RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 PLA2G1BP04054 148 aaKnown RBP5.24□□□□□ -1.57
USP54-215ENST00000497106 NDUFC1O43677 76 aa5.24□□□□□ -1.57
USP54-215ENST00000497106 NBEAL1Q6ZS30 2694 aa5.23□□□□□ -1.57
USP54-215ENST00000497106 C20orf197Q8N268 126 aa5.23□□□□□ -1.57
USP54-215ENST00000497106 IGKV3D-7A0A0C4DH55 119 aa5.23□□□□□ -1.57
USP54-215ENST00000497106 TRBV7-4A0A0J9YYF1 115 aa5.23□□□□□ -1.57
USP54-215ENST00000497106 FAM229AH3BQW9 127 aa5.23□□□□□ -1.57
USP54-215ENST00000497106 VWFP04275 2813 aa5.23□□□□□ -1.57
USP54-215ENST00000497106 KRTAP4-16G5E9R7 235 aaPredicted RBP5.22□□□□□ -1.57
USP54-215ENST00000497106 SCXQ7RTU7 201 aa5.22□□□□□ -1.57
USP54-215ENST00000497106 SPRR1BP22528 89 aa5.22□□□□□ -1.57
USP54-215ENST00000497106 SPRR4Q96PI1 79 aa5.22□□□□□ -1.57
USP54-215ENST00000497106 CXCL6P80162 114 aa5.22□□□□□ -1.57
USP54-215ENST00000497106 LIMD2Q9BT23 127 aa5.21□□□□□ -1.58
USP54-215ENST00000497106 CIRBP-AS1Q8TBR5 109 aa5.21□□□□□ -1.58
USP54-215ENST00000497106 SSBP3-AS1Q7Z2R9 100 aa5.21□□□□□ -1.58
USP54-215ENST00000497106 LINC00846Q9NV44 126 aa5.21□□□□□ -1.58
USP54-215ENST00000497106 Q6ZVQ6 151 aa5.2□□□□□ -1.58
USP54-215ENST00000497106 STAB2Q8WWQ8 2551 aa5.2□□□□□ -1.58
USP54-215ENST00000497106 H7BZZ5 65 aa5.2□□□□□ -1.58
USP54-215ENST00000497106 KRTAP10-2P60368 255 aa5.2□□□□□ -1.58
USP54-215ENST00000497106 ERC2-IT1O76042 136 aa5.19□□□□□ -1.58
USP54-215ENST00000497106 TRAV7A0A075B6U4 112 aa5.19□□□□□ -1.58
USP54-215ENST00000497106 MOBPQ13875 183 aa5.18□□□□□ -1.58
USP54-215ENST00000497106 A0A087WSZ3 146 aa5.18□□□□□ -1.58
USP54-215ENST00000497106 FAM229BQ4G0N7 80 aa5.18□□□□□ -1.58
USP54-215ENST00000497106 A0A087WVE0 104 aa5.18□□□□□ -1.58
USP54-215ENST00000497106 MPLKIPQ8TAP9 179 aa5.18□□□□□ -1.58
USP54-215ENST00000497106 IGLV8-61A0A075B6I0 122 aa5.17□□□□□ -1.58
USP54-215ENST00000497106 KRTAP10-1P60331 282 aa5.17□□□□□ -1.58
USP54-215ENST00000497106 TENM3Q9P273 2699 aa5.17□□□□□ -1.58
USP54-215ENST00000497106 KRTAP7-1Q8IUC3 87 aa5.17□□□□□ -1.58
USP54-215ENST00000497106 SPINK6Q6UWN8 80 aa5.17□□□□□ -1.58
USP54-215ENST00000497106 KLKP1Q107X0 134 aa5.17□□□□□ -1.58
USP54-215ENST00000497106 IGFL1Q6UW32 110 aa5.16□□□□□ -1.58
USP54-215ENST00000497106 LINC01547P58512 204 aaPredicted RBP5.16□□□□□ -1.58
USP54-215ENST00000497106 HUWE1Q7Z6Z7 4374 aaKnown RBP5.16□□□□□ -1.58
USP54-215ENST00000497106 ANK2Q01484 3957 aa5.16□□□□□ -1.58
USP54-215ENST00000497106 TRRAPQ9Y4A5 3859 aa5.15□□□□□ -1.58
USP54-215ENST00000497106 PANO1I0J062 215 aa5.15□□□□□ -1.58
USP54-215ENST00000497106 LINC00483Q53H64 154 aa5.15□□□□□ -1.59
USP54-215ENST00000497106 SPAG11AQ6PDA7 123 aa5.15□□□□□ -1.59
USP54-215ENST00000497106 ZFHX3Q15911 3703 aa5.14□□□□□ -1.59
USP54-215ENST00000497106 RBM12B-AS1Q9P1G2 102 aa5.14□□□□□ -1.59
USP54-215ENST00000497106 NDUFS5O43920 106 aa5.14□□□□□ -1.59
USP54-215ENST00000497106 KTN1-AS1Q86SY8 53 aa5.13□□□□□ -1.59
USP54-215ENST00000497106 Q6ZSA8 131 aa5.13□□□□□ -1.59
USP54-215ENST00000497106 TYMSOSQ8TAI1 123 aa5.13□□□□□ -1.59
USP54-215ENST00000497106 CUBNO60494 3623 aa5.11□□□□□ -1.59
USP54-215ENST00000497106 KRTAP13-1Q8IUC0 172 aa5.11□□□□□ -1.59
USP54-215ENST00000497106 DNAH3Q8TD57 4116 aa5.11□□□□□ -1.59
USP54-215ENST00000497106 H3BS24 57 aa5.11□□□□□ -1.59
USP54-215ENST00000497106 A0A1W2PNM2 257 aa5.11□□□□□ -1.59
USP54-215ENST00000497106 SMIM29Q86T20 159 aa5.11□□□□□ -1.59
USP54-215ENST00000497106 IGKV4-1P06312 121 aa5.11□□□□□ -1.59
USP54-215ENST00000497106 MP68P56378 58 aa5.1□□□□□ -1.59
USP54-215ENST00000497106 FAM30AQ9NZY2 134 aa5.1□□□□□ -1.59
USP54-215ENST00000497106 SNURFQ9Y675 71 aa5.1□□□□□ -1.59
USP54-215ENST00000497106 DNAH9Q9NYC9 4486 aa5.09□□□□□ -1.59
USP54-215ENST00000497106 HCG22E2RYF7 251 aa5.08□□□□□ -1.6
USP54-215ENST00000497106 A8MWP4 228 aa5.07□□□□□ -1.6
USP54-215ENST00000497106 SMR3BP02814 79 aaPredicted RBP5.07□□□□□ -1.6
USP54-215ENST00000497106 LINC00304Q8N9R0 145 aa5.07□□□□□ -1.6
USP54-215ENST00000497106 C8orf87E5RJ46 101 aa5.07□□□□□ -1.6
USP54-215ENST00000497106 SPINK1P00995 79 aa5.07□□□□□ -1.6
USP54-215ENST00000497106 KRTAP11-1Q8IUC1 163 aa5.07□□□□□ -1.6
USP54-215ENST00000497106 Q1T7F1 81 aa5.06□□□□□ -1.6
USP54-215ENST00000497106 CASC2Q6XLA1 102 aa5.06□□□□□ -1.6
USP54-215ENST00000497106 PKD1L1Q8TDX9 2849 aa5.05□□□□□ -1.6
USP54-215ENST00000497106 WFDC13Q8IUB5 93 aa5.04□□□□□ -1.6
USP54-215ENST00000497106 CMYA5Q8N3K9 4069 aa5.04□□□□□ -1.6
USP54-215ENST00000497106 ALMS1Q8TCU4 4167 aa5.04□□□□□ -1.6
USP54-215ENST00000497106 IGHV6-1A0A0B4J1U7 121 aa5.04□□□□□ -1.6
USP54-215ENST00000497106 TP53AIP1Q9HCN2 124 aa5.03□□□□□ -1.6
USP54-215ENST00000497106 A0A1B0GVY2 172 aa5.03□□□□□ -1.6
USP54-215ENST00000497106 ANAPC11Q9NYG5 84 aa5.03□□□□□ -1.6
USP54-215ENST00000497106 DEFB116Q30KQ4 102 aa5.01□□□□□ -1.61
USP54-215ENST00000497106 TMEM254Q8TBM7 123 aa5.01□□□□□ -1.61
USP54-215ENST00000497106 hDV103S1A0JD37 113 aa5□□□□□ -1.61
USP54-215ENST00000497106 A0A1B0GVX0 72 aa5□□□□□ -1.61
USP54-215ENST00000497106 LCA10Q71F78 164 aa5□□□□□ -1.61
USP54-215ENST00000497106 K7EQZ3 153 aa4.99□□□□□ -1.61
USP54-215ENST00000497106 RPS29P62273 56 aaKnown RBP4.99□□□□□ -1.61
USP54-215ENST00000497106 Q5VSD8 79 aa4.99□□□□□ -1.61
USP54-215ENST00000497106 Q8N9L7 120 aa4.99□□□□□ -1.61
USP54-215ENST00000497106 H3BPC8 53 aa4.99□□□□□ -1.61
USP54-215ENST00000497106 A0A0G2JQZ4 141 aa4.98□□□□□ -1.61
USP54-215ENST00000497106 LINC00313P59037 77 aa4.98□□□□□ -1.61
USP54-215ENST00000497106 C7orf65Q6ZTY9 151 aa4.98□□□□□ -1.61
USP54-215ENST00000497106 ASB16-AS1Q495Z4 193 aa4.97□□□□□ -1.61
USP54-215ENST00000497106 ATP11AUNQ6ZP68 121 aa4.97□□□□□ -1.61
USP54-215ENST00000497106 PSPHP1O15172 72 aa4.97□□□□□ -1.61
USP54-215ENST00000497106 C8orf17Q9NRJ1 99 aa4.97□□□□□ -1.61
USP54-215ENST00000497106 LINC00472Q9H8W2 130 aa4.97□□□□□ -1.61
USP54-215ENST00000497106 FBN3Q75N90 2809 aa4.96□□□□□ -1.61
USP54-215ENST00000497106 PRR26Q8N8Z3 221 aa4.96□□□□□ -1.61
USP54-215ENST00000497106 SPTSSBQ8NFR3 76 aa4.96□□□□□ -1.62
USP54-215ENST00000497106 MRPL34Q9BQ48 92 aaKnown RBP4.96□□□□□ -1.62
USP54-215ENST00000497106 TRAV22A0A0B4J277 110 aa4.95□□□□□ -1.62
USP54-215ENST00000497106 DSCR10P59022 87 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms