RNA–Protein interactions for RNA: ENST00000496363.5

USF1-207, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 990 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-207ENST00000496363 F8WEM9 126 aa6.84□□□□□ -1.31
USF1-207ENST00000496363 LINC00575Q6W349 94 aa6.82□□□□□ -1.32
USF1-207ENST00000496363 TRBV7-7A0A0K0K1E9 115 aa6.81□□□□□ -1.32
USF1-207ENST00000496363 IGFL1Q6UW32 110 aa6.81□□□□□ -1.32
USF1-207ENST00000496363 Q6ZQY7 126 aa6.81□□□□□ -1.32
USF1-207ENST00000496363 OBSCN-AS1Q96MR7 158 aa6.8□□□□□ -1.32
USF1-207ENST00000496363 hADV29S1A0JD25 119 aa6.79□□□□□ -1.32
USF1-207ENST00000496363 VAMP3Q15836 100 aa6.79□□□□□ -1.32
USF1-207ENST00000496363 Q6Q795 121 aa6.79□□□□□ -1.32
USF1-207ENST00000496363 CLEC2BQ92478 149 aa6.79□□□□□ -1.32
USF1-207ENST00000496363 Q6JHZ5 121 aa6.78□□□□□ -1.32
USF1-207ENST00000496363 OCIAD2Q56VL3 154 aa6.77□□□□□ -1.33
USF1-207ENST00000496363 Q75L30 129 aa6.76□□□□□ -1.33
USF1-207ENST00000496363 SNRPEP62304 92 aaKnown RBP6.75□□□□□ -1.33
USF1-207ENST00000496363 ATP11AUNQ6ZP68 121 aa6.75□□□□□ -1.33
USF1-207ENST00000496363 H3BUT2 72 aa6.74□□□□□ -1.33
USF1-207ENST00000496363 C12orf57Q99622 126 aa6.74□□□□□ -1.33
USF1-207ENST00000496363 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.73□□□□□ -1.33
USF1-207ENST00000496363 LST1O00453 97 aa6.71□□□□□ -1.34
USF1-207ENST00000496363 Q96NJ1 140 aa6.71□□□□□ -1.34
USF1-207ENST00000496363 HIST3H2BBQ8N257 126 aa6.7□□□□□ -1.34
USF1-207ENST00000496363 HIST1H2BLQ99880 126 aa6.7□□□□□ -1.34
USF1-207ENST00000496363 SNHG12Q9BXW3 62 aa6.7□□□□□ -1.34
USF1-207ENST00000496363 SSPOA2VEC9 5147 aa6.69□□□□□ -1.34
USF1-207ENST00000496363 USH2AO75445 5202 aa6.69□□□□□ -1.34
USF1-207ENST00000496363 HSBP1L1C9JCN9 74 aa6.69□□□□□ -1.34
USF1-207ENST00000496363 PPDPFLQ8WWR9 84 aa6.69□□□□□ -1.34
USF1-207ENST00000496363 BVES-AS1Q5T3Y7 98 aa6.68□□□□□ -1.34
USF1-207ENST00000496363 S100A2P29034 98 aa6.66□□□□□ -1.34
USF1-207ENST00000496363 C20orf166-AS1Q96NR2 134 aa6.66□□□□□ -1.34
USF1-207ENST00000496363 HIST1H4GQ99525 98 aa6.66□□□□□ -1.34
USF1-207ENST00000496363 A8MUU9 505 aa6.65□□□□□ -1.34
USF1-207ENST00000496363 SCGB1D1O95968 90 aa6.65□□□□□ -1.34
USF1-207ENST00000496363 KRTAP9-8Q9BYQ0 159 aa6.65□□□□□ -1.34
USF1-207ENST00000496363 SS18L2Q9UHA2 77 aa6.64□□□□□ -1.35
USF1-207ENST00000496363 FAM218AQ96MZ4 157 aa6.63□□□□□ -1.35
USF1-207ENST00000496363 A0A087WSZ3 146 aa6.62□□□□□ -1.35
USF1-207ENST00000496363 DSCR10P59022 87 aa6.62□□□□□ -1.35
USF1-207ENST00000496363 CFC1P0CG37 223 aa6.61□□□□□ -1.35
USF1-207ENST00000496363 NDUFV3P56181 108 aaKnown RBP6.61□□□□□ -1.35
USF1-207ENST00000496363 TEN1Q86WV5 123 aa6.61□□□□□ -1.35
USF1-207ENST00000496363 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.6□□□□□ -1.35
USF1-207ENST00000496363 COX8AP10176 69 aa6.6□□□□□ -1.35
USF1-207ENST00000496363 TRBV20-1A0A075B6N2 111 aa6.59□□□□□ -1.35
USF1-207ENST00000496363 RAB37Q96AX2 223 aa6.59□□□□□ -1.35
USF1-207ENST00000496363 KRTAP16-1A8MUX0 517 aa6.58□□□□□ -1.36
USF1-207ENST00000496363 KRTAP9-7A8MTY7 169 aa6.57□□□□□ -1.36
USF1-207ENST00000496363 H3BMG7 143 aa6.57□□□□□ -1.36
USF1-207ENST00000496363 SIGMAR1Q99720 223 aa6.57□□□□□ -1.36
USF1-207ENST00000496363 H0YGX0 51 aa6.56□□□□□ -1.36
USF1-207ENST00000496363 DLEU1O43261 78 aa6.56□□□□□ -1.36
USF1-207ENST00000496363 S100A6P06703 90 aa6.56□□□□□ -1.36
USF1-207ENST00000496363 A0A0B4J2C4 111 aa6.55□□□□□ -1.36
USF1-207ENST00000496363 A0A1W2PNM2 257 aa6.55□□□□□ -1.36
USF1-207ENST00000496363 SNCGO76070 127 aa6.55□□□□□ -1.36
USF1-207ENST00000496363 MT2AP02795 61 aa6.55□□□□□ -1.36
USF1-207ENST00000496363 FABP2P12104 132 aa6.55□□□□□ -1.36
USF1-207ENST00000496363 C14orf144Q96I85 54 aa6.55□□□□□ -1.36
USF1-207ENST00000496363 FAM236DA0A1B0GTK5 79 aa6.53□□□□□ -1.36
USF1-207ENST00000496363 FAM236CP0DP71 79 aa6.53□□□□□ -1.36
USF1-207ENST00000496363 FCGBPQ9Y6R7 5405 aaPredicted RBP6.53□□□□□ -1.36
USF1-207ENST00000496363 A0A1B0GV72 72 aa6.52□□□□□ -1.37
USF1-207ENST00000496363 C2orf91Q6ZV80 131 aa6.52□□□□□ -1.37
USF1-207ENST00000496363 NOTCH2NLQ7Z3S9 236 aa6.52□□□□□ -1.37
USF1-207ENST00000496363 HIGD1BQ9P298 99 aa6.52□□□□□ -1.37
USF1-207ENST00000496363 MT1FP04733 61 aa6.51□□□□□ -1.37
USF1-207ENST00000496363 IGKV4-1P06312 121 aa6.51□□□□□ -1.37
USF1-207ENST00000496363 LINC00313P59037 77 aa6.51□□□□□ -1.37
USF1-207ENST00000496363 PAM16Q9Y3D7 125 aa6.51□□□□□ -1.37
USF1-207ENST00000496363 HRES1P13985 223 aa6.5□□□□□ -1.37
USF1-207ENST00000496363 SPATA45Q537H7 98 aa6.5□□□□□ -1.37
USF1-207ENST00000496363 A0A1B0GX51 115 aa6.49□□□□□ -1.37
USF1-207ENST00000496363 DEFB116Q30KQ4 102 aa6.49□□□□□ -1.37
USF1-207ENST00000496363 PRO1854Q9UHT4 67 aa6.49□□□□□ -1.37
USF1-207ENST00000496363 LCE2BO14633 110 aa6.48□□□□□ -1.37
USF1-207ENST00000496363 TRIAP1O43715 76 aa6.48□□□□□ -1.37
USF1-207ENST00000496363 CEND1Q8N111 149 aa6.48□□□□□ -1.37
USF1-207ENST00000496363 MPLKIPQ8TAP9 179 aa6.48□□□□□ -1.37
USF1-207ENST00000496363 GHRHP01286 108 aa6.47□□□□□ -1.37
USF1-207ENST00000496363 FXYD2P54710 66 aa6.47□□□□□ -1.37
USF1-207ENST00000496363 ANKRD29Q8N6D5 301 aa6.47□□□□□ -1.37
USF1-207ENST00000496363 TRBV7-4A0A0J9YYF1 115 aa6.46□□□□□ -1.38
USF1-207ENST00000496363 KRTAP19-1Q8IUB9 90 aa6.46□□□□□ -1.38
USF1-207ENST00000496363 RBM12B-AS1Q9P1G2 102 aa6.46□□□□□ -1.38
USF1-207ENST00000496363 VAMP8Q9BV40 100 aa6.45□□□□□ -1.38
USF1-207ENST00000496363 KRTAP9-3Q9BYQ3 159 aa6.45□□□□□ -1.38
USF1-207ENST00000496363 LINC00472Q9H8W2 130 aa6.45□□□□□ -1.38
USF1-207ENST00000496363 IGHV6-1A0A0B4J1U7 121 aa6.44□□□□□ -1.38
USF1-207ENST00000496363 KRTAP10-10P60014 251 aa6.44□□□□□ -1.38
USF1-207ENST00000496363 TMEM238LA0A1B0GVL6 79 aa6.43□□□□□ -1.38
USF1-207ENST00000496363 A6NJY4 79 aa6.43□□□□□ -1.38
USF1-207ENST00000496363 ORMDL1Q9P0S3 153 aa6.43□□□□□ -1.38
USF1-207ENST00000496363 DNAL4O96015 105 aa6.42□□□□□ -1.38
USF1-207ENST00000496363 K7ERJ3 54 aa6.41□□□□□ -1.38
USF1-207ENST00000496363 CCKP06307 115 aa6.41□□□□□ -1.38
USF1-207ENST00000496363 S100A1P23297 94 aa6.41□□□□□ -1.38
USF1-207ENST00000496363 MACF1Q9UPN3 7388 aaKnown RBP6.4□□□□□ -1.38
USF1-207ENST00000496363 TRACP01848 142 aa6.4□□□□□ -1.38
USF1-207ENST00000496363 PSMB2P49721 201 aa6.39□□□□□ -1.39
USF1-207ENST00000496363 SYNE2Q8WXH0 6885 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms