RNA–Protein interactions for RNA: ENST00000502479.1

LINC00939-201, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best) BASIC

Gene LINC00939, Length 4,972 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-201ENST00000502479 SMIM29Q86T20 159 aa4.12□□□□□ -1.75
LINC00939-201ENST00000502479 LINC01554Q52M75 96 aa4.12□□□□□ -1.75
LINC00939-201ENST00000502479 CYP4F30PQ9H0H9 118 aa4.12□□□□□ -1.75
LINC00939-201ENST00000502479 EPG5Q9HCE0 2579 aa4.11□□□□□ -1.75
LINC00939-201ENST00000502479 LUZP6Q538Z0 58 aa4.11□□□□□ -1.75
LINC00939-201ENST00000502479 UQCR11O14957 56 aa4.11□□□□□ -1.75
LINC00939-201ENST00000502479 C9orf163Q8N9P6 203 aa4.11□□□□□ -1.75
LINC00939-201ENST00000502479 NAV2Q8IVL1 2488 aa4.11□□□□□ -1.75
LINC00939-201ENST00000502479 EPM2AB3EWF7 344 aa4.11□□□□□ -1.75
LINC00939-201ENST00000502479 H7BZZ5 65 aa4.1□□□□□ -1.75
LINC00939-201ENST00000502479 IGFL1Q6UW32 110 aa4.1□□□□□ -1.75
LINC00939-201ENST00000502479 ST20-AS1Q8NBB2 130 aa4.1□□□□□ -1.75
LINC00939-201ENST00000502479 ACANP16112 2415 aa4.1□□□□□ -1.75
LINC00939-201ENST00000502479 A8MWP4 228 aa4.1□□□□□ -1.75
LINC00939-201ENST00000502479 LY6G6CO95867 125 aa4.1□□□□□ -1.75
LINC00939-201ENST00000502479 A0A1W2PNM2 257 aa4.09□□□□□ -1.75
LINC00939-201ENST00000502479 LCA10Q71F78 164 aa4.09□□□□□ -1.75
LINC00939-201ENST00000502479 MOBPQ13875 183 aa4.09□□□□□ -1.75
LINC00939-201ENST00000502479 OCR1Q9BZK8 76 aa4.09□□□□□ -1.75
LINC00939-201ENST00000502479 CENPEQ02224 2701 aa4.09□□□□□ -1.75
LINC00939-201ENST00000502479 TRAV22A0A0B4J277 110 aa4.09□□□□□ -1.76
LINC00939-201ENST00000502479 PRKDCP78527 4128 aaKnown RBP4.08□□□□□ -1.76
LINC00939-201ENST00000502479 A8MUN3 132 aa4.07□□□□□ -1.76
LINC00939-201ENST00000502479 PHF5AQ7RTV0 110 aaKnown RBP4.07□□□□□ -1.76
LINC00939-201ENST00000502479 LYSTQ99698 3801 aa4.07□□□□□ -1.76
LINC00939-201ENST00000502479 TEX15Q9BXT5 2789 aa4.07□□□□□ -1.76
LINC00939-201ENST00000502479 CASC10Q5T4H9 136 aa4.07□□□□□ -1.76
LINC00939-201ENST00000502479 IGLV5-52A0A0A0MRZ9 124 aa4.07□□□□□ -1.76
LINC00939-201ENST00000502479 C1orf134Q5TEV5 83 aa4.07□□□□□ -1.76
LINC00939-201ENST00000502479 CHD6Q8TD26 2715 aa4.07□□□□□ -1.76
LINC00939-201ENST00000502479 ANKRD17O75179 2603 aaKnown RBP4.06□□□□□ -1.76
LINC00939-201ENST00000502479 SPANXA2-OT1Q8N9U9 137 aa4.06□□□□□ -1.76
LINC00939-201ENST00000502479 A0A1W2PNN7 141 aa4.06□□□□□ -1.76
LINC00939-201ENST00000502479 RTL8CO15255 209 aa4.06□□□□□ -1.76
LINC00939-201ENST00000502479 LCE6AA0A183 80 aa4.06□□□□□ -1.76
LINC00939-201ENST00000502479 LINC00483Q53H64 154 aa4.06□□□□□ -1.76
LINC00939-201ENST00000502479 KTN1-AS1Q86SY8 53 aa4.06□□□□□ -1.76
LINC00939-201ENST00000502479 LOC101927531A0A1B0GV80 90 aa4.05□□□□□ -1.76
LINC00939-201ENST00000502479 K7EQZ3 153 aa4.05□□□□□ -1.76
LINC00939-201ENST00000502479 SPACA4Q8TDM5 124 aa4.05□□□□□ -1.76
LINC00939-201ENST00000502479 PRR15Q8IV56 129 aa4.05□□□□□ -1.76
LINC00939-201ENST00000502479 JMJD1CQ15652 2540 aa4.05□□□□□ -1.76
LINC00939-201ENST00000502479 MIR22HGQ0VDD5 57 aa4.04□□□□□ -1.76
LINC00939-201ENST00000502479 NIPBLQ6KC79 2804 aaeCLIP4.04□□□□□ -1.76
LINC00939-201ENST00000502479 GCN1Q92616 2671 aaKnown RBP4.04□□□□□ -1.76
LINC00939-201ENST00000502479 DSCR10P59022 87 aa4.04□□□□□ -1.76
LINC00939-201ENST00000502479 CSMD3Q7Z407 3707 aa4.04□□□□□ -1.76
LINC00939-201ENST00000502479 A0A087WTM6 91 aa4.03□□□□□ -1.76
LINC00939-201ENST00000502479 ITPR3Q14573 2671 aa4.03□□□□□ -1.76
LINC00939-201ENST00000502479 COA5Q86WW8 74 aa4.02□□□□□ -1.77
LINC00939-201ENST00000502479 PLAC8Q9NZF1 115 aa4.02□□□□□ -1.77
LINC00939-201ENST00000502479 HUWE1Q7Z6Z7 4374 aaKnown RBP4.02□□□□□ -1.77
LINC00939-201ENST00000502479 FAM229AH3BQW9 127 aa4.01□□□□□ -1.77
LINC00939-201ENST00000502479 DNAH6Q9C0G6 4158 aa4.01□□□□□ -1.77
LINC00939-201ENST00000502479 ITPR2Q14571 2701 aa4.01□□□□□ -1.77
LINC00939-201ENST00000502479 ZNF861PO60384 105 aa4.01□□□□□ -1.77
LINC00939-201ENST00000502479 LINC00313P59037 77 aa4.01□□□□□ -1.77
LINC00939-201ENST00000502479 KRTAP7-1Q8IUC3 87 aa4.01□□□□□ -1.77
LINC00939-201ENST00000502479 USP9YO00507 2555 aaPredicted RBP4.01□□□□□ -1.77
LINC00939-201ENST00000502479 CDC42SE1Q9NRR8 79 aa4.01□□□□□ -1.77
LINC00939-201ENST00000502479 A0A0A0MQY5 61 aa4□□□□□ -1.77
LINC00939-201ENST00000502479 LINC00336Q6ZUF6 198 aa4□□□□□ -1.77
LINC00939-201ENST00000502479 NF1P21359 2839 aa4□□□□□ -1.77
LINC00939-201ENST00000502479 MTORP42345 2549 aa3.99□□□□□ -1.77
LINC00939-201ENST00000502479 DNAH9Q9NYC9 4486 aa3.99□□□□□ -1.77
LINC00939-201ENST00000502479 LRRK2Q5S007 2527 aa3.99□□□□□ -1.77
LINC00939-201ENST00000502479 A0A1B0GVX0 72 aa3.99□□□□□ -1.77
LINC00939-201ENST00000502479 Q1T7F1 81 aa3.99□□□□□ -1.77
LINC00939-201ENST00000502479 CYSTM1Q9H1C7 97 aa3.99□□□□□ -1.77
LINC00939-201ENST00000502479 Q5XG85 94 aa3.99□□□□□ -1.77
LINC00939-201ENST00000502479 LINC00472Q9H8W2 130 aa3.99□□□□□ -1.77
LINC00939-201ENST00000502479 SETD2Q9BYW2 2564 aaPredicted RBP3.98□□□□□ -1.77
LINC00939-201ENST00000502479 CHTF8P0CG12 524 aa3.98□□□□□ -1.77
LINC00939-201ENST00000502479 KRTAP13-1Q8IUC0 172 aa3.98□□□□□ -1.77
LINC00939-201ENST00000502479 KRTAP1-5Q9BYS1 174 aa3.98□□□□□ -1.77
LINC00939-201ENST00000502479 C8orf17Q9NRJ1 99 aa3.98□□□□□ -1.77
LINC00939-201ENST00000502479 UNC79Q9P2D8 2635 aa3.98□□□□□ -1.77
LINC00939-201ENST00000502479 Q6ZRN7 208 aaPredicted RBP3.98□□□□□ -1.77
LINC00939-201ENST00000502479 VWFP04275 2813 aa3.98□□□□□ -1.77
LINC00939-201ENST00000502479 WWC2-AS2Q96NR7 200 aa3.97□□□□□ -1.77
LINC00939-201ENST00000502479 ZCCHC13Q8WW36 166 aaKnown RBP3.97□□□□□ -1.77
LINC00939-201ENST00000502479 MRPL34Q9BQ48 92 aaKnown RBP3.97□□□□□ -1.77
LINC00939-201ENST00000502479 MAP1AP78559 2803 aaPredicted RBP3.97□□□□□ -1.77
LINC00939-201ENST00000502479 POLQO75417 2590 aa3.97□□□□□ -1.77
LINC00939-201ENST00000502479 FLG2Q5D862 2391 aaPredicted RBP3.97□□□□□ -1.77
LINC00939-201ENST00000502479 FRAS1Q86XX4 4008 aa3.97□□□□□ -1.77
LINC00939-201ENST00000502479 H3BS24 57 aa3.97□□□□□ -1.77
LINC00939-201ENST00000502479 IGLV7-43P04211 117 aa3.97□□□□□ -1.77
LINC00939-201ENST00000502479 SETXQ7Z333 2677 aaKnown RBP3.97□□□□□ -1.77
LINC00939-201ENST00000502479 FAM229BQ4G0N7 80 aa3.96□□□□□ -1.78
LINC00939-201ENST00000502479 FASNP49327 2511 aaKnown RBP3.95□□□□□ -1.78
LINC00939-201ENST00000502479 KRTAP29-1A8MX34 341 aaPredicted RBP3.95□□□□□ -1.78
LINC00939-201ENST00000502479 ASB16-AS1Q495Z4 193 aa3.95□□□□□ -1.78
LINC00939-201ENST00000502479 ABCA12Q86UK0 2595 aa3.95□□□□□ -1.78
LINC00939-201ENST00000502479 TENM1Q9UKZ4 2725 aa3.95□□□□□ -1.78
LINC00939-201ENST00000502479 MMP24-AS1A0A0U1RRL7 71 aa3.95□□□□□ -1.78
LINC00939-201ENST00000502479 Q6ZR54 194 aa3.95□□□□□ -1.78
LINC00939-201ENST00000502479 Q96NJ1 140 aa3.95□□□□□ -1.78
LINC00939-201ENST00000502479 PSORS1C2Q9UIG4 136 aa3.94□□□□□ -1.78
LINC00939-201ENST00000502479 FBN1P35555 2871 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms