RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 MAP1BP46821 2468 aaKnown RBP1.97□□□□□ -2.09
SUB1-202ENST00000502453 KRTAP1-4P0C5Y4 121 aa1.97□□□□□ -2.09
SUB1-202ENST00000502453 DEFB110Q30KQ9 67 aa1.97□□□□□ -2.09
SUB1-202ENST00000502453 FBN1P35555 2871 aaKnown RBP1.97□□□□□ -2.09
SUB1-202ENST00000502453 F5P12259 2224 aa1.97□□□□□ -2.09
SUB1-202ENST00000502453 SPTY2D1-AS1A0A0U1RR47 76 aa1.96□□□□□ -2.1
SUB1-202ENST00000502453 DEFB103AP81534 67 aa1.96□□□□□ -2.1
SUB1-202ENST00000502453 RPL39P5Q59GN2 51 aa1.96□□□□□ -2.1
SUB1-202ENST00000502453 USMG5Q96IX5 58 aa1.96□□□□□ -2.1
SUB1-202ENST00000502453 H3BUA1 57 aa1.96□□□□□ -2.1
SUB1-202ENST00000502453 COX17Q14061 63 aa1.96□□□□□ -2.1
SUB1-202ENST00000502453 MINOS1Q5TGZ0 78 aa1.96□□□□□ -2.1
SUB1-202ENST00000502453 Q6ZRN7 208 aaPredicted RBP1.96□□□□□ -2.1
SUB1-202ENST00000502453 ETDCA0A1B0GVM5 59 aa1.96□□□□□ -2.1
SUB1-202ENST00000502453 MT3P25713 68 aa1.95□□□□□ -2.1
SUB1-202ENST00000502453 POLR2KP53803 58 aaKnown RBP1.95□□□□□ -2.1
SUB1-202ENST00000502453 IGFL1Q6UW32 110 aa1.95□□□□□ -2.1
SUB1-202ENST00000502453 ASXL3Q9C0F0 2248 aa1.95□□□□□ -2.1
SUB1-202ENST00000502453 DYNC2H1Q8NCM8 4307 aaKnown RBP1.94□□□□□ -2.1
SUB1-202ENST00000502453 K7EIM0 57 aa1.94□□□□□ -2.1
SUB1-202ENST00000502453 PRB2P02812 416 aaPredicted RBP1.94□□□□□ -2.1
SUB1-202ENST00000502453 COX7BP24311 80 aa1.94□□□□□ -2.1
SUB1-202ENST00000502453 KRTAP10-11P60412 298 aa1.94□□□□□ -2.1
SUB1-202ENST00000502453 CACNA1BQ00975 2339 aa1.94□□□□□ -2.1
SUB1-202ENST00000502453 CRIP1P50238 77 aa1.94□□□□□ -2.1
SUB1-202ENST00000502453 KRTAP9-8Q9BYQ0 159 aa1.94□□□□□ -2.1
SUB1-202ENST00000502453 CEP250Q9BV73 2442 aa1.94□□□□□ -2.1
SUB1-202ENST00000502453 INE1O15225 51 aa1.94□□□□□ -2.1
SUB1-202ENST00000502453 M0R2N4 97 aa1.93□□□□□ -2.1
SUB1-202ENST00000502453 WT1-ASQ06250 92 aa1.93□□□□□ -2.1
SUB1-202ENST00000502453 I3L2K1 104 aa1.93□□□□□ -2.1
SUB1-202ENST00000502453 PRB1P04280 392 aa1.93□□□□□ -2.1
SUB1-202ENST00000502453 KNTC1P50748 2209 aa1.93□□□□□ -2.1
SUB1-202ENST00000502453 KAAG1Q9UBP8 84 aa1.93□□□□□ -2.1
SUB1-202ENST00000502453 ZFYVE26Q68DK2 2539 aa1.93□□□□□ -2.1
SUB1-202ENST00000502453 CACNA1HO95180 2353 aa1.93□□□□□ -2.1
SUB1-202ENST00000502453 MYO18BQ8IUG5 2567 aa1.93□□□□□ -2.1
SUB1-202ENST00000502453 ZANQ9Y493 2812 aa1.92□□□□□ -2.1
SUB1-202ENST00000502453 TP53AIP1Q9HCN2 124 aa1.92□□□□□ -2.1
SUB1-202ENST00000502453 TOMM7Q9P0U1 55 aa1.92□□□□□ -2.1
SUB1-202ENST00000502453 NCOR2Q9Y618 2525 aa1.92□□□□□ -2.1
SUB1-202ENST00000502453 A0A1B0GU69 56 aa1.92□□□□□ -2.1
SUB1-202ENST00000502453 HYDINQ4G0P3 5121 aa1.92□□□□□ -2.1
SUB1-202ENST00000502453 HECTD4Q9Y4D8 3996 aa1.92□□□□□ -2.1
SUB1-202ENST00000502453 DEFB108BQ8NET1 73 aa1.92□□□□□ -2.1
SUB1-202ENST00000502453 CRCT1Q9UGL9 99 aa1.92□□□□□ -2.1
SUB1-202ENST00000502453 COL7A1Q02388 2944 aa1.92□□□□□ -2.1
SUB1-202ENST00000502453 ZDBF2Q9HCK1 2354 aa1.91□□□□□ -2.1
SUB1-202ENST00000502453 MAST4O15021 2626 aa1.91□□□□□ -2.1
SUB1-202ENST00000502453 FAM208BQ5VWN6 2430 aa1.91□□□□□ -2.1
SUB1-202ENST00000502453 KRTAP10-9P60411 292 aa1.91□□□□□ -2.1
SUB1-202ENST00000502453 LCE1FQ5T754 118 aa1.91□□□□□ -2.1
SUB1-202ENST00000502453 SMIM11BQ8TCY0 68 aa1.91□□□□□ -2.1
SUB1-202ENST00000502453 MXRA5Q9NR99 2828 aa1.91□□□□□ -2.1
SUB1-202ENST00000502453 DNAH1Q9P2D7 4330 aa1.91□□□□□ -2.1
SUB1-202ENST00000502453 PIEZO2Q9H5I5 2752 aa1.91□□□□□ -2.1
SUB1-202ENST00000502453 SACSQ9NZJ4 4579 aa1.9□□□□□ -2.1
SUB1-202ENST00000502453 MEGF8Q7Z7M0 2845 aa1.9□□□□□ -2.11
SUB1-202ENST00000502453 G3V318 75 aa1.9□□□□□ -2.11
SUB1-202ENST00000502453 M0QY20 66 aa1.9□□□□□ -2.11
SUB1-202ENST00000502453 SSBP3-AS1Q7Z2R9 100 aa1.9□□□□□ -2.11
SUB1-202ENST00000502453 RPL39LQ96EH5 51 aaKnown RBP1.9□□□□□ -2.11
SUB1-202ENST00000502453 NIPBLQ6KC79 2804 aaeCLIP1.9□□□□□ -2.11
SUB1-202ENST00000502453 PKD1L1Q8TDX9 2849 aa1.9□□□□□ -2.11
SUB1-202ENST00000502453 PCLOQ9Y6V0 5065 aa1.9□□□□□ -2.11
SUB1-202ENST00000502453 FAT3Q8TDW7 4589 aa1.9□□□□□ -2.11
SUB1-202ENST00000502453 IGF2RP11717 2491 aa1.9□□□□□ -2.11
SUB1-202ENST00000502453 DEFB133Q30KQ1 61 aa1.89□□□□□ -2.11
SUB1-202ENST00000502453 Q8IZM0 81 aa1.89□□□□□ -2.11
SUB1-202ENST00000502453 DNAH9Q9NYC9 4486 aa1.89□□□□□ -2.11
SUB1-202ENST00000502453 CADP27708 2225 aa1.89□□□□□ -2.11
SUB1-202ENST00000502453 USP9XQ93008 2570 aaPredicted RBP1.89□□□□□ -2.11
SUB1-202ENST00000502453 MAP1AP78559 2803 aaPredicted RBP1.89□□□□□ -2.11
SUB1-202ENST00000502453 RPL39P62891 51 aaKnown RBP1.88□□□□□ -2.11
SUB1-202ENST00000502453 LINC00575Q6W349 94 aa1.88□□□□□ -2.11
SUB1-202ENST00000502453 H3BUX3 64 aa1.88□□□□□ -2.11
SUB1-202ENST00000502453 CDKN2A-AS1Q9UH64 79 aa1.88□□□□□ -2.11
SUB1-202ENST00000502453 EPPK1P58107 5090 aaKnown RBP1.88□□□□□ -2.11
SUB1-202ENST00000502453 USF3Q68DE3 2245 aa1.88□□□□□ -2.11
SUB1-202ENST00000502453 BRD3OSQ6XYD6 125 aa1.88□□□□□ -2.11
SUB1-202ENST00000502453 DEFB131AP59861 70 aa1.87□□□□□ -2.11
SUB1-202ENST00000502453 PP632Q6XCG6 107 aa1.87□□□□□ -2.11
SUB1-202ENST00000502453 RYR2Q92736 4967 aa1.87□□□□□ -2.11
SUB1-202ENST00000502453 LEAP2Q969E1 77 aa1.87□□□□□ -2.11
SUB1-202ENST00000502453 CACNA1EQ15878 2313 aa1.87□□□□□ -2.11
SUB1-202ENST00000502453 AHCTF1Q8WYP5 2266 aa1.87□□□□□ -2.11
SUB1-202ENST00000502453 KLK9Q2XQG4 91 aa1.87□□□□□ -2.11
SUB1-202ENST00000502453 RHPN1-AS1Q9BWJ2 59 aa1.87□□□□□ -2.11
SUB1-202ENST00000502453 KRTAP2-2Q9BYT5 123 aa1.87□□□□□ -2.11
SUB1-202ENST00000502453 HIVEP1P15822 2718 aa1.87□□□□□ -2.11
SUB1-202ENST00000502453 Q6ZRX8 168 aa1.86□□□□□ -2.11
SUB1-202ENST00000502453 ACACBO00763 2458 aa1.86□□□□□ -2.11
SUB1-202ENST00000502453 FAM186AA6NE01 2351 aa1.86□□□□□ -2.11
SUB1-202ENST00000502453 TENM1Q9UKZ4 2725 aa1.86□□□□□ -2.11
SUB1-202ENST00000502453 DEFB131BA0A096LNP1 70 aa1.86□□□□□ -2.11
SUB1-202ENST00000502453 LY6G6CO95867 125 aa1.86□□□□□ -2.11
SUB1-202ENST00000502453 STARD9Q9P2P6 4700 aa1.86□□□□□ -2.11
SUB1-202ENST00000502453 CNTRLQ7Z7A1 2325 aa1.85□□□□□ -2.11
SUB1-202ENST00000502453 FAT2Q9NYQ8 4349 aa1.85□□□□□ -2.11
SUB1-202ENST00000502453 FLG2Q5D862 2391 aaPredicted RBP1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms