RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 PLAC8Q9NZF1 115 aa3.03□□□□□ -1.92
NDFIP1-202ENST00000503388 LINC00304Q8N9R0 145 aa3.02□□□□□ -1.93
NDFIP1-202ENST00000503388 DYNC1H1Q14204 4646 aaKnown RBP3.02□□□□□ -1.93
NDFIP1-202ENST00000503388 FRYQ5TBA9 3013 aa3.02□□□□□ -1.93
NDFIP1-202ENST00000503388 DCHS1Q96JQ0 3298 aa3.02□□□□□ -1.93
NDFIP1-202ENST00000503388 DNAH10Q8IVF4 4471 aa3.02□□□□□ -1.93
NDFIP1-202ENST00000503388 PRB2P02812 416 aaPredicted RBP3.02□□□□□ -1.93
NDFIP1-202ENST00000503388 ASB16-AS1Q495Z4 193 aa3.02□□□□□ -1.93
NDFIP1-202ENST00000503388 IGKV2D-30A0A075B6S6 120 aa3.01□□□□□ -1.93
NDFIP1-202ENST00000503388 IGKV2-30P06310 120 aa3.01□□□□□ -1.93
NDFIP1-202ENST00000503388 RANBP2P49792 3224 aaKnown RBP3.01□□□□□ -1.93
NDFIP1-202ENST00000503388 ZFYVE26Q68DK2 2539 aa3.01□□□□□ -1.93
NDFIP1-202ENST00000503388 SPACA4Q8TDM5 124 aa3.01□□□□□ -1.93
NDFIP1-202ENST00000503388 CDC42SE1Q9NRR8 79 aa3□□□□□ -1.93
NDFIP1-202ENST00000503388 PSORS1C2Q9UIG4 136 aa3□□□□□ -1.93
NDFIP1-202ENST00000503388 DEFB116Q30KQ4 102 aa3□□□□□ -1.93
NDFIP1-202ENST00000503388 CFAP46Q8IYW2 2715 aa3□□□□□ -1.93
NDFIP1-202ENST00000503388 KRTAP26-1Q6PEX3 210 aa3□□□□□ -1.93
NDFIP1-202ENST00000503388 FAM168BA1KXE4 195 aa2.99□□□□□ -1.93
NDFIP1-202ENST00000503388 DSCR10P59022 87 aa2.99□□□□□ -1.93
NDFIP1-202ENST00000503388 C4orf26Q17RF5 130 aa2.99□□□□□ -1.93
NDFIP1-202ENST00000503388 RPS29P62273 56 aaKnown RBP2.99□□□□□ -1.93
NDFIP1-202ENST00000503388 TNP2Q05952 138 aa2.99□□□□□ -1.93
NDFIP1-202ENST00000503388 A0A1W2PNN7 141 aa2.98□□□□□ -1.93
NDFIP1-202ENST00000503388 LINC00483Q53H64 154 aa2.98□□□□□ -1.93
NDFIP1-202ENST00000503388 Q75L30 129 aa2.98□□□□□ -1.93
NDFIP1-202ENST00000503388 MYO15AQ9UKN7 3530 aa2.98□□□□□ -1.93
NDFIP1-202ENST00000503388 CHTF8P0CG12 524 aa2.98□□□□□ -1.93
NDFIP1-202ENST00000503388 LINC01558Q9Y6Z2 57 aa2.98□□□□□ -1.93
NDFIP1-202ENST00000503388 SPTBN4Q9H254 2564 aa2.98□□□□□ -1.93
NDFIP1-202ENST00000503388 Q96NJ1 140 aa2.98□□□□□ -1.93
NDFIP1-202ENST00000503388 C5orf42Q9H799 3197 aa2.98□□□□□ -1.93
NDFIP1-202ENST00000503388 KTN1-AS1Q86SY8 53 aa2.97□□□□□ -1.93
NDFIP1-202ENST00000503388 RBM12B-AS1Q9P1G2 102 aa2.97□□□□□ -1.93
NDFIP1-202ENST00000503388 MIR22HGQ0VDD5 57 aa2.97□□□□□ -1.93
NDFIP1-202ENST00000503388 LINC00472Q9H8W2 130 aa2.97□□□□□ -1.93
NDFIP1-202ENST00000503388 LCA10Q71F78 164 aa2.96□□□□□ -1.94
NDFIP1-202ENST00000503388 EYSQ5T1H1 3165 aa2.96□□□□□ -1.94
NDFIP1-202ENST00000503388 WDR87Q6ZQQ6 2873 aa2.96□□□□□ -1.94
NDFIP1-202ENST00000503388 MMP24-AS1A0A0U1RRL7 71 aa2.96□□□□□ -1.94
NDFIP1-202ENST00000503388 KRTAP4-16G5E9R7 235 aaPredicted RBP2.96□□□□□ -1.94
NDFIP1-202ENST00000503388 A0A087X002 238 aa2.95□□□□□ -1.94
NDFIP1-202ENST00000503388 Q5XG85 94 aa2.95□□□□□ -1.94
NDFIP1-202ENST00000503388 F8P00451 2351 aa2.95□□□□□ -1.94
NDFIP1-202ENST00000503388 SPEGQ15772 3267 aa2.95□□□□□ -1.94
NDFIP1-202ENST00000503388 KRTAP4-8Q9BYQ9 185 aa2.95□□□□□ -1.94
NDFIP1-202ENST00000503388 DNAH14Q0VDD8 3507 aa2.95□□□□□ -1.94
NDFIP1-202ENST00000503388 FRYLO94915 3013 aa2.95□□□□□ -1.94
NDFIP1-202ENST00000503388 CDH23Q9H251 3354 aa2.95□□□□□ -1.94
NDFIP1-202ENST00000503388 JMJD1CQ15652 2540 aa2.95□□□□□ -1.94
NDFIP1-202ENST00000503388 MTORP42345 2549 aa2.94□□□□□ -1.94
NDFIP1-202ENST00000503388 CHD8Q9HCK8 2581 aa2.94□□□□□ -1.94
NDFIP1-202ENST00000503388 TENM4Q6N022 2769 aa2.94□□□□□ -1.94
NDFIP1-202ENST00000503388 XP32Q5T750 250 aa2.94□□□□□ -1.94
NDFIP1-202ENST00000503388 Q6ZR54 194 aa2.94□□□□□ -1.94
NDFIP1-202ENST00000503388 LCE6AA0A183 80 aa2.93□□□□□ -1.94
NDFIP1-202ENST00000503388 RYR1P21817 5038 aa2.93□□□□□ -1.94
NDFIP1-202ENST00000503388 FP248Q71RG6 208 aaPredicted RBP2.93□□□□□ -1.94
NDFIP1-202ENST00000503388 RYR2Q92736 4967 aa2.93□□□□□ -1.94
NDFIP1-202ENST00000503388 USP24Q9UPU5 2620 aa2.93□□□□□ -1.94
NDFIP1-202ENST00000503388 LRP1BQ9NZR2 4599 aa2.92□□□□□ -1.94
NDFIP1-202ENST00000503388 LAMA3Q16787 3333 aa2.92□□□□□ -1.94
NDFIP1-202ENST00000503388 DNAH5Q8TE73 4624 aa2.92□□□□□ -1.94
NDFIP1-202ENST00000503388 AKAP13Q12802 2813 aa2.92□□□□□ -1.94
NDFIP1-202ENST00000503388 RYR3Q15413 4870 aa2.91□□□□□ -1.94
NDFIP1-202ENST00000503388 FLGP20930 4061 aaPredicted RBP2.91□□□□□ -1.94
NDFIP1-202ENST00000503388 RELNP78509 3460 aa2.91□□□□□ -1.94
NDFIP1-202ENST00000503388 ZCCHC13Q8WW36 166 aaKnown RBP2.91□□□□□ -1.94
NDFIP1-202ENST00000503388 Q8N9P0 234 aaPredicted RBP2.91□□□□□ -1.94
NDFIP1-202ENST00000503388 APOBP04114 4563 aaKnown RBP2.9□□□□□ -1.94
NDFIP1-202ENST00000503388 COL6A3P12111 3177 aa2.9□□□□□ -1.94
NDFIP1-202ENST00000503388 KRTAP29-1A8MX34 341 aaPredicted RBP2.9□□□□□ -1.94
NDFIP1-202ENST00000503388 CASC10Q5T4H9 136 aa2.9□□□□□ -1.94
NDFIP1-202ENST00000503388 CUBNO60494 3623 aa2.9□□□□□ -1.95
NDFIP1-202ENST00000503388 CRIPTQ9P021 101 aa2.9□□□□□ -1.95
NDFIP1-202ENST00000503388 KMT2CQ8NEZ4 4911 aaKnown RBP2.9□□□□□ -1.95
NDFIP1-202ENST00000503388 ATMQ13315 3056 aa2.9□□□□□ -1.95
NDFIP1-202ENST00000503388 DMAC1Q96GE9 116 aa2.9□□□□□ -1.95
NDFIP1-202ENST00000503388 DMXL2Q8TDJ6 3036 aa2.89□□□□□ -1.95
NDFIP1-202ENST00000503388 STARD9Q9P2P6 4700 aa2.89□□□□□ -1.95
NDFIP1-202ENST00000503388 CSMD3Q7Z407 3707 aa2.89□□□□□ -1.95
NDFIP1-202ENST00000503388 ACANP16112 2415 aa2.89□□□□□ -1.95
NDFIP1-202ENST00000503388 Q8NDZ9 215 aa2.88□□□□□ -1.95
NDFIP1-202ENST00000503388 HRES1P13985 223 aa2.88□□□□□ -1.95
NDFIP1-202ENST00000503388 IGSF10Q6WRI0 2623 aa2.87□□□□□ -1.95
NDFIP1-202ENST00000503388 TRIOO75962 3097 aa2.87□□□□□ -1.95
NDFIP1-202ENST00000503388 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.87□□□□□ -1.95
NDFIP1-202ENST00000503388 SETD2Q9BYW2 2564 aaPredicted RBP2.87□□□□□ -1.95
NDFIP1-202ENST00000503388 CFAP54Q96N23 3096 aa2.87□□□□□ -1.95
NDFIP1-202ENST00000503388 DMXL1Q9Y485 3027 aa2.86□□□□□ -1.95
NDFIP1-202ENST00000503388 ASH1LQ9NR48 2969 aaKnown RBP2.86□□□□□ -1.95
NDFIP1-202ENST00000503388 LAMA2P24043 3122 aaKnown RBP2.86□□□□□ -1.95
NDFIP1-202ENST00000503388 POLQO75417 2590 aa2.86□□□□□ -1.95
NDFIP1-202ENST00000503388 FASNP49327 2511 aaKnown RBP2.85□□□□□ -1.95
NDFIP1-202ENST00000503388 A0A1B0GU33 70 aa2.85□□□□□ -1.95
NDFIP1-202ENST00000503388 Q5W150 140 aa2.85□□□□□ -1.95
NDFIP1-202ENST00000503388 EPG5Q9HCE0 2579 aa2.85□□□□□ -1.95
NDFIP1-202ENST00000503388 LORP23490 312 aaPredicted RBP2.85□□□□□ -1.95
NDFIP1-202ENST00000503388 FLNAP21333 2647 aaKnown RBP2.85□□□□□ -1.95
NDFIP1-202ENST00000503388 FBN2P35556 2912 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms