RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 AHNAKQ09666 5890 aaKnown RBP1.3□□□□□ -2.2
RIF1-212ENST00000498041 HMCN2Q8NDA2 5059 aa1.3□□□□□ -2.2
RIF1-212ENST00000498041 DYNC2H1Q8NCM8 4307 aaKnown RBP1.3□□□□□ -2.2
RIF1-212ENST00000498041 STAB2Q8WWQ8 2551 aa1.3□□□□□ -2.2
RIF1-212ENST00000498041 A0A087WTM6 91 aa1.3□□□□□ -2.2
RIF1-212ENST00000498041 A0A1W2PPM0 123 aa1.3□□□□□ -2.2
RIF1-212ENST00000498041 A6NDN8 102 aa1.3□□□□□ -2.2
RIF1-212ENST00000498041 C16orf90A8MZG2 172 aa1.3□□□□□ -2.2
RIF1-212ENST00000498041 K7EP34 96 aa1.3□□□□□ -2.2
RIF1-212ENST00000498041 P0C880 135 aa1.3□□□□□ -2.2
RIF1-212ENST00000498041 PLNP26678 52 aa1.3□□□□□ -2.2
RIF1-212ENST00000498041 HERVK_113P63121 156 aa1.3□□□□□ -2.2
RIF1-212ENST00000498041 PRLHP81277 87 aa1.3□□□□□ -2.2
RIF1-212ENST00000498041 LINC01556Q5JQF7 62 aa1.3□□□□□ -2.2
RIF1-212ENST00000498041 COL5A1-AS1Q5SY13 56 aa1.3□□□□□ -2.2
RIF1-212ENST00000498041 SDIM1Q6ZPB5 146 aa1.3□□□□□ -2.2
RIF1-212ENST00000498041 C1orf64Q8NEQ6 169 aa1.3□□□□□ -2.2
RIF1-212ENST00000498041 DEFB105AQ8NG35 78 aa1.3□□□□□ -2.2
RIF1-212ENST00000498041 MUC7Q8TAX7 377 aa1.3□□□□□ -2.2
RIF1-212ENST00000498041 SPANXDQ9BXN6 97 aa1.3□□□□□ -2.2
RIF1-212ENST00000498041 SPANXCQ9NY87 97 aa1.3□□□□□ -2.2
RIF1-212ENST00000498041 SPCS1Q9Y6A9 102 aa1.3□□□□□ -2.2
RIF1-212ENST00000498041 VPS13DQ5THJ4 4388 aa1.29□□□□□ -2.2
RIF1-212ENST00000498041 CSMD3Q7Z407 3707 aa1.29□□□□□ -2.2
RIF1-212ENST00000498041 C9JAW5 83 aa1.29□□□□□ -2.2
RIF1-212ENST00000498041 NDUFC2-KCTD14E9PQ53 114 aa1.29□□□□□ -2.2
RIF1-212ENST00000498041 SCGB1C2P0DMR2 95 aa1.29□□□□□ -2.2
RIF1-212ENST00000498041 CKS1BP61024 79 aa1.29□□□□□ -2.2
RIF1-212ENST00000498041 ETDBQ3ZM63 59 aa1.29□□□□□ -2.2
RIF1-212ENST00000498041 Q8IZM0 81 aa1.29□□□□□ -2.2
RIF1-212ENST00000498041 Q9BRP9 147 aa1.29□□□□□ -2.2
RIF1-212ENST00000498041 PRO1854Q9UHT4 67 aa1.29□□□□□ -2.2
RIF1-212ENST00000498041 DNAH17Q9UFH2 4485 aa1.29□□□□□ -2.2
RIF1-212ENST00000498041 STARD9Q9P2P6 4700 aa1.28□□□□□ -2.2
RIF1-212ENST00000498041 PRKDCP78527 4128 aaKnown RBP1.28□□□□□ -2.2
RIF1-212ENST00000498041 SMIM26A0A096LP01 95 aa1.28□□□□□ -2.2
RIF1-212ENST00000498041 GVQW2A0A096LPI5 108 aaPredicted RBP1.28□□□□□ -2.2
RIF1-212ENST00000498041 TEX49A0A1B0GTD5 131 aa1.28□□□□□ -2.2
RIF1-212ENST00000498041 H3BNG1 76 aa1.28□□□□□ -2.2
RIF1-212ENST00000498041 M0R378 163 aa1.28□□□□□ -2.2
RIF1-212ENST00000498041 CRPP02741 224 aa1.28□□□□□ -2.2
RIF1-212ENST00000498041 KRTAP12-3P60328 96 aa1.28□□□□□ -2.2
RIF1-212ENST00000498041 KRTAP12-4P60329 112 aa1.28□□□□□ -2.2
RIF1-212ENST00000498041 TAL2Q16559 108 aa1.28□□□□□ -2.2
RIF1-212ENST00000498041 C6orf99Q4VX62 202 aa1.28□□□□□ -2.2
RIF1-212ENST00000498041 HRCT1Q6UXD1 115 aa1.28□□□□□ -2.2
RIF1-212ENST00000498041 ANKRD29Q8N6D5 301 aa1.28□□□□□ -2.2
RIF1-212ENST00000498041 Q8N814 137 aa1.28□□□□□ -2.2
RIF1-212ENST00000498041 SMCR5Q8TEV8 140 aa1.28□□□□□ -2.2
RIF1-212ENST00000498041 UPK3BQ9BT76 320 aa1.28□□□□□ -2.2
RIF1-212ENST00000498041 MUC5BQ9HC84 5762 aaPredicted RBP1.27□□□□□ -2.21
RIF1-212ENST00000498041 PLECQ15149 4684 aaKnown RBP1.27□□□□□ -2.21
RIF1-212ENST00000498041 TIMM17BO60830 172 aa1.27□□□□□ -2.21
RIF1-212ENST00000498041 IGLV6-57P01721 117 aa1.27□□□□□ -2.21
RIF1-212ENST00000498041 MT-ATP8P03928 68 aa1.27□□□□□ -2.21
RIF1-212ENST00000498041 BAALC-AS2P0C853 105 aa1.27□□□□□ -2.21
RIF1-212ENST00000498041 SEC11AP67812 179 aa1.27□□□□□ -2.21
RIF1-212ENST00000498041 SCXQ7RTU7 201 aa1.27□□□□□ -2.21
RIF1-212ENST00000498041 C15orf53Q8NAA6 179 aa1.27□□□□□ -2.21
RIF1-212ENST00000498041 DPH3Q96FX2 82 aa1.27□□□□□ -2.21
RIF1-212ENST00000498041 DNAH2Q9P225 4427 aa1.26□□□□□ -2.21
RIF1-212ENST00000498041 DNAH11Q96DT5 4516 aa1.26□□□□□ -2.21
RIF1-212ENST00000498041 PKD1P98161 4303 aa1.26□□□□□ -2.21
RIF1-212ENST00000498041 A0A0B4J2C4 111 aa1.26□□□□□ -2.21
RIF1-212ENST00000498041 IGKV3D-7A0A0C4DH55 119 aa1.26□□□□□ -2.21
RIF1-212ENST00000498041 TRBV30A0A0K0K1B3 111 aa1.26□□□□□ -2.21
RIF1-212ENST00000498041 PSCAO43653 123 aa1.26□□□□□ -2.21
RIF1-212ENST00000498041 RPL28P46779 137 aaKnown RBP1.26□□□□□ -2.21
RIF1-212ENST00000498041 KRTAP10-4P60372 401 aaPredicted RBP1.26□□□□□ -2.21
RIF1-212ENST00000498041 RPL37AP61513 92 aaKnown RBP1.26□□□□□ -2.21
RIF1-212ENST00000498041 TTC32Q5I0X7 151 aa1.26□□□□□ -2.21
RIF1-212ENST00000498041 C1orf134Q5TEV5 83 aa1.26□□□□□ -2.21
RIF1-212ENST00000498041 LINC00575Q6W349 94 aa1.26□□□□□ -2.21
RIF1-212ENST00000498041 C9orf163Q8N9P6 203 aa1.26□□□□□ -2.21
RIF1-212ENST00000498041 ZCCHC13Q8WW36 166 aaKnown RBP1.26□□□□□ -2.21
RIF1-212ENST00000498041 C14orf132Q9NPU4 83 aa1.26□□□□□ -2.21
RIF1-212ENST00000498041 LYSTQ99698 3801 aa1.26□□□□□ -2.21
RIF1-212ENST00000498041 ALMS1Q8TCU4 4167 aa1.25□□□□□ -2.21
RIF1-212ENST00000498041 TRAV23DV6A0A075B6W5 121 aa1.25□□□□□ -2.21
RIF1-212ENST00000498041 LCE6AA0A183 80 aa1.25□□□□□ -2.21
RIF1-212ENST00000498041 A0A1W2PNM2 257 aa1.25□□□□□ -2.21
RIF1-212ENST00000498041 NUPR2A6NF83 97 aa1.25□□□□□ -2.21
RIF1-212ENST00000498041 M0QXV9 152 aa1.25□□□□□ -2.21
RIF1-212ENST00000498041 LST1O00453 97 aa1.25□□□□□ -2.21
RIF1-212ENST00000498041 SLC25A20O43772 301 aa1.25□□□□□ -2.21
RIF1-212ENST00000498041 FABP2P12104 132 aa1.25□□□□□ -2.21
RIF1-212ENST00000498041 IFITM1P13164 125 aa1.25□□□□□ -2.21
RIF1-212ENST00000498041 COX7BP24311 80 aa1.25□□□□□ -2.21
RIF1-212ENST00000498041 OCIAD2Q56VL3 154 aa1.25□□□□□ -2.21
RIF1-212ENST00000498041 S100A7L2Q5SY68 101 aa1.25□□□□□ -2.21
RIF1-212ENST00000498041 Q6ZQY7 126 aa1.25□□□□□ -2.21
RIF1-212ENST00000498041 FAM19A1Q7Z5A9 133 aa1.25□□□□□ -2.21
RIF1-212ENST00000498041 SPACA4Q8TDM5 124 aa1.25□□□□□ -2.21
RIF1-212ENST00000498041 TMEM126AQ9H061 195 aa1.25□□□□□ -2.21
RIF1-212ENST00000498041 PSORS1C2Q9UIG4 136 aa1.25□□□□□ -2.21
RIF1-212ENST00000498041 KMT2AQ03164 3969 aa1.25□□□□□ -2.21
RIF1-212ENST00000498041 A0A087WVE0 104 aa1.24□□□□□ -2.21
RIF1-212ENST00000498041 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.24□□□□□ -2.21
RIF1-212ENST00000498041 TRBV10-2A0A0K0K1G8 114 aa1.24□□□□□ -2.21
RIF1-212ENST00000498041 LOC107984640A0A0U1RRK4 108 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms