RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 C3orf84H3BNL1 204 aa4.1□□□□□ -1.75
SSBP1-213ENST00000496622 C9orf116Q5BN46 136 aaPredicted RBP4.1□□□□□ -1.75
SSBP1-213ENST00000496622 CHCHD10Q8WYQ3 142 aaPredicted RBP4.1□□□□□ -1.75
SSBP1-213ENST00000496622 A0A1B0GUV1 79 aa4.09□□□□□ -1.75
SSBP1-213ENST00000496622 TMEM254Q8TBM7 123 aa4.09□□□□□ -1.75
SSBP1-213ENST00000496622 DNAH10Q8IVF4 4471 aa4.09□□□□□ -1.76
SSBP1-213ENST00000496622 TRBV10-3A0A0K0K1G6 114 aa4.08□□□□□ -1.76
SSBP1-213ENST00000496622 LELP1Q5T871 98 aa4.08□□□□□ -1.76
SSBP1-213ENST00000496622 NDUFA1O15239 70 aa4.08□□□□□ -1.76
SSBP1-213ENST00000496622 COX7B2Q8TF08 81 aa4.08□□□□□ -1.76
SSBP1-213ENST00000496622 C9orf129Q5T035 196 aaKnown RBP4.08□□□□□ -1.76
SSBP1-213ENST00000496622 MIR7-3HGQ8N6C7 128 aa4.08□□□□□ -1.76
SSBP1-213ENST00000496622 C1orf64Q8NEQ6 169 aa4.08□□□□□ -1.76
SSBP1-213ENST00000496622 LINC00158P58513 81 aa4.07□□□□□ -1.76
SSBP1-213ENST00000496622 C10orf25Q5T742 122 aa4.07□□□□□ -1.76
SSBP1-213ENST00000496622 MOBPQ13875 183 aa4.07□□□□□ -1.76
SSBP1-213ENST00000496622 MIAQ16674 131 aa4.07□□□□□ -1.76
SSBP1-213ENST00000496622 LINC00308Q8TCZ7 52 aa4.07□□□□□ -1.76
SSBP1-213ENST00000496622 HIGD2BQ4VC39 106 aa4.06□□□□□ -1.76
SSBP1-213ENST00000496622 SCXQ7RTU7 201 aa4.06□□□□□ -1.76
SSBP1-213ENST00000496622 LINC00476Q8WZB0 136 aa4.06□□□□□ -1.76
SSBP1-213ENST00000496622 RETNLBQ9BQ08 111 aa4.06□□□□□ -1.76
SSBP1-213ENST00000496622 PSCAO43653 123 aa4.06□□□□□ -1.76
SSBP1-213ENST00000496622 UNQ6190/PRO20217Q6UXQ8 127 aa4.06□□□□□ -1.76
SSBP1-213ENST00000496622 SND1-IT1Q9HBX3 110 aa4.06□□□□□ -1.76
SSBP1-213ENST00000496622 FAM218AQ96MZ4 157 aa4.05□□□□□ -1.76
SSBP1-213ENST00000496622 PLECQ15149 4684 aaKnown RBP4.05□□□□□ -1.76
SSBP1-213ENST00000496622 A6NED7 52 aa4.05□□□□□ -1.76
SSBP1-213ENST00000496622 CRPP02741 224 aa4.05□□□□□ -1.76
SSBP1-213ENST00000496622 CASC10Q5T4H9 136 aa4.05□□□□□ -1.76
SSBP1-213ENST00000496622 ADM2Q7Z4H4 148 aa4.05□□□□□ -1.76
SSBP1-213ENST00000496622 PRR34Q9NV39 138 aa4.05□□□□□ -1.76
SSBP1-213ENST00000496622 LECT2O14960 151 aa4.04□□□□□ -1.76
SSBP1-213ENST00000496622 KRTAP5-3Q6L8H2 238 aa4.04□□□□□ -1.76
SSBP1-213ENST00000496622 OBSCN-AS1Q96MR7 158 aa4.04□□□□□ -1.76
SSBP1-213ENST00000496622 KRTAP9-8Q9BYQ0 159 aa4.04□□□□□ -1.76
SSBP1-213ENST00000496622 CDC42SE1Q9NRR8 79 aa4.04□□□□□ -1.76
SSBP1-213ENST00000496622 STARD9Q9P2P6 4700 aa4.04□□□□□ -1.76
SSBP1-213ENST00000496622 IGKV2D-24A0A075B6R9 120 aa4.04□□□□□ -1.76
SSBP1-213ENST00000496622 NREPQ16612 68 aa4.04□□□□□ -1.76
SSBP1-213ENST00000496622 Q8NDZ9 215 aa4.04□□□□□ -1.76
SSBP1-213ENST00000496622 ERC2-IT1O76042 136 aa4.03□□□□□ -1.76
SSBP1-213ENST00000496622 CCL18P55774 89 aa4.03□□□□□ -1.76
SSBP1-213ENST00000496622 IGKV2-28A0A075B6P5 120 aa4.03□□□□□ -1.76
SSBP1-213ENST00000496622 IGKV2D-28P01615 120 aa4.03□□□□□ -1.76
SSBP1-213ENST00000496622 XAGE1AQ9HD64 81 aa4.03□□□□□ -1.76
SSBP1-213ENST00000496622 KMT2AQ03164 3969 aa4.02□□□□□ -1.77
SSBP1-213ENST00000496622 H3BNG1 76 aa4.02□□□□□ -1.77
SSBP1-213ENST00000496622 SPAG11BQ08648 103 aa4.02□□□□□ -1.77
SSBP1-213ENST00000496622 PRR15LQ9BU68 103 aa4.02□□□□□ -1.77
SSBP1-213ENST00000496622 NCR3O14931 201 aa4.02□□□□□ -1.77
SSBP1-213ENST00000496622 Q8IZM0 81 aa4.02□□□□□ -1.77
SSBP1-213ENST00000496622 CYP4F30PQ9H0H9 118 aa4.02□□□□□ -1.77
SSBP1-213ENST00000496622 KRTAP26-1Q6PEX3 210 aa4.01□□□□□ -1.77
SSBP1-213ENST00000496622 KRTAP1-5Q9BYS1 174 aa4.01□□□□□ -1.77
SSBP1-213ENST00000496622 UBL5Q9BZL1 73 aa4.01□□□□□ -1.77
SSBP1-213ENST00000496622 LINC01556Q5JQF7 62 aa4□□□□□ -1.77
SSBP1-213ENST00000496622 B9D2Q9BPU9 175 aa4□□□□□ -1.77
SSBP1-213ENST00000496622 Q8N814 137 aa4□□□□□ -1.77
SSBP1-213ENST00000496622 C15orf56Q8N910 161 aa4□□□□□ -1.77
SSBP1-213ENST00000496622 LIMD2Q9BT23 127 aa4□□□□□ -1.77
SSBP1-213ENST00000496622 HIGD2AQ9BW72 106 aa4□□□□□ -1.77
SSBP1-213ENST00000496622 C6orf48Q9UBA6 75 aa4□□□□□ -1.77
SSBP1-213ENST00000496622 SRRM2Q9UQ35 2752 aaKnown RBP3.99□□□□□ -1.77
SSBP1-213ENST00000496622 DNAH10OSP0CZ25 163 aa3.98□□□□□ -1.77
SSBP1-213ENST00000496622 C1orf134Q5TEV5 83 aa3.98□□□□□ -1.77
SSBP1-213ENST00000496622 CAMK2N2Q96S95 79 aa3.98□□□□□ -1.77
SSBP1-213ENST00000496622 LINC01547P58512 204 aaPredicted RBP3.98□□□□□ -1.77
SSBP1-213ENST00000496622 Q8N9P0 234 aaPredicted RBP3.98□□□□□ -1.77
SSBP1-213ENST00000496622 SMIM11BQ8TCY0 68 aa3.98□□□□□ -1.77
SSBP1-213ENST00000496622 M0R2N4 97 aa3.97□□□□□ -1.77
SSBP1-213ENST00000496622 REG3GQ6UW15 175 aa3.97□□□□□ -1.77
SSBP1-213ENST00000496622 BPY2O14599 106 aa3.97□□□□□ -1.77
SSBP1-213ENST00000496622 HAMPP81172 84 aa3.97□□□□□ -1.77
SSBP1-213ENST00000496622 CASC2Q6XLA1 102 aa3.96□□□□□ -1.78
SSBP1-213ENST00000496622 UBE2DNLQ8IWF7 75 aa3.96□□□□□ -1.78
SSBP1-213ENST00000496622 APLNQ9ULZ1 77 aa3.96□□□□□ -1.78
SSBP1-213ENST00000496622 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.95□□□□□ -1.78
SSBP1-213ENST00000496622 A0A087WYN8 130 aa3.95□□□□□ -1.78
SSBP1-213ENST00000496622 VPS13DQ5THJ4 4388 aa3.95□□□□□ -1.78
SSBP1-213ENST00000496622 SACSQ9NZJ4 4579 aa3.95□□□□□ -1.78
SSBP1-213ENST00000496622 FAM168BA1KXE4 195 aa3.94□□□□□ -1.78
SSBP1-213ENST00000496622 PRR4Q16378 134 aa3.94□□□□□ -1.78
SSBP1-213ENST00000496622 ABCA13Q86UQ4 5058 aa3.94□□□□□ -1.78
SSBP1-213ENST00000496622 COX17Q14061 63 aa3.93□□□□□ -1.78
SSBP1-213ENST00000496622 DNAH2Q9P225 4427 aa3.93□□□□□ -1.78
SSBP1-213ENST00000496622 LOC101927531A0A1B0GV80 90 aa3.93□□□□□ -1.78
SSBP1-213ENST00000496622 OCR1Q9BZK8 76 aa3.93□□□□□ -1.78
SSBP1-213ENST00000496622 ROMO1P60602 79 aa3.92□□□□□ -1.78
SSBP1-213ENST00000496622 ORMDL1Q9P0S3 153 aa3.92□□□□□ -1.78
SSBP1-213ENST00000496622 GVQW2A0A096LPI5 108 aaPredicted RBP3.92□□□□□ -1.78
SSBP1-213ENST00000496622 IGKV2-24A0A0C4DH68 120 aa3.91□□□□□ -1.78
SSBP1-213ENST00000496622 NOTCH2NLQ7Z3S9 236 aa3.91□□□□□ -1.78
SSBP1-213ENST00000496622 RPL37AP8A6NKH3 93 aa3.91□□□□□ -1.78
SSBP1-213ENST00000496622 KRTAP16-1A8MUX0 517 aa3.91□□□□□ -1.78
SSBP1-213ENST00000496622 JMJD7-PLA2G4BH0Y9G9 81 aa3.91□□□□□ -1.78
SSBP1-213ENST00000496622 CSAG1Q6PB30 78 aa3.91□□□□□ -1.78
SSBP1-213ENST00000496622 KRTAP7-1Q8IUC3 87 aa3.91□□□□□ -1.78
SSBP1-213ENST00000496622 CDK2AP2O75956 126 aa3.9□□□□□ -1.79
SSBP1-213ENST00000496622 CHTF8P0CG12 524 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms