RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	PCOTH	Q58A44	107 aa		4.31	□□□□□ -1.72
NVL-223	ENST00000496393	GAGE2A	Q6NT46	116 aa		4.31	□□□□□ -1.72
NVL-223	ENST00000496393	SMCR5	Q8TEV8	140 aa		4.31	□□□□□ -1.72
NVL-223	ENST00000496393		A0A0U1RRA0	63 aa		4.3	□□□□□ -1.72
NVL-223	ENST00000496393		M0R2T5	61 aa		4.3	□□□□□ -1.72
NVL-223	ENST00000496393	LGALS3	P17931	250 aa	Known RBP	4.3	□□□□□ -1.72
NVL-223	ENST00000496393	TTTY13	Q9BZ97	58 aa		4.3	□□□□□ -1.72
NVL-223	ENST00000496393	TRBV20-1	A0A075B6N2	111 aa		4.29	□□□□□ -1.72
NVL-223	ENST00000496393	IGLV5-39	A0A0G2JS06	123 aa		4.29	□□□□□ -1.72
NVL-223	ENST00000496393		J3QQQ9	107 aa		4.29	□□□□□ -1.72
NVL-223	ENST00000496393	NCR3	O14931	201 aa		4.29	□□□□□ -1.72
NVL-223	ENST00000496393	TMEM170B	Q5T4T1	132 aa		4.29	□□□□□ -1.72
NVL-223	ENST00000496393	ETDC	A0A1B0GVM5	59 aa		4.28	□□□□□ -1.72
NVL-223	ENST00000496393	TMEM223	A0PJW6	202 aa		4.28	□□□□□ -1.72
NVL-223	ENST00000496393	PRY	O14603	147 aa		4.28	□□□□□ -1.72
NVL-223	ENST00000496393	SLC25A20	O43772	301 aa		4.28	□□□□□ -1.72
NVL-223	ENST00000496393	ZNF22	P17026	224 aa	Predicted RBP	4.28	□□□□□ -1.72
NVL-223	ENST00000496393	LINC00483	Q53H64	154 aa		4.28	□□□□□ -1.72
NVL-223	ENST00000496393	NAA38	Q9BRA0	125 aa	Known RBP	4.28	□□□□□ -1.72
NVL-223	ENST00000496393	KRTAP23-1	A1A580	65 aa		4.27	□□□□□ -1.73
NVL-223	ENST00000496393	C9orf92	A6NGG3	77 aa		4.27	□□□□□ -1.73
NVL-223	ENST00000496393		K7ERJ3	54 aa		4.27	□□□□□ -1.73
NVL-223	ENST00000496393	ERC2-IT1	O76042	136 aa		4.27	□□□□□ -1.73
NVL-223	ENST00000496393	SCGB1A1	P11684	91 aa		4.27	□□□□□ -1.73
NVL-223	ENST00000496393	LINC00158	P58513	81 aa		4.27	□□□□□ -1.73
NVL-223	ENST00000496393	COX17	Q14061	63 aa		4.27	□□□□□ -1.73
NVL-223	ENST00000496393		A0A0B4J2C4	111 aa		4.26	□□□□□ -1.73
NVL-223	ENST00000496393		H3BMG7	143 aa		4.26	□□□□□ -1.73
NVL-223	ENST00000496393	RPS29	P62273	56 aa	Known RBP	4.26	□□□□□ -1.73
NVL-223	ENST00000496393	C9orf153	Q5TBE3	101 aa		4.26	□□□□□ -1.73
NVL-223	ENST00000496393	COPS9	Q8WXC6	57 aa		4.26	□□□□□ -1.73
NVL-223	ENST00000496393	PRO1854	Q9UHT4	67 aa		4.26	□□□□□ -1.73
NVL-223	ENST00000496393	TRBV10-3	A0A0K0K1G6	114 aa		4.25	□□□□□ -1.73
NVL-223	ENST00000496393	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.25	□□□□□ -1.73
NVL-223	ENST00000496393	TIMM17B	O60830	172 aa		4.25	□□□□□ -1.73
NVL-223	ENST00000496393	SPRR1A	P35321	89 aa		4.25	□□□□□ -1.73
NVL-223	ENST00000496393	FLG	P20930	4061 aa	Predicted RBP	4.24	□□□□□ -1.73
NVL-223	ENST00000496393	LOC107984156	A0A0G2JMH3	177 aa		4.24	□□□□□ -1.73
NVL-223	ENST00000496393		A0A0J9YXY3	114 aa		4.24	□□□□□ -1.73
NVL-223	ENST00000496393	CFC1	P0CG37	223 aa		4.24	□□□□□ -1.73
NVL-223	ENST00000496393	SCGB1C2	P0DMR2	95 aa		4.24	□□□□□ -1.73
NVL-223	ENST00000496393	IFITM1	P13164	125 aa		4.24	□□□□□ -1.73
NVL-223	ENST00000496393	PSMB2	P49721	201 aa		4.24	□□□□□ -1.73
NVL-223	ENST00000496393	COX6B2	Q6YFQ2	88 aa		4.24	□□□□□ -1.73
NVL-223	ENST00000496393	SSBP3-AS1	Q7Z2R9	100 aa		4.24	□□□□□ -1.73
NVL-223	ENST00000496393	ARL17A	Q8IVW1	177 aa		4.24	□□□□□ -1.73
NVL-223	ENST00000496393	SIGMAR1	Q99720	223 aa		4.24	□□□□□ -1.73
NVL-223	ENST00000496393	SPANXD	Q9BXN6	97 aa		4.24	□□□□□ -1.73
NVL-223	ENST00000496393	KCNQ1DN	Q9H478	68 aa		4.24	□□□□□ -1.73
NVL-223	ENST00000496393	SPANXC	Q9NY87	97 aa		4.24	□□□□□ -1.73
NVL-223	ENST00000496393	PRO0461	Q9UI25	63 aa		4.24	□□□□□ -1.73
NVL-223	ENST00000496393		B5MCH6	92 aa		4.23	□□□□□ -1.73
NVL-223	ENST00000496393	PPDPFL	Q8WWR9	84 aa		4.23	□□□□□ -1.73
NVL-223	ENST00000496393	SSPO	A2VEC9	5147 aa		4.22	□□□□□ -1.73
NVL-223	ENST00000496393		A4D1N5	150 aa		4.22	□□□□□ -1.73
NVL-223	ENST00000496393	COX6C	P09669	75 aa		4.22	□□□□□ -1.73
NVL-223	ENST00000496393	TSPEAR-AS2	P59090	65 aa		4.22	□□□□□ -1.73
NVL-223	ENST00000496393	ATXN8	Q156A1	80 aa		4.22	□□□□□ -1.73
NVL-223	ENST00000496393	ETDB	Q3ZM63	59 aa		4.22	□□□□□ -1.73
NVL-223	ENST00000496393	MEIG1	Q5JSS6	88 aa		4.22	□□□□□ -1.73
NVL-223	ENST00000496393	HRCT1	Q6UXD1	115 aa		4.22	□□□□□ -1.73
NVL-223	ENST00000496393	TEN1	Q86WV5	123 aa		4.22	□□□□□ -1.73
NVL-223	ENST00000496393	MUSTN1	Q8IVN3	82 aa		4.22	□□□□□ -1.73
NVL-223	ENST00000496393	MIR7-3HG	Q8N6C7	128 aa		4.22	□□□□□ -1.73
NVL-223	ENST00000496393		Q9BRP9	147 aa		4.22	□□□□□ -1.73
NVL-223	ENST00000496393	C21orf62-AS1	Q17RA5	79 aa		4.21	□□□□□ -1.74
NVL-223	ENST00000496393	SFTA2	Q6UW10	78 aa		4.21	□□□□□ -1.74
NVL-223	ENST00000496393	MTURN	Q8N3F0	131 aa		4.21	□□□□□ -1.74
NVL-223	ENST00000496393	TCL1B	O95988	128 aa		4.2	□□□□□ -1.74
NVL-223	ENST00000496393	HERV-K104	P63124	156 aa		4.2	□□□□□ -1.74
NVL-223	ENST00000496393		Q1RN00	199 aa		4.2	□□□□□ -1.74
NVL-223	ENST00000496393	ST20-AS1	Q8NBB2	130 aa		4.2	□□□□□ -1.74
NVL-223	ENST00000496393	USH2A	O75445	5202 aa		4.2	□□□□□ -1.74
NVL-223	ENST00000496393	IGLV6-57	P01721	117 aa		4.19	□□□□□ -1.74
NVL-223	ENST00000496393		Q6ZRX8	168 aa		4.19	□□□□□ -1.74
NVL-223	ENST00000496393	TRBV10-2	A0A0K0K1G8	114 aa		4.18	□□□□□ -1.74
NVL-223	ENST00000496393		H3BT86	120 aa		4.18	□□□□□ -1.74
NVL-223	ENST00000496393	LITAF	Q99732	161 aa		4.18	□□□□□ -1.74
NVL-223	ENST00000496393	LIMD2	Q9BT23	127 aa		4.18	□□□□□ -1.74
NVL-223	ENST00000496393		C9JAW5	83 aa		4.17	□□□□□ -1.74
NVL-223	ENST00000496393	ANKRD29	Q8N6D5	301 aa		4.17	□□□□□ -1.74
NVL-223	ENST00000496393		A0A1B0GV72	72 aa		4.16	□□□□□ -1.74
NVL-223	ENST00000496393		H7C2G1	150 aa		4.16	□□□□□ -1.74
NVL-223	ENST00000496393	RPL37	P61927	97 aa	Known RBP	4.15	□□□□□ -1.75
NVL-223	ENST00000496393	ADAMTSL4-AS1	Q5T5F5	129 aa		4.15	□□□□□ -1.75
NVL-223	ENST00000496393		Q6Q795	121 aa		4.15	□□□□□ -1.75
NVL-223	ENST00000496393	LINC00308	Q8TCZ7	52 aa		4.15	□□□□□ -1.75
NVL-223	ENST00000496393	TRAV23DV6	A0A075B6W5	121 aa		4.14	□□□□□ -1.75
NVL-223	ENST00000496393	LST1	O00453	97 aa		4.14	□□□□□ -1.75
NVL-223	ENST00000496393	TRIAP1	O43715	76 aa		4.14	□□□□□ -1.75
NVL-223	ENST00000496393	S100A7L2	Q5SY68	101 aa		4.14	□□□□□ -1.75
NVL-223	ENST00000496393	TRAV13-2	A0A0B4J235	113 aa		4.13	□□□□□ -1.75
NVL-223	ENST00000496393	ACYP1	P07311	99 aa		4.13	□□□□□ -1.75
NVL-223	ENST00000496393	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.12	□□□□□ -1.75
NVL-223	ENST00000496393	FAM240A	A0A1B0GVK7	77 aa		4.12	□□□□□ -1.75
NVL-223	ENST00000496393	ZNF73	O43830	326 aa	Predicted RBP	4.12	□□□□□ -1.75
NVL-223	ENST00000496393	TRAC	P01848	142 aa		4.12	□□□□□ -1.75
NVL-223	ENST00000496393	NPC2	P61916	151 aa		4.12	□□□□□ -1.75
NVL-223	ENST00000496393		H0YGX0	51 aa		4.11	□□□□□ -1.75
NVL-223	ENST00000496393	SNCG	O76070	127 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms