RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 HIST1H2BKO60814 126 aa3.49□□□□□ -1.85
TMEM39A-212ENST00000497993 HIST1H2BJP06899 126 aa3.49□□□□□ -1.85
TMEM39A-212ENST00000497993 MT1HL1P0DM35 61 aa3.49□□□□□ -1.85
TMEM39A-212ENST00000497993 FABP2P12104 132 aa3.49□□□□□ -1.85
TMEM39A-212ENST00000497993 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
TMEM39A-212ENST00000497993 BAGE3Q86Y29 109 aa3.49□□□□□ -1.85
TMEM39A-212ENST00000497993 LINC00526Q96FQ7 95 aa3.49□□□□□ -1.85
TMEM39A-212ENST00000497993 C14orf144Q96I85 54 aa3.49□□□□□ -1.85
TMEM39A-212ENST00000497993 C6orf48Q9UBA6 75 aa3.49□□□□□ -1.85
TMEM39A-212ENST00000497993 TCL1BO95988 128 aa3.48□□□□□ -1.85
TMEM39A-212ENST00000497993 PHF5AQ7RTV0 110 aaKnown RBP3.48□□□□□ -1.85
TMEM39A-212ENST00000497993 IGKV2-24A0A0C4DH68 120 aa3.47□□□□□ -1.85
TMEM39A-212ENST00000497993 A0A1W2PNN7 141 aa3.47□□□□□ -1.85
TMEM39A-212ENST00000497993 H3BPC8 53 aa3.47□□□□□ -1.85
TMEM39A-212ENST00000497993 IGLC3P0DOY3 106 aa3.47□□□□□ -1.85
TMEM39A-212ENST00000497993 C9orf116Q5BN46 136 aaPredicted RBP3.47□□□□□ -1.85
TMEM39A-212ENST00000497993 SPINK6Q6UWN8 80 aa3.47□□□□□ -1.85
TMEM39A-212ENST00000497993 UNQ6190/PRO20217Q6UXQ8 127 aa3.47□□□□□ -1.85
TMEM39A-212ENST00000497993 C2orf91Q6ZV80 131 aa3.47□□□□□ -1.85
TMEM39A-212ENST00000497993 CST9LQ9H4G1 147 aa3.47□□□□□ -1.85
TMEM39A-212ENST00000497993 CDKN2A-AS1Q9UH64 79 aa3.47□□□□□ -1.85
TMEM39A-212ENST00000497993 F8VRH5 84 aa3.46□□□□□ -1.86
TMEM39A-212ENST00000497993 HBDP02042 147 aa3.46□□□□□ -1.86
TMEM39A-212ENST00000497993 PMCHL1Q16048 86 aa3.46□□□□□ -1.86
TMEM39A-212ENST00000497993 Q5XG85 94 aa3.46□□□□□ -1.86
TMEM39A-212ENST00000497993 LINC01600Q96MT4 127 aa3.46□□□□□ -1.86
TMEM39A-212ENST00000497993 TRAV12-1A0A0B4J245 112 aa3.45□□□□□ -1.86
TMEM39A-212ENST00000497993 H3BMG7 143 aa3.45□□□□□ -1.86
TMEM39A-212ENST00000497993 H3BT86 120 aa3.45□□□□□ -1.86
TMEM39A-212ENST00000497993 DSCR10P59022 87 aa3.45□□□□□ -1.86
TMEM39A-212ENST00000497993 FAM229BQ4G0N7 80 aa3.45□□□□□ -1.86
TMEM39A-212ENST00000497993 SFTA2Q6UW10 78 aa3.45□□□□□ -1.86
TMEM39A-212ENST00000497993 HMCN2Q8NDA2 5059 aa3.44□□□□□ -1.86
TMEM39A-212ENST00000497993 FABP4P15090 132 aa3.44□□□□□ -1.86
TMEM39A-212ENST00000497993 ZNF22P17026 224 aaPredicted RBP3.44□□□□□ -1.86
TMEM39A-212ENST00000497993 C2orf82Q6UX34 121 aa3.44□□□□□ -1.86
TMEM39A-212ENST00000497993 BRK1Q8WUW1 75 aa3.44□□□□□ -1.86
TMEM39A-212ENST00000497993 PSORS1C2Q9UIG4 136 aa3.44□□□□□ -1.86
TMEM39A-212ENST00000497993 M0R143 59 aa3.43□□□□□ -1.86
TMEM39A-212ENST00000497993 LEPROTL1O95214 131 aa3.43□□□□□ -1.86
TMEM39A-212ENST00000497993 RPL28P46779 137 aaKnown RBP3.43□□□□□ -1.86
TMEM39A-212ENST00000497993 KRTAP10-8P60410 259 aa3.43□□□□□ -1.86
TMEM39A-212ENST00000497993 LINC00483Q53H64 154 aa3.43□□□□□ -1.86
TMEM39A-212ENST00000497993 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
TMEM39A-212ENST00000497993 KRTAP11-1Q8IUC1 163 aa3.43□□□□□ -1.86
TMEM39A-212ENST00000497993 COX7B2Q8TF08 81 aa3.43□□□□□ -1.86
TMEM39A-212ENST00000497993 A0A1B0GU33 70 aa3.42□□□□□ -1.86
TMEM39A-212ENST00000497993 C11orf86A6NJI1 115 aa3.42□□□□□ -1.86
TMEM39A-212ENST00000497993 H3BRM9 83 aa3.42□□□□□ -1.86
TMEM39A-212ENST00000497993 NUPR1O60356 82 aa3.42□□□□□ -1.86
TMEM39A-212ENST00000497993 COX17Q14061 63 aa3.42□□□□□ -1.86
TMEM39A-212ENST00000497993 SPINT4Q6UDR6 99 aa3.42□□□□□ -1.86
TMEM39A-212ENST00000497993 DPH3Q96FX2 82 aa3.42□□□□□ -1.86
TMEM39A-212ENST00000497993 ZNF625Q96I27 306 aaPredicted RBP3.42□□□□□ -1.86
TMEM39A-212ENST00000497993 NHP2Q9NX24 153 aaKnown RBP3.42□□□□□ -1.86
TMEM39A-212ENST00000497993 KRTAP1-4P0C5Y4 121 aa3.41□□□□□ -1.86
TMEM39A-212ENST00000497993 FXYD2P54710 66 aa3.41□□□□□ -1.86
TMEM39A-212ENST00000497993 C1orf64Q8NEQ6 169 aa3.41□□□□□ -1.86
TMEM39A-212ENST00000497993 IFI27L1Q96BM0 104 aa3.41□□□□□ -1.86
TMEM39A-212ENST00000497993 PMCHL2Q9BQD1 86 aa3.41□□□□□ -1.86
TMEM39A-212ENST00000497993 TRAV7A0A075B6U4 112 aa3.4□□□□□ -1.87
TMEM39A-212ENST00000497993 SPINK8P0C7L1 97 aa3.4□□□□□ -1.87
TMEM39A-212ENST00000497993 PLNP26678 52 aa3.4□□□□□ -1.87
TMEM39A-212ENST00000497993 KRTAP13-1Q8IUC0 172 aa3.4□□□□□ -1.87
TMEM39A-212ENST00000497993 DIRC1Q969H9 104 aa3.4□□□□□ -1.87
TMEM39A-212ENST00000497993 PRO1933Q9H354 126 aa3.4□□□□□ -1.87
TMEM39A-212ENST00000497993 TOMM7Q9P0U1 55 aa3.4□□□□□ -1.87
TMEM39A-212ENST00000497993 LOC107984156A0A0G2JMH3 177 aa3.39□□□□□ -1.87
TMEM39A-212ENST00000497993 C1orf137Q5JT78 98 aa3.39□□□□□ -1.87
TMEM39A-212ENST00000497993 ARL17AQ8IVW1 177 aa3.39□□□□□ -1.87
TMEM39A-212ENST00000497993 COPS9Q8WXC6 57 aa3.39□□□□□ -1.87
TMEM39A-212ENST00000497993 SNHG12Q9BXW3 62 aa3.39□□□□□ -1.87
TMEM39A-212ENST00000497993 C22orf24Q9Y442 160 aa3.39□□□□□ -1.87
TMEM39A-212ENST00000497993 TRBV10-2A0A0K0K1G8 114 aa3.38□□□□□ -1.87
TMEM39A-212ENST00000497993 H7C2G1 150 aa3.38□□□□□ -1.87
TMEM39A-212ENST00000497993 K7ERJ3 54 aa3.38□□□□□ -1.87
TMEM39A-212ENST00000497993 OCIAD2Q56VL3 154 aa3.38□□□□□ -1.87
TMEM39A-212ENST00000497993 COL5A1-AS1Q5SY13 56 aa3.38□□□□□ -1.87
TMEM39A-212ENST00000497993 SOSTDC1Q6X4U4 206 aa3.38□□□□□ -1.87
TMEM39A-212ENST00000497993 Q8NDZ9 215 aa3.38□□□□□ -1.87
TMEM39A-212ENST00000497993 VAMP8Q9BV40 100 aa3.38□□□□□ -1.87
TMEM39A-212ENST00000497993 LRP2P98164 4655 aa3.38□□□□□ -1.87
TMEM39A-212ENST00000497993 UQCRQO14949 82 aa3.37□□□□□ -1.87
TMEM39A-212ENST00000497993 BCE1O60756 84 aa3.37□□□□□ -1.87
TMEM39A-212ENST00000497993 KRTAP10-12P60413 245 aa3.37□□□□□ -1.87
TMEM39A-212ENST00000497993 KRTDAPP60985 99 aa3.37□□□□□ -1.87
TMEM39A-212ENST00000497993 KRTAP5-11Q6L8G4 156 aa3.37□□□□□ -1.87
TMEM39A-212ENST00000497993 C7orf65Q6ZTY9 151 aa3.37□□□□□ -1.87
TMEM39A-212ENST00000497993 FAM19A2Q8N3H0 131 aa3.37□□□□□ -1.87
TMEM39A-212ENST00000497993 HIGD2AQ9BW72 106 aa3.37□□□□□ -1.87
TMEM39A-212ENST00000497993 SYS1-DBNDD2H3BUS1 97 aa3.36□□□□□ -1.87
TMEM39A-212ENST00000497993 TMEM170BQ5T4T1 132 aa3.36□□□□□ -1.87
TMEM39A-212ENST00000497993 LINC00167Q96N53 147 aa3.36□□□□□ -1.87
TMEM39A-212ENST00000497993 UQCR10Q9UDW1 63 aa3.36□□□□□ -1.87
TMEM39A-212ENST00000497993 IGKV2D-26A0A0A0MRZ7 120 aa3.35□□□□□ -1.87
TMEM39A-212ENST00000497993 SPRR1AP35321 89 aa3.35□□□□□ -1.87
TMEM39A-212ENST00000497993 KRTAP25-1Q3LHN0 102 aa3.35□□□□□ -1.87
TMEM39A-212ENST00000497993 LINC01545Q5VT33 79 aa3.35□□□□□ -1.87
TMEM39A-212ENST00000497993 Q8N9L7 120 aa3.35□□□□□ -1.87
TMEM39A-212ENST00000497993 UBR4Q5T4S7 5183 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms