RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 CROCC2H7BZ55 1655 aa0.24□□□□□ -2.37
VPS26A-208ENST00000497022 USF3Q68DE3 2245 aa0.23□□□□□ -2.37
VPS26A-208ENST00000497022 AGLP35573 1532 aa0.23□□□□□ -2.37
VPS26A-208ENST00000497022 ZFYVE26Q68DK2 2539 aa0.23□□□□□ -2.37
VPS26A-208ENST00000497022 TNRC18O15417 2968 aaPredicted RBP0.23□□□□□ -2.37
VPS26A-208ENST00000497022 SPTBN1Q01082 2364 aaKnown RBP0.23□□□□□ -2.37
VPS26A-208ENST00000497022 LINC01549A6NIU2 74 aa0.23□□□□□ -2.37
VPS26A-208ENST00000497022 SPRR1BP22528 89 aa0.23□□□□□ -2.37
VPS26A-208ENST00000497022 H1FX-AS1Q4G0G2 97 aa0.23□□□□□ -2.37
VPS26A-208ENST00000497022 A0A1B0GUL6 1792 aa0.23□□□□□ -2.37
VPS26A-208ENST00000497022 DOPEY2Q9Y3R5 2298 aa0.23□□□□□ -2.37
VPS26A-208ENST00000497022 ABCA5Q8WWZ7 1642 aa0.23□□□□□ -2.37
VPS26A-208ENST00000497022 PTPRQQ9UMZ3 2332 aa0.22□□□□□ -2.37
VPS26A-208ENST00000497022 FANCD2Q9BXW9 1451 aa0.22□□□□□ -2.37
VPS26A-208ENST00000497022 MAST4O15021 2626 aa0.22□□□□□ -2.37
VPS26A-208ENST00000497022 CACNA1AO00555 2505 aa0.22□□□□□ -2.37
VPS26A-208ENST00000497022 IQGAP1P46940 1657 aa0.22□□□□□ -2.37
VPS26A-208ENST00000497022 NDUFA3O95167 84 aa0.22□□□□□ -2.37
VPS26A-208ENST00000497022 CRIP1P50238 77 aa0.22□□□□□ -2.37
VPS26A-208ENST00000497022 Q5VSD8 79 aa0.22□□□□□ -2.37
VPS26A-208ENST00000497022 NCBP2-AS2Q69YL0 99 aa0.22□□□□□ -2.37
VPS26A-208ENST00000497022 Q8IZM0 81 aa0.22□□□□□ -2.37
VPS26A-208ENST00000497022 S100ZQ8WXG8 99 aa0.22□□□□□ -2.37
VPS26A-208ENST00000497022 NSD1Q96L73 2696 aaPredicted RBP0.22□□□□□ -2.37
VPS26A-208ENST00000497022 CPS1P31327 1500 aa0.22□□□□□ -2.37
VPS26A-208ENST00000497022 SPENQ96T58 3664 aaKnown RBP0.22□□□□□ -2.37
VPS26A-208ENST00000497022 FAT1Q14517 4588 aa0.21□□□□□ -2.38
VPS26A-208ENST00000497022 GOLGA4Q13439 2230 aaKnown RBP0.21□□□□□ -2.38
VPS26A-208ENST00000497022 UBR5O95071 2799 aaPredicted RBP0.21□□□□□ -2.38
VPS26A-208ENST00000497022 SPTY2D1-AS1A0A0U1RR47 76 aa0.21□□□□□ -2.38
VPS26A-208ENST00000497022 ATXN8Q156A1 80 aa0.21□□□□□ -2.38
VPS26A-208ENST00000497022 DEFB105AQ8NG35 78 aa0.21□□□□□ -2.38
VPS26A-208ENST00000497022 KCNQ1DNQ9H478 68 aa0.21□□□□□ -2.38
VPS26A-208ENST00000497022 HECTD1Q9ULT8 2610 aa0.21□□□□□ -2.38
VPS26A-208ENST00000497022 ANKRD36CQ5JPF3 1778 aa0.21□□□□□ -2.38
VPS26A-208ENST00000497022 CUBNO60494 3623 aa0.21□□□□□ -2.38
VPS26A-208ENST00000497022 HERC1Q15751 4861 aa0.2□□□□□ -2.38
VPS26A-208ENST00000497022 PKD1L1Q8TDX9 2849 aa0.2□□□□□ -2.38
VPS26A-208ENST00000497022 FLNCQ14315 2725 aa0.2□□□□□ -2.38
VPS26A-208ENST00000497022 NFAT5O94916 1531 aa0.2□□□□□ -2.38
VPS26A-208ENST00000497022 SPINK1P00995 79 aa0.2□□□□□ -2.38
VPS26A-208ENST00000497022 PRM1P04553 51 aa0.2□□□□□ -2.38
VPS26A-208ENST00000497022 APLNQ9ULZ1 77 aa0.2□□□□□ -2.38
VPS26A-208ENST00000497022 UNC79Q9P2D8 2635 aa0.2□□□□□ -2.38
VPS26A-208ENST00000497022 KNL1Q8NG31 2342 aa0.2□□□□□ -2.38
VPS26A-208ENST00000497022 DNAH5Q8TE73 4624 aa0.2□□□□□ -2.38
VPS26A-208ENST00000497022 SETXQ7Z333 2677 aaKnown RBP0.2□□□□□ -2.38
VPS26A-208ENST00000497022 HRNRQ86YZ3 2850 aaPredicted RBP0.2□□□□□ -2.38
VPS26A-208ENST00000497022 TOP2AP11388 1531 aaKnown RBP0.19□□□□□ -2.38
VPS26A-208ENST00000497022 DNAH17Q9UFH2 4485 aa0.19□□□□□ -2.38
VPS26A-208ENST00000497022 IGIPA6NJ69 53 aa0.19□□□□□ -2.38
VPS26A-208ENST00000497022 NDUFB1O75438 58 aa0.19□□□□□ -2.38
VPS26A-208ENST00000497022 COX6B1P14854 86 aa0.19□□□□□ -2.38
VPS26A-208ENST00000497022 GNG13Q9P2W3 67 aa0.19□□□□□ -2.38
VPS26A-208ENST00000497022 MAP1AP78559 2803 aaPredicted RBP0.19□□□□□ -2.38
VPS26A-208ENST00000497022 NCOR1O75376 2440 aa0.19□□□□□ -2.38
VPS26A-208ENST00000497022 EEA1Q15075 1411 aa0.19□□□□□ -2.38
VPS26A-208ENST00000497022 CMYA5Q8N3K9 4069 aa0.19□□□□□ -2.38
VPS26A-208ENST00000497022 TRRAPQ9Y4A5 3859 aa0.18□□□□□ -2.38
VPS26A-208ENST00000497022 MAP1BP46821 2468 aaKnown RBP0.18□□□□□ -2.38
VPS26A-208ENST00000497022 PIGYQ3MUY2 71 aa0.18□□□□□ -2.38
VPS26A-208ENST00000497022 WFDC13Q8IUB5 93 aa0.18□□□□□ -2.38
VPS26A-208ENST00000497022 PKDREJQ9NTG1 2253 aa0.18□□□□□ -2.38
VPS26A-208ENST00000497022 TACC2O95359 2948 aa0.18□□□□□ -2.38
VPS26A-208ENST00000497022 CDC42BPAQ5VT25 1732 aa0.18□□□□□ -2.38
VPS26A-208ENST00000497022 EFCAB6Q5THR3 1501 aa0.18□□□□□ -2.38
VPS26A-208ENST00000497022 AKAP6Q13023 2319 aa0.18□□□□□ -2.38
VPS26A-208ENST00000497022 DEPDC5O75140 1603 aa0.17□□□□□ -2.38
VPS26A-208ENST00000497022 ZZEF1O43149 2961 aa0.17□□□□□ -2.38
VPS26A-208ENST00000497022 I3L3M4 83 aa0.17□□□□□ -2.38
VPS26A-208ENST00000497022 M0R1W7 72 aa0.17□□□□□ -2.38
VPS26A-208ENST00000497022 IGSF10Q6WRI0 2623 aa0.17□□□□□ -2.38
VPS26A-208ENST00000497022 CDKN2A-AS1Q9UH64 79 aa0.17□□□□□ -2.38
VPS26A-208ENST00000497022 LMO7Q8WWI1 1683 aa0.17□□□□□ -2.38
VPS26A-208ENST00000497022 ABCA2Q9BZC7 2435 aa0.16□□□□□ -2.38
VPS26A-208ENST00000497022 KALRNO60229 2985 aa0.16□□□□□ -2.38
VPS26A-208ENST00000497022 GCN1Q92616 2671 aaKnown RBP0.16□□□□□ -2.38
VPS26A-208ENST00000497022 STARD9Q9P2P6 4700 aa0.16□□□□□ -2.38
VPS26A-208ENST00000497022 KMT2CQ8NEZ4 4911 aaKnown RBP0.16□□□□□ -2.38
VPS26A-208ENST00000497022 DEFB131BA0A096LNP1 70 aa0.16□□□□□ -2.38
VPS26A-208ENST00000497022 ETDCA0A1B0GVM5 59 aa0.16□□□□□ -2.38
VPS26A-208ENST00000497022 RPS27P42677 84 aaKnown RBP0.16□□□□□ -2.38
VPS26A-208ENST00000497022 RPS27LQ71UM5 84 aaKnown RBP0.16□□□□□ -2.38
VPS26A-208ENST00000497022 U3KQA8 63 aa0.16□□□□□ -2.38
VPS26A-208ENST00000497022 NF1P21359 2839 aa0.16□□□□□ -2.38
VPS26A-208ENST00000497022 SPTA1P02549 2419 aa0.16□□□□□ -2.38
VPS26A-208ENST00000497022 HIVEP3Q5T1R4 2406 aa0.16□□□□□ -2.38
VPS26A-208ENST00000497022 NCOR2Q9Y618 2525 aa0.16□□□□□ -2.38
VPS26A-208ENST00000497022 TENM2Q9NT68 2774 aa0.16□□□□□ -2.38
VPS26A-208ENST00000497022 LAMA5O15230 3695 aa0.16□□□□□ -2.38
VPS26A-208ENST00000497022 SPTBN5Q9NRC6 3674 aaKnown RBP0.16□□□□□ -2.38
VPS26A-208ENST00000497022 HIVEP1P15822 2718 aa0.15□□□□□ -2.38
VPS26A-208ENST00000497022 RANBP2P49792 3224 aaKnown RBP0.15□□□□□ -2.38
VPS26A-208ENST00000497022 STAB1Q9NY15 2570 aa0.15□□□□□ -2.38
VPS26A-208ENST00000497022 DNHD1Q96M86 4753 aa0.15□□□□□ -2.39
VPS26A-208ENST00000497022 DMXL1Q9Y485 3027 aa0.15□□□□□ -2.39
VPS26A-208ENST00000497022 KIAA0586Q9BVV6 1533 aa0.15□□□□□ -2.39
VPS26A-208ENST00000497022 LYNX1G3V0Z9 82 aa0.15□□□□□ -2.39
VPS26A-208ENST00000497022 DEFB130BP0DP73 79 aa0.15□□□□□ -2.39
VPS26A-208ENST00000497022 DEFB130AP0DP74 79 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms