RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 VPREB1P12018 145 aa2.85□□□□□ -1.95
CDH9-203ENST00000505045 HERVK_113P61574 105 aa2.85□□□□□ -1.95
CDH9-203ENST00000505045 PRLHP81277 87 aa2.85□□□□□ -1.95
CDH9-203ENST00000505045 KRTAP13-2Q52LG2 175 aa2.85□□□□□ -1.95
CDH9-203ENST00000505045 PLEKHB2Q96CS7 222 aa2.85□□□□□ -1.95
CDH9-203ENST00000505045 SND1-IT1Q9HBX3 110 aa2.85□□□□□ -1.95
CDH9-203ENST00000505045 KRTAP5-8O75690 187 aa2.84□□□□□ -1.95
CDH9-203ENST00000505045 SCGB1D4Q6XE38 83 aa2.84□□□□□ -1.95
CDH9-203ENST00000505045 ANKRD29Q8N6D5 301 aa2.84□□□□□ -1.95
CDH9-203ENST00000505045 SNCGO76070 127 aa2.84□□□□□ -1.96
CDH9-203ENST00000505045 CFC1BP0CG36 223 aa2.84□□□□□ -1.96
CDH9-203ENST00000505045 CFC1P0CG37 223 aa2.84□□□□□ -1.96
CDH9-203ENST00000505045 IFITM1P13164 125 aa2.84□□□□□ -1.96
CDH9-203ENST00000505045 NDUFV3P56181 108 aaKnown RBP2.84□□□□□ -1.96
CDH9-203ENST00000505045 TMEM170BQ5T4T1 132 aa2.84□□□□□ -1.96
CDH9-203ENST00000505045 PRO1854Q9UHT4 67 aa2.84□□□□□ -1.96
CDH9-203ENST00000505045 A0A0U1RRA0 63 aa2.83□□□□□ -1.96
CDH9-203ENST00000505045 M0R378 163 aa2.83□□□□□ -1.96
CDH9-203ENST00000505045 SLC25A20O43772 301 aa2.83□□□□□ -1.96
CDH9-203ENST00000505045 RPL13AP40429 203 aaKnown RBP2.83□□□□□ -1.96
CDH9-203ENST00000505045 RPL28P46779 137 aaKnown RBP2.83□□□□□ -1.96
CDH9-203ENST00000505045 TSPEAR-AS2P59090 65 aa2.83□□□□□ -1.96
CDH9-203ENST00000505045 NKAPP1Q8N9T2 125 aa2.83□□□□□ -1.96
CDH9-203ENST00000505045 TMEM126AQ9H061 195 aa2.83□□□□□ -1.96
CDH9-203ENST00000505045 A0A0B4J2C4 111 aa2.82□□□□□ -1.96
CDH9-203ENST00000505045 TMEM223A0PJW6 202 aa2.82□□□□□ -1.96
CDH9-203ENST00000505045 C9JAW5 83 aa2.82□□□□□ -1.96
CDH9-203ENST00000505045 CCDC179H3BU77 68 aa2.82□□□□□ -1.96
CDH9-203ENST00000505045 ATXN8Q156A1 80 aa2.82□□□□□ -1.96
CDH9-203ENST00000505045 PRR4Q16378 134 aa2.82□□□□□ -1.96
CDH9-203ENST00000505045 RETNLBQ9BQ08 111 aa2.82□□□□□ -1.96
CDH9-203ENST00000505045 FAT4Q6V0I7 4981 aa2.82□□□□□ -1.96
CDH9-203ENST00000505045 TRBV10-2A0A0K0K1G8 114 aa2.82□□□□□ -1.96
CDH9-203ENST00000505045 LEPROTO15243 131 aa2.82□□□□□ -1.96
CDH9-203ENST00000505045 UBE2AP49459 152 aa2.82□□□□□ -1.96
CDH9-203ENST00000505045 HERV-K104P63124 156 aa2.82□□□□□ -1.96
CDH9-203ENST00000505045 SFTA2Q6UW10 78 aa2.82□□□□□ -1.96
CDH9-203ENST00000505045 FAM19A1Q7Z5A9 133 aa2.82□□□□□ -1.96
CDH9-203ENST00000505045 SPANXDQ9BXN6 97 aa2.82□□□□□ -1.96
CDH9-203ENST00000505045 CRYGAP11844 174 aa2.81□□□□□ -1.96
CDH9-203ENST00000505045 LGALS3P17931 250 aaKnown RBP2.81□□□□□ -1.96
CDH9-203ENST00000505045 SMIM20Q8N5G0 67 aa2.81□□□□□ -1.96
CDH9-203ENST00000505045 C3orf22Q8N5N4 141 aa2.81□□□□□ -1.96
CDH9-203ENST00000505045 TYMSOSQ8TAI1 123 aa2.81□□□□□ -1.96
CDH9-203ENST00000505045 A4D1N5 150 aa2.8□□□□□ -1.96
CDH9-203ENST00000505045 J3QQQ9 107 aa2.8□□□□□ -1.96
CDH9-203ENST00000505045 NCR3O14931 201 aa2.8□□□□□ -1.96
CDH9-203ENST00000505045 LINC00158P58513 81 aa2.8□□□□□ -1.96
CDH9-203ENST00000505045 COX17Q14061 63 aa2.8□□□□□ -1.96
CDH9-203ENST00000505045 MUSTN1Q8IVN3 82 aa2.8□□□□□ -1.96
CDH9-203ENST00000505045 DAND5Q8N907 189 aa2.8□□□□□ -1.96
CDH9-203ENST00000505045 H3BT86 120 aa2.79□□□□□ -1.96
CDH9-203ENST00000505045 MEIG1Q5JSS6 88 aa2.79□□□□□ -1.96
CDH9-203ENST00000505045 MIR7-3HGQ8N6C7 128 aa2.79□□□□□ -1.96
CDH9-203ENST00000505045 HIGD2AQ9BW72 106 aa2.79□□□□□ -1.96
CDH9-203ENST00000505045 MUC17Q685J3 4493 aa2.79□□□□□ -1.96
CDH9-203ENST00000505045 TRBV7-7A0A0K0K1E9 115 aa2.79□□□□□ -1.96
CDH9-203ENST00000505045 FAM240AA0A1B0GVK7 77 aa2.79□□□□□ -1.96
CDH9-203ENST00000505045 KRTAP4-16G5E9R7 235 aaPredicted RBP2.79□□□□□ -1.96
CDH9-203ENST00000505045 Q1RN00 199 aa2.79□□□□□ -1.96
CDH9-203ENST00000505045 FAM229BQ4G0N7 80 aa2.79□□□□□ -1.96
CDH9-203ENST00000505045 SMIM29Q86T20 159 aa2.79□□□□□ -1.96
CDH9-203ENST00000505045 LINC00304Q8N9R0 145 aa2.79□□□□□ -1.96
CDH9-203ENST00000505045 NDUFA12Q9UI09 145 aa2.79□□□□□ -1.96
CDH9-203ENST00000505045 TRBV10-3A0A0K0K1G6 114 aa2.78□□□□□ -1.96
CDH9-203ENST00000505045 ACYP1P07311 99 aa2.78□□□□□ -1.96
CDH9-203ENST00000505045 COX6CP09669 75 aa2.78□□□□□ -1.96
CDH9-203ENST00000505045 SPRR1AP35321 89 aa2.78□□□□□ -1.96
CDH9-203ENST00000505045 SPRR4Q96PI1 79 aa2.78□□□□□ -1.96
CDH9-203ENST00000505045 IMUPQ9GZP8 106 aa2.78□□□□□ -1.96
CDH9-203ENST00000505045 SPANXCQ9NY87 97 aa2.78□□□□□ -1.96
CDH9-203ENST00000505045 A0A0J9YXY3 114 aa2.77□□□□□ -1.97
CDH9-203ENST00000505045 TEX49A0A1B0GTD5 131 aa2.77□□□□□ -1.97
CDH9-203ENST00000505045 H7C2G1 150 aa2.77□□□□□ -1.97
CDH9-203ENST00000505045 SOSTDC1Q6X4U4 206 aa2.77□□□□□ -1.97
CDH9-203ENST00000505045 SMCR5Q8TEV8 140 aa2.77□□□□□ -1.97
CDH9-203ENST00000505045 LST1O00453 97 aa2.77□□□□□ -1.97
CDH9-203ENST00000505045 ERC2-IT1O76042 136 aa2.77□□□□□ -1.97
CDH9-203ENST00000505045 LCE1FQ5T754 118 aa2.77□□□□□ -1.97
CDH9-203ENST00000505045 PPDPFQ9H3Y8 114 aa2.77□□□□□ -1.97
CDH9-203ENST00000505045 KCNQ1DNQ9H478 68 aa2.77□□□□□ -1.97
CDH9-203ENST00000505045 TIMM17BO60830 172 aa2.76□□□□□ -1.97
CDH9-203ENST00000505045 NPC2P61916 151 aa2.76□□□□□ -1.97
CDH9-203ENST00000505045 LITAFQ99732 161 aa2.76□□□□□ -1.97
CDH9-203ENST00000505045 Q9BRP9 147 aa2.76□□□□□ -1.97
CDH9-203ENST00000505045 ADAMTSL4-AS1Q5T5F5 129 aa2.75□□□□□ -1.97
CDH9-203ENST00000505045 C9orf153Q5TBE3 101 aa2.75□□□□□ -1.97
CDH9-203ENST00000505045 LINC00337Q8N6G1 96 aa2.75□□□□□ -1.97
CDH9-203ENST00000505045 Q8NBF4 154 aa2.75□□□□□ -1.97
CDH9-203ENST00000505045 A0A1B0GX51 115 aa2.75□□□□□ -1.97
CDH9-203ENST00000505045 UQCRQO14949 82 aa2.75□□□□□ -1.97
CDH9-203ENST00000505045 TPRXLQ17RH7 258 aa2.75□□□□□ -1.97
CDH9-203ENST00000505045 C5orf47Q569G3 176 aa2.75□□□□□ -1.97
CDH9-203ENST00000505045 LINC00643Q86TS7 51 aa2.75□□□□□ -1.97
CDH9-203ENST00000505045 CLEC2BQ92478 149 aa2.75□□□□□ -1.97
CDH9-203ENST00000505045 IGLV7-46A0A075B6I9 117 aa2.74□□□□□ -1.97
CDH9-203ENST00000505045 FAM236AA0A1B0GUQ0 79 aa2.74□□□□□ -1.97
CDH9-203ENST00000505045 FAM236BA0A1B0GV22 79 aa2.74□□□□□ -1.97
CDH9-203ENST00000505045 ETDCA0A1B0GVM5 59 aa2.74□□□□□ -1.97
CDH9-203ENST00000505045 KRTAP10-12P60413 245 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms