RNA–Protein interactions for RNA: ENST00000503341.1

ARHGEF28-205, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2

Gene ARHGEF28, Length 1,926 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-205ENST00000503341 Q8NBF4 154 aa11.68□□□□□ -0.54
ARHGEF28-205ENST00000503341 FAM30AQ9NZY2 134 aa11.68□□□□□ -0.54
ARHGEF28-205ENST00000503341 FAM236AA0A1B0GUQ0 79 aa11.67□□□□□ -0.54
ARHGEF28-205ENST00000503341 FAM236BA0A1B0GV22 79 aa11.67□□□□□ -0.54
ARHGEF28-205ENST00000503341 A0A1B0GW54 56 aa11.67□□□□□ -0.54
ARHGEF28-205ENST00000503341 HAMPP81172 84 aa11.67□□□□□ -0.54
ARHGEF28-205ENST00000503341 ANAPC13Q9BS18 74 aa11.66□□□□□ -0.54
ARHGEF28-205ENST00000503341 SPRR4Q96PI1 79 aa11.65□□□□□ -0.54
ARHGEF28-205ENST00000503341 IGFL1Q6UW32 110 aa11.64□□□□□ -0.55
ARHGEF28-205ENST00000503341 FRAS1Q86XX4 4008 aa11.64□□□□□ -0.55
ARHGEF28-205ENST00000503341 DNAH11Q96DT5 4516 aa11.63□□□□□ -0.55
ARHGEF28-205ENST00000503341 A0A087WVE0 104 aa11.63□□□□□ -0.55
ARHGEF28-205ENST00000503341 HIST1H4AP62805 103 aaKnown RBP11.63□□□□□ -0.55
ARHGEF28-205ENST00000503341 CXCL6P80162 114 aa11.63□□□□□ -0.55
ARHGEF28-205ENST00000503341 CIRBP-AS1Q8TBR5 109 aa11.63□□□□□ -0.55
ARHGEF28-205ENST00000503341 KRTAP10-1P60331 282 aa11.62□□□□□ -0.55
ARHGEF28-205ENST00000503341 A0A0G2JQZ4 141 aa11.62□□□□□ -0.55
ARHGEF28-205ENST00000503341 NREPQ16612 68 aa11.62□□□□□ -0.55
ARHGEF28-205ENST00000503341 Q6ZSA8 131 aa11.62□□□□□ -0.55
ARHGEF28-205ENST00000503341 DNAH5Q8TE73 4624 aa11.61□□□□□ -0.55
ARHGEF28-205ENST00000503341 LCE6AA0A183 80 aa11.6□□□□□ -0.55
ARHGEF28-205ENST00000503341 ZNF861PO60384 105 aa11.6□□□□□ -0.55
ARHGEF28-205ENST00000503341 CRYGAP11844 174 aa11.6□□□□□ -0.55
ARHGEF28-205ENST00000503341 DNAH8Q96JB1 4490 aa11.6□□□□□ -0.55
ARHGEF28-205ENST00000503341 SCXQ7RTU7 201 aa11.58□□□□□ -0.56
ARHGEF28-205ENST00000503341 LINC00483Q53H64 154 aa11.57□□□□□ -0.56
ARHGEF28-205ENST00000503341 FAT2Q9NYQ8 4349 aa11.57□□□□□ -0.56
ARHGEF28-205ENST00000503341 ZNF706Q9Y5V0 76 aaPredicted RBP11.56□□□□□ -0.56
ARHGEF28-205ENST00000503341 IGLV7-43P04211 117 aa11.55□□□□□ -0.56
ARHGEF28-205ENST00000503341 SACSQ9NZJ4 4579 aa11.53□□□□□ -0.56
ARHGEF28-205ENST00000503341 PKD1P98161 4303 aa11.52□□□□□ -0.57
ARHGEF28-205ENST00000503341 BPY2O14599 106 aa11.51□□□□□ -0.57
ARHGEF28-205ENST00000503341 SRRM2Q9UQ35 2752 aaKnown RBP11.51□□□□□ -0.57
ARHGEF28-205ENST00000503341 ATOX1O00244 68 aa11.5□□□□□ -0.57
ARHGEF28-205ENST00000503341 LINC00336Q6ZUF6 198 aa11.49□□□□□ -0.57
ARHGEF28-205ENST00000503341 A0A087WSZ3 146 aa11.48□□□□□ -0.57
ARHGEF28-205ENST00000503341 IGLV9-49A0A0B4J1Y8 123 aa11.47□□□□□ -0.57
ARHGEF28-205ENST00000503341 C9orf153Q5TBE3 101 aa11.45□□□□□ -0.58
ARHGEF28-205ENST00000503341 Q8N9L7 120 aa11.45□□□□□ -0.58
ARHGEF28-205ENST00000503341 ANAPC11Q9NYG5 84 aa11.45□□□□□ -0.58
ARHGEF28-205ENST00000503341 IGKV4-1P06312 121 aa11.45□□□□□ -0.58
ARHGEF28-205ENST00000503341 CCDC179H3BU77 68 aa11.44□□□□□ -0.58
ARHGEF28-205ENST00000503341 RPL37AP61513 92 aaKnown RBP11.44□□□□□ -0.58
ARHGEF28-205ENST00000503341 DSCR10P59022 87 aa11.41□□□□□ -0.58
ARHGEF28-205ENST00000503341 A0A1B0GVY2 172 aa11.39□□□□□ -0.59
ARHGEF28-205ENST00000503341 MOBPQ13875 183 aa11.39□□□□□ -0.59
ARHGEF28-205ENST00000503341 COX7CP15954 63 aa11.38□□□□□ -0.59
ARHGEF28-205ENST00000503341 SERP2Q8N6R1 65 aa11.37□□□□□ -0.59
ARHGEF28-205ENST00000503341 UQCRQO14949 82 aa11.37□□□□□ -0.59
ARHGEF28-205ENST00000503341 DEFB116Q30KQ4 102 aa11.35□□□□□ -0.59
ARHGEF28-205ENST00000503341 LRP1BQ9NZR2 4599 aa11.35□□□□□ -0.59
ARHGEF28-205ENST00000503341 LINC00472Q9H8W2 130 aa11.33□□□□□ -0.6
ARHGEF28-205ENST00000503341 K7EQZ3 153 aa11.33□□□□□ -0.6
ARHGEF28-205ENST00000503341 HRCT1Q6UXD1 115 aa11.31□□□□□ -0.6
ARHGEF28-205ENST00000503341 RYR2Q92736 4967 aa11.31□□□□□ -0.6
ARHGEF28-205ENST00000503341 SMIM20Q8N5G0 67 aa11.29□□□□□ -0.6
ARHGEF28-205ENST00000503341 TRAV7A0A075B6U4 112 aa11.27□□□□□ -0.61
ARHGEF28-205ENST00000503341 SSBP3-AS1Q7Z2R9 100 aa11.26□□□□□ -0.61
ARHGEF28-205ENST00000503341 SS18L2Q9UHA2 77 aa11.25□□□□□ -0.61
ARHGEF28-205ENST00000503341 Q96NJ1 140 aa11.24□□□□□ -0.61
ARHGEF28-205ENST00000503341 A0A087X002 238 aa11.23□□□□□ -0.61
ARHGEF28-205ENST00000503341 FAM229BQ4G0N7 80 aa11.23□□□□□ -0.61
ARHGEF28-205ENST00000503341 DYNC1H1Q14204 4646 aaKnown RBP11.22□□□□□ -0.61
ARHGEF28-205ENST00000503341 A8MWP4 228 aa11.22□□□□□ -0.61
ARHGEF28-205ENST00000503341 J3KT08 172 aa11.22□□□□□ -0.61
ARHGEF28-205ENST00000503341 KRTAP1-4P0C5Y4 121 aa11.22□□□□□ -0.61
ARHGEF28-205ENST00000503341 PKHD1P08F94 4074 aa11.21□□□□□ -0.62
ARHGEF28-205ENST00000503341 CD164Q04900 197 aa11.21□□□□□ -0.62
ARHGEF28-205ENST00000503341 KRTAP13-2Q52LG2 175 aa11.21□□□□□ -0.62
ARHGEF28-205ENST00000503341 HCG22E2RYF7 251 aa11.2□□□□□ -0.62
ARHGEF28-205ENST00000503341 PRR15Q8IV56 129 aa11.2□□□□□ -0.62
ARHGEF28-205ENST00000503341 KMT2CQ8NEZ4 4911 aaKnown RBP11.19□□□□□ -0.62
ARHGEF28-205ENST00000503341 OCR1Q9BZK8 76 aa11.19□□□□□ -0.62
ARHGEF28-205ENST00000503341 SMR3BP02814 79 aaPredicted RBP11.17□□□□□ -0.62
ARHGEF28-205ENST00000503341 SPINK6Q6UWN8 80 aa11.15□□□□□ -0.62
ARHGEF28-205ENST00000503341 CYSTM1Q9H1C7 97 aa11.15□□□□□ -0.62
ARHGEF28-205ENST00000503341 C20orf197Q8N268 126 aa11.13□□□□□ -0.63
ARHGEF28-205ENST00000503341 VPS13BQ7Z7G8 4022 aa11.13□□□□□ -0.63
ARHGEF28-205ENST00000503341 WFDC13Q8IUB5 93 aa11.13□□□□□ -0.63
ARHGEF28-205ENST00000503341 KRTAP29-1A8MX34 341 aaPredicted RBP11.12□□□□□ -0.63
ARHGEF28-205ENST00000503341 NDUFB1O75438 58 aa11.12□□□□□ -0.63
ARHGEF28-205ENST00000503341 PLA2G1BP04054 148 aaKnown RBP11.11□□□□□ -0.63
ARHGEF28-205ENST00000503341 KRTAP10-4P60372 401 aaPredicted RBP11.08□□□□□ -0.64
ARHGEF28-205ENST00000503341 CASC2Q6XLA1 102 aa11.08□□□□□ -0.64
ARHGEF28-205ENST00000503341 APOBP04114 4563 aaKnown RBP11.07□□□□□ -0.64
ARHGEF28-205ENST00000503341 ASB16-AS1Q495Z4 193 aa11.07□□□□□ -0.64
ARHGEF28-205ENST00000503341 MMP24-AS1A0A0U1RRL7 71 aa11.06□□□□□ -0.64
ARHGEF28-205ENST00000503341 KLKP1Q107X0 134 aa11.06□□□□□ -0.64
ARHGEF28-205ENST00000503341 A0A1B0GVX0 72 aa11.04□□□□□ -0.64
ARHGEF28-205ENST00000503341 CDK2AP2O75956 126 aa11.04□□□□□ -0.64
ARHGEF28-205ENST00000503341 Q5XG85 94 aa11.03□□□□□ -0.64
ARHGEF28-205ENST00000503341 SNURFQ9Y675 71 aa11.03□□□□□ -0.64
ARHGEF28-205ENST00000503341 TYMSOSQ8TAI1 123 aa11.03□□□□□ -0.64
ARHGEF28-205ENST00000503341 TMEM254Q8TBM7 123 aa11.03□□□□□ -0.64
ARHGEF28-205ENST00000503341 C8orf17Q9NRJ1 99 aa11.01□□□□□ -0.65
ARHGEF28-205ENST00000503341 IGHV6-1A0A0B4J1U7 121 aa11.01□□□□□ -0.65
ARHGEF28-205ENST00000503341 hDV103S1A0JD37 113 aa11□□□□□ -0.65
ARHGEF28-205ENST00000503341 A0A0U1RQV1 116 aa10.98□□□□□ -0.65
ARHGEF28-205ENST00000503341 PRR26Q8N8Z3 221 aa10.98□□□□□ -0.65
ARHGEF28-205ENST00000503341 TMEM258P61165 79 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms