RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 LINC00467Q9BRT7 94 aa1.2□□□□□ -2.22
CBX3-208ENST00000497498 XAGE1AQ9HD64 81 aa1.2□□□□□ -2.22
CBX3-208ENST00000497498 MRPL36Q9P0J6 103 aaKnown RBP1.2□□□□□ -2.22
CBX3-208ENST00000497498 LINC00588Q9Y4M8 146 aa1.2□□□□□ -2.22
CBX3-208ENST00000497498 SORL1Q92673 2214 aa1.2□□□□□ -2.22
CBX3-208ENST00000497498 HEATR1Q9H583 2144 aaKnown RBP1.19□□□□□ -2.22
CBX3-208ENST00000497498 IGLV10-54A0A075B6I4 117 aa1.19□□□□□ -2.22
CBX3-208ENST00000497498 IGIPA6NJ69 53 aa1.19□□□□□ -2.22
CBX3-208ENST00000497498 C17orf98A8MV24 154 aa1.19□□□□□ -2.22
CBX3-208ENST00000497498 H7C2G1 150 aa1.19□□□□□ -2.22
CBX3-208ENST00000497498 PRM2P04554 102 aa1.19□□□□□ -2.22
CBX3-208ENST00000497498 SAA2P0DJI9 122 aaPredicted RBP1.19□□□□□ -2.22
CBX3-208ENST00000497498 DEFA4P12838 97 aa1.19□□□□□ -2.22
CBX3-208ENST00000497498 RPL27AP46776 148 aaKnown RBP1.19□□□□□ -2.22
CBX3-208ENST00000497498 RPL28P46779 137 aaKnown RBP1.19□□□□□ -2.22
CBX3-208ENST00000497498 FXYD7P58549 80 aa1.19□□□□□ -2.22
CBX3-208ENST00000497498 DEFB114Q30KQ6 69 aa1.19□□□□□ -2.22
CBX3-208ENST00000497498 ZNF833PQ6ZTB9 187 aa1.19□□□□□ -2.22
CBX3-208ENST00000497498 FAM223AQ8IWN6 122 aa1.19□□□□□ -2.22
CBX3-208ENST00000497498 LINC00269Q8N2A0 174 aa1.19□□□□□ -2.22
CBX3-208ENST00000497498 TMEM254Q8TBM7 123 aa1.19□□□□□ -2.22
CBX3-208ENST00000497498 WFDC5Q8TCV5 224 aa1.19□□□□□ -2.22
CBX3-208ENST00000497498 OBSCN-AS1Q96MR7 158 aa1.19□□□□□ -2.22
CBX3-208ENST00000497498 TTTY13Q9BZ97 58 aa1.19□□□□□ -2.22
CBX3-208ENST00000497498 ORMDL1Q9P0S3 153 aa1.19□□□□□ -2.22
CBX3-208ENST00000497498 LRP1Q07954 4544 aaKnown RBP1.19□□□□□ -2.22
CBX3-208ENST00000497498 DNAH5Q8TE73 4624 aa1.19□□□□□ -2.22
CBX3-208ENST00000497498 LRP1BQ9NZR2 4599 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 MED12Q93074 2177 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 IGKV1D-37A0A075B6S9 117 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 TRAV23DV6A0A075B6W5 121 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 TRBV6-8A0A0A6YYG3 113 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 TRAV21A0A0B4J279 112 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 IGHV1-18A0A0C4DH31 117 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 IGKV3D-7A0A0C4DH55 119 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 TRBV7-4A0A0J9YYF1 115 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 TRBV6-5A0A0K0K1A5 114 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 A8MUN3 132 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 H0YGG7 62 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 H3BPC8 53 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 H3BRN7 92 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 M0R1W7 72 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 NDUFA1O15239 70 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 RNASE4P34096 147 aaKnown RBP1.18□□□□□ -2.22
CBX3-208ENST00000497498 SS18Q15532 418 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 NREPQ16612 68 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 LINC01554Q52M75 96 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 HCP5Q6MZN7 132 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 CASC2Q6XLA1 102 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 LINC00322Q6ZN03 302 aaPredicted RBP1.18□□□□□ -2.22
CBX3-208ENST00000497498 SCXQ7RTU7 201 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 TMEM167AQ8TBQ9 72 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 CLEC2BQ92478 149 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 B9D2Q9BPU9 175 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 Q9BRP9 147 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 HIGD2AQ9BW72 106 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 CDC42SE1Q9NRR8 79 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 LINC00846Q9NV44 126 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 NDUFA12Q9UI09 145 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 MPDZO75970 2070 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 HEATR5BQ9P2D3 2071 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 MALRD1Q5VYJ5 2156 aa1.18□□□□□ -2.22
CBX3-208ENST00000497498 ALPK2Q86TB3 2170 aa1.17□□□□□ -2.22
CBX3-208ENST00000497498 VPS13BQ7Z7G8 4022 aa1.17□□□□□ -2.22
CBX3-208ENST00000497498 LOC110117498A0A087WWA1 95 aa1.17□□□□□ -2.22
CBX3-208ENST00000497498 IGKV1D-43A0A0B4J1Z2 117 aa1.17□□□□□ -2.22
CBX3-208ENST00000497498 hDV103S1A0JD37 113 aa1.17□□□□□ -2.22
CBX3-208ENST00000497498 E7EUB6 86 aa1.17□□□□□ -2.22
CBX3-208ENST00000497498 BUB1B-PAK6H3BSN5 160 aa1.17□□□□□ -2.22
CBX3-208ENST00000497498 IGHV3-30-3P0DP02 117 aa1.17□□□□□ -2.22
CBX3-208ENST00000497498 CD24P25063 80 aa1.17□□□□□ -2.22
CBX3-208ENST00000497498 C9orf116Q5BN46 136 aaPredicted RBP1.17□□□□□ -2.22
CBX3-208ENST00000497498 SPINK9Q5DT21 86 aa1.17□□□□□ -2.22
CBX3-208ENST00000497498 ENHOQ6UWT2 76 aa1.17□□□□□ -2.22
CBX3-208ENST00000497498 PATE2Q6UY27 113 aa1.17□□□□□ -2.22
CBX3-208ENST00000497498 CCL4L1Q8NHW4 92 aa1.17□□□□□ -2.22
CBX3-208ENST00000497498 AMELXQ99217 191 aa1.17□□□□□ -2.22
CBX3-208ENST00000497498 CYSTM1Q9H1C7 97 aa1.17□□□□□ -2.22
CBX3-208ENST00000497498 NDUFA4L2Q9NRX3 87 aa1.17□□□□□ -2.22
CBX3-208ENST00000497498 LINC00474Q9P2X8 69 aa1.17□□□□□ -2.22
CBX3-208ENST00000497498 EML6Q6ZMW3 1958 aa1.17□□□□□ -2.22
CBX3-208ENST00000497498 FAT3Q8TDW7 4589 aa1.17□□□□□ -2.22
CBX3-208ENST00000497498 MYOFQ9NZM1 2061 aa1.17□□□□□ -2.22
CBX3-208ENST00000497498 SPTBP11277 2137 aa1.16□□□□□ -2.22
CBX3-208ENST00000497498 MACF1Q9UPN3 7388 aaKnown RBP1.16□□□□□ -2.22
CBX3-208ENST00000497498 A0A087WVE0 104 aa1.16□□□□□ -2.22
CBX3-208ENST00000497498 TRAV12-3A0A0B4J271 114 aa1.16□□□□□ -2.22
CBX3-208ENST00000497498 TRAV22A0A0B4J277 110 aa1.16□□□□□ -2.22
CBX3-208ENST00000497498 SPTY2D1-AS1A0A0U1RR47 76 aa1.16□□□□□ -2.22
CBX3-208ENST00000497498 LOC101927531A0A1B0GV80 90 aa1.16□□□□□ -2.22
CBX3-208ENST00000497498 A0A1W2PNM2 257 aa1.16□□□□□ -2.22
CBX3-208ENST00000497498 A6NN06 94 aa1.16□□□□□ -2.22
CBX3-208ENST00000497498 HCG22E2RYF7 251 aa1.16□□□□□ -2.22
CBX3-208ENST00000497498 CHKB-CPT1BH3BT56 60 aa1.16□□□□□ -2.22
CBX3-208ENST00000497498 GNRH2O43555 120 aa1.16□□□□□ -2.22
CBX3-208ENST00000497498 LY6HO94772 140 aa1.16□□□□□ -2.22
CBX3-208ENST00000497498 CLPSP04118 112 aa1.16□□□□□ -2.22
CBX3-208ENST00000497498 POLR2KP53803 58 aaKnown RBP1.16□□□□□ -2.22
CBX3-208ENST00000497498 NNATQ16517 81 aa1.16□□□□□ -2.22
CBX3-208ENST00000497498 DEFB133Q30KQ1 61 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms