RNA–Protein interactions for RNA: ENST00000497122.5

SOX2-OT-216, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 578 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-216ENST00000497122 DEFB130AP0DP74 79 aa0.46□□□□□ -2.34
SOX2-OT-216ENST00000497122 INO80Q9ULG1 1556 aaPredicted RBP0.45□□□□□ -2.34
SOX2-OT-216ENST00000497122 MUC5BQ9HC84 5762 aaPredicted RBP0.45□□□□□ -2.34
SOX2-OT-216ENST00000497122 SPRR2DP22532 72 aa0.45□□□□□ -2.34
SOX2-OT-216ENST00000497122 CCDC180Q9P1Z9 1646 aa0.45□□□□□ -2.34
SOX2-OT-216ENST00000497122 EP300Q09472 2414 aaPredicted RBP0.45□□□□□ -2.34
SOX2-OT-216ENST00000497122 MAP1BP46821 2468 aaKnown RBP0.44□□□□□ -2.34
SOX2-OT-216ENST00000497122 RNF17Q9BXT8 1623 aaKnown RBP0.43□□□□□ -2.34
SOX2-OT-216ENST00000497122 THOC2Q8NI27 1593 aaKnown RBP0.43□□□□□ -2.34
SOX2-OT-216ENST00000497122 TRANK1O15050 2925 aa0.43□□□□□ -2.34
SOX2-OT-216ENST00000497122 DMBT1Q9UGM3 2413 aaPredicted RBP0.43□□□□□ -2.34
SOX2-OT-216ENST00000497122 ALMS1Q8TCU4 4167 aa0.42□□□□□ -2.34
SOX2-OT-216ENST00000497122 DEFB114Q30KQ6 69 aa0.42□□□□□ -2.34
SOX2-OT-216ENST00000497122 APC2O95996 2303 aa0.41□□□□□ -2.34
SOX2-OT-216ENST00000497122 SFTA3P0C7M3 94 aa0.41□□□□□ -2.34
SOX2-OT-216ENST00000497122 ERICH3Q5RHP9 1530 aa0.4□□□□□ -2.35
SOX2-OT-216ENST00000497122 FCER1GP30273 86 aa0.4□□□□□ -2.35
SOX2-OT-216ENST00000497122 CACNA1AO00555 2505 aa0.39□□□□□ -2.35
SOX2-OT-216ENST00000497122 ABCC6O95255 1503 aa0.39□□□□□ -2.35
SOX2-OT-216ENST00000497122 MINOS1Q5TGZ0 78 aa0.39□□□□□ -2.35
SOX2-OT-216ENST00000497122 NCBP2-AS2Q69YL0 99 aa0.39□□□□□ -2.35
SOX2-OT-216ENST00000497122 SMIM5Q71RC9 77 aa0.39□□□□□ -2.35
SOX2-OT-216ENST00000497122 HMCN2Q8NDA2 5059 aa0.38□□□□□ -2.35
SOX2-OT-216ENST00000497122 KIAA0586Q9BVV6 1533 aa0.38□□□□□ -2.35
SOX2-OT-216ENST00000497122 MDN1Q9NU22 5596 aa0.37□□□□□ -2.35
SOX2-OT-216ENST00000497122 C3P01024 1663 aa0.37□□□□□ -2.35
SOX2-OT-216ENST00000497122 HSPG2P98160 4391 aa0.36□□□□□ -2.35
SOX2-OT-216ENST00000497122 MUC5ACP98088 5654 aa0.36□□□□□ -2.35
SOX2-OT-216ENST00000497122 LYSTQ99698 3801 aa0.36□□□□□ -2.35
SOX2-OT-216ENST00000497122 SETXQ7Z333 2677 aaKnown RBP0.36□□□□□ -2.35
SOX2-OT-216ENST00000497122 ABCA6Q8N139 1617 aa0.36□□□□□ -2.35
SOX2-OT-216ENST00000497122 COL7A1Q02388 2944 aa0.35□□□□□ -2.35
SOX2-OT-216ENST00000497122 DCHS2Q6V1P9 2916 aa0.35□□□□□ -2.35
SOX2-OT-216ENST00000497122 BPTFQ12830 3046 aa0.34□□□□□ -2.35
SOX2-OT-216ENST00000497122 M0R1W7 72 aa0.34□□□□□ -2.36
SOX2-OT-216ENST00000497122 HECTD4Q9Y4D8 3996 aa0.34□□□□□ -2.36
SOX2-OT-216ENST00000497122 ACANP16112 2415 aa0.33□□□□□ -2.36
SOX2-OT-216ENST00000497122 K7EMI3 77 aa0.32□□□□□ -2.36
SOX2-OT-216ENST00000497122 SPRR2GQ9BYE4 73 aa0.31□□□□□ -2.36
SOX2-OT-216ENST00000497122 NMES1Q9C002 83 aa0.31□□□□□ -2.36
SOX2-OT-216ENST00000497122 GPR98Q8WXG9 6306 aa0.31□□□□□ -2.36
SOX2-OT-216ENST00000497122 DSPP15924 2871 aaKnown RBP0.31□□□□□ -2.36
SOX2-OT-216ENST00000497122 C6orf48Q9UBA6 75 aa0.3□□□□□ -2.36
SOX2-OT-216ENST00000497122 AKAP13Q12802 2813 aa0.3□□□□□ -2.36
SOX2-OT-216ENST00000497122 PCNX1Q96RV3 2341 aa0.3□□□□□ -2.36
SOX2-OT-216ENST00000497122 FLNBO75369 2602 aaKnown RBP0.29□□□□□ -2.36
SOX2-OT-216ENST00000497122 SPRR2BP35325 72 aa0.29□□□□□ -2.36
SOX2-OT-216ENST00000497122 DEFB106AQ8N104 65 aa0.29□□□□□ -2.36
SOX2-OT-216ENST00000497122 PRLHP81277 87 aa0.28□□□□□ -2.36
SOX2-OT-216ENST00000497122 SERF2P84101 59 aa0.28□□□□□ -2.36
SOX2-OT-216ENST00000497122 NBASA2RRP1 2371 aa0.27□□□□□ -2.37
SOX2-OT-216ENST00000497122 S4R3F8 94 aa0.26□□□□□ -2.37
SOX2-OT-216ENST00000497122 GLI2P10070 1586 aa0.26□□□□□ -2.37
SOX2-OT-216ENST00000497122 ANKRD36CQ5JPF3 1778 aa0.26□□□□□ -2.37
SOX2-OT-216ENST00000497122 FLNCQ14315 2725 aa0.26□□□□□ -2.37
SOX2-OT-216ENST00000497122 NSD1Q96L73 2696 aaPredicted RBP0.25□□□□□ -2.37
SOX2-OT-216ENST00000497122 RPS27P42677 84 aaKnown RBP0.25□□□□□ -2.37
SOX2-OT-216ENST00000497122 WT1-ASQ06250 92 aa0.25□□□□□ -2.37
SOX2-OT-216ENST00000497122 RPS27LQ71UM5 84 aaKnown RBP0.25□□□□□ -2.37
SOX2-OT-216ENST00000497122 KMT2DO14686 5537 aa0.25□□□□□ -2.37
SOX2-OT-216ENST00000497122 TNRC18O15417 2968 aaPredicted RBP0.24□□□□□ -2.37
SOX2-OT-216ENST00000497122 TIAM1Q13009 1591 aa0.23□□□□□ -2.37
SOX2-OT-216ENST00000497122 CPS1P31327 1500 aa0.23□□□□□ -2.37
SOX2-OT-216ENST00000497122 HECTD1Q9ULT8 2610 aa0.22□□□□□ -2.37
SOX2-OT-216ENST00000497122 PRRC2CQ9Y520 2896 aaKnown RBP0.22□□□□□ -2.37
SOX2-OT-216ENST00000497122 ABCA10Q8WWZ4 1543 aa0.22□□□□□ -2.37
SOX2-OT-216ENST00000497122 ITSN2Q9NZM3 1697 aa0.21□□□□□ -2.38
SOX2-OT-216ENST00000497122 UGGT1Q9NYU2 1555 aa0.21□□□□□ -2.38
SOX2-OT-216ENST00000497122 H3BNG1 76 aa0.21□□□□□ -2.38
SOX2-OT-216ENST00000497122 KIF1AQ12756 1690 aa0.21□□□□□ -2.38
SOX2-OT-216ENST00000497122 LY75O60449 1722 aa0.2□□□□□ -2.38
SOX2-OT-216ENST00000497122 FLNAP21333 2647 aaKnown RBP0.2□□□□□ -2.38
SOX2-OT-216ENST00000497122 ALS2Q96Q42 1657 aa0.2□□□□□ -2.38
SOX2-OT-216ENST00000497122 PRXQ9BXM0 1461 aa0.19□□□□□ -2.38
SOX2-OT-216ENST00000497122 EEA1Q15075 1411 aa0.18□□□□□ -2.38
SOX2-OT-216ENST00000497122 CROCC2H7BZ55 1655 aa0.17□□□□□ -2.38
SOX2-OT-216ENST00000497122 LRP1BQ9NZR2 4599 aa0.16□□□□□ -2.38
SOX2-OT-216ENST00000497122 LRP2P98164 4655 aa0.15□□□□□ -2.38
SOX2-OT-216ENST00000497122 IGIPA6NJ69 53 aa0.15□□□□□ -2.39
SOX2-OT-216ENST00000497122 TIMM8BQ9Y5J9 83 aaPredicted RBP0.15□□□□□ -2.39
SOX2-OT-216ENST00000497122 SYNE2Q8WXH0 6885 aaKnown RBP0.15□□□□□ -2.39
SOX2-OT-216ENST00000497122 CREBBPQ92793 2442 aa0.14□□□□□ -2.39
SOX2-OT-216ENST00000497122 C9orf92A6NGG3 77 aa0.13□□□□□ -2.39
SOX2-OT-216ENST00000497122 H3BUA1 57 aa0.13□□□□□ -2.39
SOX2-OT-216ENST00000497122 FSIP2Q5CZC0 6907 aa0.13□□□□□ -2.39
SOX2-OT-216ENST00000497122 VPS13BQ7Z7G8 4022 aa0.13□□□□□ -2.39
SOX2-OT-216ENST00000497122 TMEM167BQ9NRX6 74 aa0.12□□□□□ -2.39
SOX2-OT-216ENST00000497122 SPTBN4Q9H254 2564 aa0.12□□□□□ -2.39
SOX2-OT-216ENST00000497122 CDC42BPAQ5VT25 1732 aa0.12□□□□□ -2.39
SOX2-OT-216ENST00000497122 COL6A3P12111 3177 aa0.11□□□□□ -2.39
SOX2-OT-216ENST00000497122 LINC00308Q8TCZ7 52 aa0.11□□□□□ -2.39
SOX2-OT-216ENST00000497122 ZANQ9Y493 2812 aa0.11□□□□□ -2.39
SOX2-OT-216ENST00000497122 TENM2Q9NT68 2774 aa0.1□□□□□ -2.39
SOX2-OT-216ENST00000497122 CLASP1Q7Z460 1538 aa0.1□□□□□ -2.39
SOX2-OT-216ENST00000497122 SVEP1Q4LDE5 3571 aa0.1□□□□□ -2.39
SOX2-OT-216ENST00000497122 KRTAP6-2Q3LI66 62 aa0.09□□□□□ -2.4
SOX2-OT-216ENST00000497122 TOGARAM1Q9Y4F4 1720 aa0.09□□□□□ -2.4
SOX2-OT-216ENST00000497122 PKHD1P08F94 4074 aa0.09□□□□□ -2.4
SOX2-OT-216ENST00000497122 PKD1P98161 4303 aa0.09□□□□□ -2.4
SOX2-OT-216ENST00000497122 NF1P21359 2839 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms