RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 S100A1P23297 94 aa6.53□□□□□ -1.36
MED28-203ENST00000503945 A0A0G2JQZ4 141 aa6.52□□□□□ -1.37
MED28-203ENST00000503945 hADV29S1A0JD25 119 aa6.52□□□□□ -1.37
MED28-203ENST00000503945 F8WEM9 126 aa6.52□□□□□ -1.37
MED28-203ENST00000503945 TCL1BO95988 128 aa6.52□□□□□ -1.37
MED28-203ENST00000503945 C1orf195Q5TG92 126 aa6.52□□□□□ -1.37
MED28-203ENST00000503945 LINC00575Q6W349 94 aa6.52□□□□□ -1.37
MED28-203ENST00000503945 SCGB1D1O95968 90 aa6.51□□□□□ -1.37
MED28-203ENST00000503945 PCOTHQ58A44 107 aa6.51□□□□□ -1.37
MED28-203ENST00000503945 HIST1H4GQ99525 98 aa6.5□□□□□ -1.37
MED28-203ENST00000503945 IGLV8-61A0A075B6I0 122 aa6.49□□□□□ -1.37
MED28-203ENST00000503945 Q6JHZ5 121 aa6.48□□□□□ -1.37
MED28-203ENST00000503945 Q6ZQY7 126 aa6.48□□□□□ -1.37
MED28-203ENST00000503945 OCIAD2Q56VL3 154 aa6.47□□□□□ -1.37
MED28-203ENST00000503945 BVES-AS1Q5T3Y7 98 aa6.47□□□□□ -1.37
MED28-203ENST00000503945 SNCGO76070 127 aa6.46□□□□□ -1.38
MED28-203ENST00000503945 SNHG12Q9BXW3 62 aa6.46□□□□□ -1.38
MED28-203ENST00000503945 COX8AP10176 69 aa6.45□□□□□ -1.38
MED28-203ENST00000503945 KRTAP19-2Q3LHN2 52 aa6.45□□□□□ -1.38
MED28-203ENST00000503945 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.45□□□□□ -1.38
MED28-203ENST00000503945 C12orf57Q99622 126 aa6.45□□□□□ -1.38
MED28-203ENST00000503945 DLEU1O43261 78 aa6.44□□□□□ -1.38
MED28-203ENST00000503945 PPDPFLQ8WWR9 84 aa6.43□□□□□ -1.38
MED28-203ENST00000503945 TRBV7-7A0A0K0K1E9 115 aa6.42□□□□□ -1.38
MED28-203ENST00000503945 TMEM238LA0A1B0GVL6 79 aa6.42□□□□□ -1.38
MED28-203ENST00000503945 IGFL1Q6UW32 110 aa6.42□□□□□ -1.38
MED28-203ENST00000503945 CLEC2BQ92478 149 aa6.42□□□□□ -1.38
MED28-203ENST00000503945 RAB37Q96AX2 223 aa6.42□□□□□ -1.38
MED28-203ENST00000503945 RPL37P61927 97 aaKnown RBP6.41□□□□□ -1.38
MED28-203ENST00000503945 MT1HP80294 61 aa6.41□□□□□ -1.38
MED28-203ENST00000503945 C14orf144Q96I85 54 aa6.41□□□□□ -1.38
MED28-203ENST00000503945 H0YGX0 51 aa6.4□□□□□ -1.38
MED28-203ENST00000503945 CFC1BP0CG36 223 aa6.4□□□□□ -1.38
MED28-203ENST00000503945 CFC1P0CG37 223 aa6.4□□□□□ -1.38
MED28-203ENST00000503945 HIGD1BQ9P298 99 aa6.38□□□□□ -1.39
MED28-203ENST00000503945 LST1O00453 97 aa6.37□□□□□ -1.39
MED28-203ENST00000503945 SPATA45Q537H7 98 aa6.37□□□□□ -1.39
MED28-203ENST00000503945 PAM16Q9Y3D7 125 aa6.37□□□□□ -1.39
MED28-203ENST00000503945 H3BUT2 72 aa6.36□□□□□ -1.39
MED28-203ENST00000503945 ATP11AUNQ6ZP68 121 aa6.36□□□□□ -1.39
MED28-203ENST00000503945 A0A0B4J2C4 111 aa6.35□□□□□ -1.39
MED28-203ENST00000503945 VAMP8Q9BV40 100 aa6.35□□□□□ -1.39
MED28-203ENST00000503945 NDUFV3P56181 108 aaKnown RBP6.34□□□□□ -1.39
MED28-203ENST00000503945 OBSCN-AS1Q96MR7 158 aa6.34□□□□□ -1.39
MED28-203ENST00000503945 KRTAP10-6P60371 365 aaPredicted RBP6.33□□□□□ -1.4
MED28-203ENST00000503945 COX6B2Q6YFQ2 88 aa6.33□□□□□ -1.4
MED28-203ENST00000503945 TEN1Q86WV5 123 aa6.33□□□□□ -1.4
MED28-203ENST00000503945 CEND1Q8N111 149 aa6.33□□□□□ -1.4
MED28-203ENST00000503945 SS18L2Q9UHA2 77 aa6.33□□□□□ -1.4
MED28-203ENST00000503945 PRO1854Q9UHT4 67 aa6.33□□□□□ -1.4
MED28-203ENST00000503945 Q6Q795 121 aa6.32□□□□□ -1.4
MED28-203ENST00000503945 A0A1B0GX51 115 aa6.31□□□□□ -1.4
MED28-203ENST00000503945 H3BMG7 143 aa6.31□□□□□ -1.4
MED28-203ENST00000503945 M0R2T5 61 aa6.31□□□□□ -1.4
MED28-203ENST00000503945 FABP2P12104 132 aa6.31□□□□□ -1.4
MED28-203ENST00000503945 FAM218AQ96MZ4 157 aa6.31□□□□□ -1.4
MED28-203ENST00000503945 Q96NJ1 140 aa6.31□□□□□ -1.4
MED28-203ENST00000503945 C2orf91Q6ZV80 131 aa6.3□□□□□ -1.4
MED28-203ENST00000503945 Q75L30 129 aa6.3□□□□□ -1.4
MED28-203ENST00000503945 A0A087WSZ3 146 aa6.27□□□□□ -1.41
MED28-203ENST00000503945 FLGP20930 4061 aaPredicted RBP6.26□□□□□ -1.41
MED28-203ENST00000503945 H3BQ85 93 aa6.26□□□□□ -1.41
MED28-203ENST00000503945 COX6CP09669 75 aa6.25□□□□□ -1.41
MED28-203ENST00000503945 PSMB2P49721 201 aa6.25□□□□□ -1.41
MED28-203ENST00000503945 FXYD2P54710 66 aa6.25□□□□□ -1.41
MED28-203ENST00000503945 ANKRD29Q8N6D5 301 aa6.25□□□□□ -1.41
MED28-203ENST00000503945 TRIAP1O43715 76 aa6.24□□□□□ -1.41
MED28-203ENST00000503945 DNAL4O96015 105 aa6.24□□□□□ -1.41
MED28-203ENST00000503945 TMEM256-PLSCR3K7ERE1 68 aa6.23□□□□□ -1.41
MED28-203ENST00000503945 ORMDL1Q9P0S3 153 aa6.23□□□□□ -1.41
MED28-203ENST00000503945 LOC100996750A0A140TA64 210 aa6.22□□□□□ -1.41
MED28-203ENST00000503945 KRTAP4-6Q9BYQ5 205 aa6.22□□□□□ -1.41
MED28-203ENST00000503945 A0A1W2PNM2 257 aa6.21□□□□□ -1.42
MED28-203ENST00000503945 HSD52Q0P140 79 aa6.21□□□□□ -1.42
MED28-203ENST00000503945 C20orf166-AS1Q96NR2 134 aa6.21□□□□□ -1.42
MED28-203ENST00000503945 TRBV7-4A0A0J9YYF1 115 aa6.2□□□□□ -1.42
MED28-203ENST00000503945 A8MUU9 505 aa6.2□□□□□ -1.42
MED28-203ENST00000503945 TRBV20-1A0A075B6N2 111 aa6.19□□□□□ -1.42
MED28-203ENST00000503945 LINC00313P59037 77 aa6.19□□□□□ -1.42
MED28-203ENST00000503945 PYY3Q5JQD4 70 aa6.19□□□□□ -1.42
MED28-203ENST00000503945 IGKV4-1P06312 121 aa6.18□□□□□ -1.42
MED28-203ENST00000503945 SCGB1C2P0DMR2 95 aa6.18□□□□□ -1.42
MED28-203ENST00000503945 DSCR10P59022 87 aa6.18□□□□□ -1.42
MED28-203ENST00000503945 A0A1B0GV72 72 aa6.17□□□□□ -1.42
MED28-203ENST00000503945 K7ERJ3 54 aa6.17□□□□□ -1.42
MED28-203ENST00000503945 SIGMAR1Q99720 223 aa6.17□□□□□ -1.42
MED28-203ENST00000503945 UQCR10Q9UDW1 63 aa6.16□□□□□ -1.42
MED28-203ENST00000503945 CCKP06307 115 aa6.15□□□□□ -1.42
MED28-203ENST00000503945 UBE2V1Q13404 147 aa6.15□□□□□ -1.42
MED28-203ENST00000503945 TRACP01848 142 aa6.14□□□□□ -1.43
MED28-203ENST00000503945 RBM3P98179 157 aaKnown RBP6.13□□□□□ -1.43
MED28-203ENST00000503945 DEFB116Q30KQ4 102 aa6.13□□□□□ -1.43
MED28-203ENST00000503945 LINC00472Q9H8W2 130 aa6.13□□□□□ -1.43
MED28-203ENST00000503945 KRTAP9-7A8MTY7 169 aa6.12□□□□□ -1.43
MED28-203ENST00000503945 USH2AO75445 5202 aa6.12□□□□□ -1.43
MED28-203ENST00000503945 DSCR8Q96T75 97 aa6.12□□□□□ -1.43
MED28-203ENST00000503945 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.11□□□□□ -1.43
MED28-203ENST00000503945 VPS25Q9BRG1 176 aa6.11□□□□□ -1.43
MED28-203ENST00000503945 SSPOA2VEC9 5147 aa6.1□□□□□ -1.43
MED28-203ENST00000503945 IGHV6-1A0A0B4J1U7 121 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms