 123 aa4.74□□□□□ -1.65
CDC42SE2-208ENST00000505065 Q6ZQY7 126 aa4.74□□□□□ -1.65
CDC42SE2-208ENST00000505065 CLEC2BQ92478 149 aa4.74□□□□□ -1.65
CDC42SE2-208ENST00000505065 TRBV20-1A0A075B6N2 111 aa4.74□□□□□ -1.65
CDC42SE2-208ENST00000505065 PRO0461Q9UI25 63 aa4.74□□□□□ -1.65
CDC42SE2-208ENST00000505065 COL5A1-AS1Q5SY13 56 aa4.72□□□□□ -1.65
CDC42SE2-208ENST00000505065 TYMSOSQ8TAI1 123 aa4.72□□□□□ -1.65
CDC42SE2-208ENST00000505065 TRBV7-4A0A0J9YYF1 115 aa4.72□□□□□ -1.65
CDC42SE2-208ENST00000505065 SPINK1P00995 79 aa4.72□□□□□ -1.65
CDC42SE2-208ENST00000505065 SLC25A20O43772 301 aa4.72□□□□□ -1.65
CDC42SE2-208ENST00000505065 GAGE2AQ6NT46 116 aa4.71□□□□□ -1.66
CDC42SE2-208ENST00000505065 VPS25Q9BRG1 176 aa4.71□□□□□ -1.66
CDC42SE2-208ENST00000505065 Q6JHZ5 121 aa4.71□□□□□ -1.66
CDC42SE2-208ENST00000505065 LPAP08519 4548 aa4.71□□□□□ -1.66
CDC42SE2-208ENST00000505065 COX6CP09669 75 aa4.71□□□□□ -1.66
CDC42SE2-208ENST00000505065 LAMTOR3Q9UHA4 124 aa4.71□□□□□ -1.66
CDC42SE2-208ENST00000505065 ATXN8Q156A1 80 aa4.7□□□□□ -1.66
CDC42SE2-208ENST00000505065 LINC00304Q8N9R0 145 aa4.7□□□□□ -1.66
CDC42SE2-208ENST00000505065 TMEM256-PLSCR3K7ERE1 68 aa4.7□□□□□ -1.66
CDC42SE2-208ENST00000505065 IGFL1Q6UW32 110 aa4.7□□□□□ -1.66
CDC42SE2-208ENST00000505065 LOC110117498A0A087WWA1 95 aa4.69□□□□□ -1.66
CDC42SE2-208ENST00000505065 GHRHP01286 108 aa4.69□□□□□ -1.66
CDC42SE2-208ENST00000505065 ORMDL1Q9P0S3 153 aa4.69□□□□□ -1.66
CDC42SE2-208ENST00000505065 H7C2G1 150 aa4.69□□□□□ -1.66
CDC42SE2-208ENST00000505065 NDUFV3P56181 108 aaKnown RBP4.69□□□□□ -1.66
CDC42SE2-208ENST00000505065 MOBPQ13875 183 aa4.69□□□□□ -1.66
CDC42SE2-208ENST00000505065 LYRM7Q5U5X0 104 aa4.69□□□□□ -1.66
CDC42SE2-208ENST00000505065 SMCPP49901 116 aaPredicted RBP4.68□□□□□ -1.66
CDC42SE2-208ENST00000505065 FP248Q71RG6 208 aaPredicted RBP4.68□□□□□ -1.66
CDC42SE2-208ENST00000505065 H3BT86 120 aa4.68□□□□□ -1.66
CDC42SE2-208ENST00000505065 H3BUT2 72 aa4.68□□□□□ -1.66
CDC42SE2-208ENST00000505065 Q1RN00 199 aa4.68□□□□□ -1.66
CDC42SE2-208ENST00000505065 A0A1B0GW54 56 aa4.67□□□□□ -1.66
CDC42SE2-208ENST00000505065 K7EP34 96 aa4.67□□□□□ -1.66
CDC42SE2-208ENST00000505065 Q96NJ1 140 aa4.67□□□□□ -1.66
CDC42SE2-208ENST00000505065 TRBV7-7A0A0K0K1E9 115 aa4.67□□□□□ -1.66
CDC42SE2-208ENST00000505065 PSMB2P49721 201 aa4.66□□□□□ -1.66
CDC42SE2-208ENST00000505065 A0A1W2PNM2 257 aa4.65□□□□□ -1.66
CDC42SE2-208ENST00000505065 TPRXLQ17RH7 258 aa4.65□□□□□ -1.67
CDC42SE2-208ENST00000505065 SNCGO76070 127 aa4.65□□□□□ -1.67
CDC42SE2-208ENST00000505065 J3QL48 77 aa4.64□□□□□ -1.67
CDC42SE2-208ENST00000505065 NAA38Q9BRA0 125 aaKnown RBP4.64□□□□□ -1.67
CDC42SE2-208ENST00000505065 IGLV9-49A0A0B4J1Y8 123 aa4.64□□□□□ -1.67
CDC42SE2-208ENST00000505065 FABP2P12104 132 aa4.64□□□□□ -1.67
CDC42SE2-208ENST00000505065 Q6ZQT0 140 aa4.64□□□□□ -1.67
CDC42SE2-208ENST00000505065 TEN1Q86WV5 123 aa4.64□□□□□ -1.67
CDC42SE2-208ENST00000505065 BAALC-AS2P0C853 105 aa4.63□□□□□ -1.67
CDC42SE2-208ENST00000505065 KRTAP13-3Q3SY46 172 aa4.63□□□□□ -1.67
CDC42SE2-208ENST00000505065 DEFB105AQ8NG35 78 aa4.62□□□□□ -1.67
CDC42SE2-208ENST00000505065 JMJD7-PLA2G4BH0Y9G9 81 aa4.61□□□□□ -1.67
CDC42SE2-208ENST00000505065 C1orf195Q5TG92 126 aa4.61□□□□□ -1.67
CDC42SE2-208ENST00000505065 LIMD2Q9BT23 127 aa4.61□□□□□ -1.67
CDC42SE2-208ENST00000505065 DNAL4O96015 105 aa4.61□□□□□ -1.67
CDC42SE2-208ENST00000505065 ANKRD29Q8N6D5 301 aa4.61□□□□□ -1.67
CDC42SE2-208ENST00000505065 H3BMG7 143 aa4.61□□□□□ -1.67
CDC42SE2-208ENST00000505065 SPCS1Q9Y6A9 102 aa4.61□□□□□ -1.67
CDC42SE2-208ENST00000505065 SCGB1C2P0DMR2 95 aa4.6□□□□□ -1.67
CDC42SE2-208ENST00000505065 C9orf153Q5TBE3 101 aa4.6□□□□□ -1.67
CDC42SE2-208ENST00000505065 PDE6GP18545 87 aa4.6□□□□□ -1.67
CDC42SE2-208ENST00000505065 LINC00472Q9H8W2 130 aa4.6□□□□□ -1.67
CDC42SE2-208ENST00000505065 A0A0G2JQZ4 141 aa4.59□□□□□ -1.67
CDC42SE2-208ENST00000505065 F8W1H4 67 aa4.59□□□□□ -1.68
CDC42SE2-208ENST00000505065 C9JAW5 83 aa4.58□□□□□ -1.68
CDC42SE2-208ENST00000505065 F8WEM9 126 aa4.58□□□□□ -1.68
CDC42SE2-208ENST00000505065 K7ERU9 68 aa4.58□□□□□ -1.68
CDC42SE2-208ENST00000505065 XP32Q5T750 250 aa4.58□□□□□ -1.68
CDC42SE2-208ENST00000505065 LRP2P98164 4655 aa4.58□□□□□ -1.68
CDC42SE2-208ENST00000505065 RBM3P98179 157 aaKnown RBP4.58□□□□□ -1.68
CDC42SE2-208ENST00000505065 DMBT1Q9UGM3 2413 aaPredicted RBP4.56□□□□□ -1.68
CDC42SE2-208ENST00000505065 CCKP06307 115 aa4.56□□□□□ -1.68
CDC42SE2-208ENST00000505065 GTF2H5Q6ZYL4 71 aa4.55□□□□□ -1.68
CDC42SE2-208ENST00000505065 KRTAP16-1A8MUX0 517 aa4.55□□□□□ -1.68
CDC42SE2-208ENST00000505065 A0A1B0GV72 72 aa4.54□□□□□ -1.68
CDC42SE2-208ENST00000505065 SS18L2Q9UHA2 77 aa4.53□□□□□ -1.68
CDC42SE2-208ENST00000505065 C4orf48Q5BLP8 95 aa4.53□□□□□ -1.68
CDC42SE2-208ENST00000505065 UBR4Q5T4S7 5183 aa4.53□□□□□ -1.68
CDC42SE2-208ENST00000505065 DSCR8Q96T75 97 aa4.52□□□□□ -1.69
CDC42SE2-208ENST00000505065 SCGB1A1P11684 91 aa4.51□□□□□ -1.69
CDC42SE2-208ENST00000505065 RNF213Q63HN8 5207 aa4.51□□□□□ -1.69
CDC42SE2-208ENST00000505065 IGLV7-46A0A075B6I9 117 aa4.51□□□□□ -1.69
CDC42SE2-208ENST00000505065 C14orf132Q9NPU4 83 aa4.51□□□□□ -1.69
CDC42SE2-208ENST00000505065 FAM240AA0A1B0GVK7 77 aa4.5□□□□□ -1.69
CDC42SE2-208ENST00000505065 C20orf166-AS1Q96NR2 134 aa4.5□□□□□ -1.69
CDC42SE2-208ENST00000505065 RETNLBQ9BQ08 111 aa4.5□□□□□ -1.69
CDC42SE2-208ENST00000505065 A0A087WSZ3 146 aa4.49□□□□□ -1.69
CDC42SE2-208ENST00000505065 SIGMAR1Q99720 223 aa4.49□□□□□ -1.69
CDC42SE2-208ENST00000505065 A8MUU9 505 aa4.48□□□□□ -1.69
CDC42SE2-208ENST00000505065 HRCT1Q6UXD1 115 aa4.48□□□□□ -1.69
CDC42SE2-208ENST00000505065 MTURNQ8N3F0 131 aa4.48□□□□□ -1.69
CDC42SE2-208ENST00000505065 J3KT08 172 aa4.48□□□□□ -1.69
CDC42SE2-208ENST00000505065 Q75L30 129 aa4.47□□□□□ -1.69
CDC42SE2-208ENST00000505065 FLGP20930 4061 aaPredicted RBP4.46□□□□□ -1.69
CDC42SE2-208ENST00000505065 DSCR10P59022 87 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms