RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 KRTAP11-1Q8IUC1 163 aa5.54□□□□□ -1.52
SMARCAL1-213ENST00000496037 TIMM17AQ99595 171 aa5.54□□□□□ -1.52
SMARCAL1-213ENST00000496037 SMIM2Q9BVW6 85 aa5.54□□□□□ -1.52
SMARCAL1-213ENST00000496037 IGLV4-69A0A075B6H9 119 aa5.53□□□□□ -1.52
SMARCAL1-213ENST00000496037 H3BT86 120 aa5.53□□□□□ -1.52
SMARCAL1-213ENST00000496037 TMEM170BQ5T4T1 132 aa5.53□□□□□ -1.52
SMARCAL1-213ENST00000496037 TMEM101Q96IK0 257 aa5.53□□□□□ -1.52
SMARCAL1-213ENST00000496037 KRTAP4-16G5E9R7 235 aaPredicted RBP5.52□□□□□ -1.53
SMARCAL1-213ENST00000496037 J3KT08 172 aa5.52□□□□□ -1.53
SMARCAL1-213ENST00000496037 ACYP1P07311 99 aa5.52□□□□□ -1.53
SMARCAL1-213ENST00000496037 CFC1P0CG37 223 aa5.52□□□□□ -1.53
SMARCAL1-213ENST00000496037 LINC00304Q8N9R0 145 aa5.52□□□□□ -1.53
SMARCAL1-213ENST00000496037 CAMK2N2Q96S95 79 aa5.52□□□□□ -1.53
SMARCAL1-213ENST00000496037 A0A0J9YXY3 114 aa5.51□□□□□ -1.53
SMARCAL1-213ENST00000496037 ZNF861PO60384 105 aa5.51□□□□□ -1.53
SMARCAL1-213ENST00000496037 RPS28P62857 69 aaKnown RBP5.51□□□□□ -1.53
SMARCAL1-213ENST00000496037 CAMK2N1Q7Z7J9 78 aa5.51□□□□□ -1.53
SMARCAL1-213ENST00000496037 PLEKHB2Q96CS7 222 aa5.51□□□□□ -1.53
SMARCAL1-213ENST00000496037 TRBV30A0A0K0K1B3 111 aa5.5□□□□□ -1.53
SMARCAL1-213ENST00000496037 C11orf86A6NJI1 115 aa5.5□□□□□ -1.53
SMARCAL1-213ENST00000496037 NDUFC2-KCTD14E9PQ53 114 aa5.5□□□□□ -1.53
SMARCAL1-213ENST00000496037 UQCRQO14949 82 aa5.5□□□□□ -1.53
SMARCAL1-213ENST00000496037 SPANXN1Q5VSR9 72 aa5.5□□□□□ -1.53
SMARCAL1-213ENST00000496037 FAM19A3Q7Z5A8 133 aa5.5□□□□□ -1.53
SMARCAL1-213ENST00000496037 C3orf22Q8N5N4 141 aa5.5□□□□□ -1.53
SMARCAL1-213ENST00000496037 FAM104AQ969W3 186 aa5.5□□□□□ -1.53
SMARCAL1-213ENST00000496037 TMEM141Q96I45 108 aa5.5□□□□□ -1.53
SMARCAL1-213ENST00000496037 KRTAP9-8Q9BYQ0 159 aa5.5□□□□□ -1.53
SMARCAL1-213ENST00000496037 FAM168BA1KXE4 195 aa5.49□□□□□ -1.53
SMARCAL1-213ENST00000496037 MGPP08493 103 aa5.49□□□□□ -1.53
SMARCAL1-213ENST00000496037 LGALS3P17931 250 aaKnown RBP5.49□□□□□ -1.53
SMARCAL1-213ENST00000496037 C9orf153Q5TBE3 101 aa5.49□□□□□ -1.53
SMARCAL1-213ENST00000496037 FCGBPQ9Y6R7 5405 aaPredicted RBP5.49□□□□□ -1.53
SMARCAL1-213ENST00000496037 M0QY20 66 aa5.48□□□□□ -1.53
SMARCAL1-213ENST00000496037 M0R2T5 61 aa5.48□□□□□ -1.53
SMARCAL1-213ENST00000496037 COX6CP09669 75 aa5.48□□□□□ -1.53
SMARCAL1-213ENST00000496037 SFTA2Q6UW10 78 aa5.48□□□□□ -1.53
SMARCAL1-213ENST00000496037 C2orf82Q6UX34 121 aa5.48□□□□□ -1.53
SMARCAL1-213ENST00000496037 OPRPNQ99935 248 aaPredicted RBP5.48□□□□□ -1.53
SMARCAL1-213ENST00000496037 SDHAF1A6NFY7 115 aa5.47□□□□□ -1.53
SMARCAL1-213ENST00000496037 LEPROTO15243 131 aa5.47□□□□□ -1.53
SMARCAL1-213ENST00000496037 CXCL5P42830 114 aa5.47□□□□□ -1.53
SMARCAL1-213ENST00000496037 Q1RN00 199 aa5.47□□□□□ -1.53
SMARCAL1-213ENST00000496037 LINC00959A0A1B0GUT2 108 aa5.46□□□□□ -1.54
SMARCAL1-213ENST00000496037 J3QQQ9 107 aa5.46□□□□□ -1.54
SMARCAL1-213ENST00000496037 HERVK_113P63121 156 aa5.46□□□□□ -1.54
SMARCAL1-213ENST00000496037 SS18Q15532 418 aa5.46□□□□□ -1.54
SMARCAL1-213ENST00000496037 KRTAP13-3Q3SY46 172 aa5.46□□□□□ -1.54
SMARCAL1-213ENST00000496037 FP248Q71RG6 208 aaPredicted RBP5.46□□□□□ -1.54
SMARCAL1-213ENST00000496037 LINC00643Q86TS7 51 aa5.46□□□□□ -1.54
SMARCAL1-213ENST00000496037 LAMTOR3Q9UHA4 124 aa5.46□□□□□ -1.54
SMARCAL1-213ENST00000496037 TEX49A0A1B0GTD5 131 aa5.45□□□□□ -1.54
SMARCAL1-213ENST00000496037 AMELXQ99217 191 aa5.45□□□□□ -1.54
SMARCAL1-213ENST00000496037 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.44□□□□□ -1.54
SMARCAL1-213ENST00000496037 FAM236AA0A1B0GUQ0 79 aa5.44□□□□□ -1.54
SMARCAL1-213ENST00000496037 FAM236BA0A1B0GV22 79 aa5.44□□□□□ -1.54
SMARCAL1-213ENST00000496037 IGKV2-29A2NJV5 120 aaPredicted RBP5.44□□□□□ -1.54
SMARCAL1-213ENST00000496037 KRTAP19-2Q3LHN2 52 aa5.44□□□□□ -1.54
SMARCAL1-213ENST00000496037 IGIPA6NJ69 53 aa5.43□□□□□ -1.54
SMARCAL1-213ENST00000496037 H7C423 109 aa5.43□□□□□ -1.54
SMARCAL1-213ENST00000496037 ATOX1O00244 68 aa5.43□□□□□ -1.54
SMARCAL1-213ENST00000496037 COX7A2LO14548 114 aa5.43□□□□□ -1.54
SMARCAL1-213ENST00000496037 COX7CP15954 63 aa5.43□□□□□ -1.54
SMARCAL1-213ENST00000496037 RPL28P46779 137 aaKnown RBP5.43□□□□□ -1.54
SMARCAL1-213ENST00000496037 KRTAP13-2Q52LG2 175 aa5.43□□□□□ -1.54
SMARCAL1-213ENST00000496037 TMEM223A0PJW6 202 aa5.42□□□□□ -1.54
SMARCAL1-213ENST00000496037 LST1O00453 97 aa5.42□□□□□ -1.54
SMARCAL1-213ENST00000496037 TSPEAR-AS2P59090 65 aa5.42□□□□□ -1.54
SMARCAL1-213ENST00000496037 TMEM258P61165 79 aa5.42□□□□□ -1.54
SMARCAL1-213ENST00000496037 SPAG11BQ08648 103 aa5.42□□□□□ -1.54
SMARCAL1-213ENST00000496037 MUSTN1Q8IVN3 82 aa5.42□□□□□ -1.54
SMARCAL1-213ENST00000496037 ANAPC11Q9NYG5 84 aa5.42□□□□□ -1.54
SMARCAL1-213ENST00000496037 ZNF706Q9Y5V0 76 aaPredicted RBP5.42□□□□□ -1.54
SMARCAL1-213ENST00000496037 H7C2G1 150 aa5.41□□□□□ -1.54
SMARCAL1-213ENST00000496037 C5orf38Q86SI9 138 aa5.41□□□□□ -1.54
SMARCAL1-213ENST00000496037 DAND5Q8N907 189 aa5.41□□□□□ -1.54
SMARCAL1-213ENST00000496037 TIMM17BO60830 172 aa5.4□□□□□ -1.54
SMARCAL1-213ENST00000496037 TRACP01848 142 aa5.4□□□□□ -1.54
SMARCAL1-213ENST00000496037 FAM229BQ4G0N7 80 aa5.4□□□□□ -1.54
SMARCAL1-213ENST00000496037 KRTAP7-1Q8IUC3 87 aa5.4□□□□□ -1.54
SMARCAL1-213ENST00000496037 Q8N377 158 aa5.4□□□□□ -1.54
SMARCAL1-213ENST00000496037 RPL39LQ96EH5 51 aaKnown RBP5.4□□□□□ -1.54
SMARCAL1-213ENST00000496037 TRBV6-5A0A0K0K1A5 114 aa5.39□□□□□ -1.55
SMARCAL1-213ENST00000496037 KRTAP16-1A8MUX0 517 aa5.39□□□□□ -1.55
SMARCAL1-213ENST00000496037 TLX1NBP0CAT3 122 aa5.39□□□□□ -1.55
SMARCAL1-213ENST00000496037 POLR2KP53803 58 aaKnown RBP5.39□□□□□ -1.55
SMARCAL1-213ENST00000496037 NDUFA1O15239 70 aa5.38□□□□□ -1.55
SMARCAL1-213ENST00000496037 UBE2AP49459 152 aa5.38□□□□□ -1.55
SMARCAL1-213ENST00000496037 HIST1H4AP62805 103 aaKnown RBP5.38□□□□□ -1.55
SMARCAL1-213ENST00000496037 COPS9Q8WXC6 57 aa5.38□□□□□ -1.55
SMARCAL1-213ENST00000496037 UBE2D4Q9Y2X8 147 aa5.38□□□□□ -1.55
SMARCAL1-213ENST00000496037 ZNF22P17026 224 aaPredicted RBP5.37□□□□□ -1.55
SMARCAL1-213ENST00000496037 LITAFQ99732 161 aa5.37□□□□□ -1.55
SMARCAL1-213ENST00000496037 TRBV27A0A0K0K1C4 114 aa5.36□□□□□ -1.55
SMARCAL1-213ENST00000496037 BCE1O60756 84 aa5.36□□□□□ -1.55
SMARCAL1-213ENST00000496037 SPAG11AQ6PDA7 123 aa5.36□□□□□ -1.55
SMARCAL1-213ENST00000496037 FLGP20930 4061 aaPredicted RBP5.36□□□□□ -1.55
SMARCAL1-213ENST00000496037 I3L3M4 83 aa5.35□□□□□ -1.55
SMARCAL1-213ENST00000496037 LINC00313P59037 77 aa5.35□□□□□ -1.55
SMARCAL1-213ENST00000496037 TIMM21Q9BVV7 248 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms