RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 Q6ZQY7 126 aa9.81□□□□□ -0.84
CLCNKA-207ENST00000495784 hADV29S1A0JD25 119 aa9.8□□□□□ -0.84
CLCNKA-207ENST00000495784 Q6JHZ5 121 aa9.79□□□□□ -0.84
CLCNKA-207ENST00000495784 COX6B2Q6YFQ2 88 aa9.79□□□□□ -0.84
CLCNKA-207ENST00000495784 CLEC2BQ92478 149 aa9.78□□□□□ -0.84
CLCNKA-207ENST00000495784 M0R2T5 61 aa9.77□□□□□ -0.85
CLCNKA-207ENST00000495784 S100A2P29034 98 aa9.77□□□□□ -0.85
CLCNKA-207ENST00000495784 TRBV7-7A0A0K0K1E9 115 aa9.76□□□□□ -0.85
CLCNKA-207ENST00000495784 IGFL1Q6UW32 110 aa9.75□□□□□ -0.85
CLCNKA-207ENST00000495784 HIST3H2BBQ8N257 126 aa9.75□□□□□ -0.85
CLCNKA-207ENST00000495784 HIST1H2BLQ99880 126 aa9.75□□□□□ -0.85
CLCNKA-207ENST00000495784 LORP23490 312 aaPredicted RBP9.74□□□□□ -0.85
CLCNKA-207ENST00000495784 KRTAP10-6P60371 365 aaPredicted RBP9.74□□□□□ -0.85
CLCNKA-207ENST00000495784 OCIAD2Q56VL3 154 aa9.74□□□□□ -0.85
CLCNKA-207ENST00000495784 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.73□□□□□ -0.85
CLCNKA-207ENST00000495784 C12orf57Q99622 126 aa9.72□□□□□ -0.85
CLCNKA-207ENST00000495784 BVES-AS1Q5T3Y7 98 aa9.7□□□□□ -0.86
CLCNKA-207ENST00000495784 PPDPFLQ8WWR9 84 aa9.7□□□□□ -0.86
CLCNKA-207ENST00000495784 OBSCN-AS1Q96MR7 158 aa9.7□□□□□ -0.86
CLCNKA-207ENST00000495784 SNHG12Q9BXW3 62 aa9.7□□□□□ -0.86
CLCNKA-207ENST00000495784 HIST1H4GQ99525 98 aa9.69□□□□□ -0.86
CLCNKA-207ENST00000495784 ATP11AUNQ6ZP68 121 aa9.67□□□□□ -0.86
CLCNKA-207ENST00000495784 H3BUT2 72 aa9.66□□□□□ -0.86
CLCNKA-207ENST00000495784 SCGB1D1O95968 90 aa9.66□□□□□ -0.86
CLCNKA-207ENST00000495784 LST1O00453 97 aa9.65□□□□□ -0.86
CLCNKA-207ENST00000495784 S100A6P06703 90 aa9.65□□□□□ -0.86
CLCNKA-207ENST00000495784 Q75L30 129 aa9.65□□□□□ -0.86
CLCNKA-207ENST00000495784 FLGP20930 4061 aaPredicted RBP9.62□□□□□ -0.87
CLCNKA-207ENST00000495784 Q6Q795 121 aa9.62□□□□□ -0.87
CLCNKA-207ENST00000495784 SNCGO76070 127 aa9.61□□□□□ -0.87
CLCNKA-207ENST00000495784 COX8AP10176 69 aa9.61□□□□□ -0.87
CLCNKA-207ENST00000495784 SS18L2Q9UHA2 77 aa9.6□□□□□ -0.87
CLCNKA-207ENST00000495784 RAB37Q96AX2 223 aa9.59□□□□□ -0.87
CLCNKA-207ENST00000495784 Q96NJ1 140 aa9.59□□□□□ -0.87
CLCNKA-207ENST00000495784 DLEU1O43261 78 aa9.56□□□□□ -0.88
CLCNKA-207ENST00000495784 CFC1P0CG37 223 aa9.56□□□□□ -0.88
CLCNKA-207ENST00000495784 H0YGX0 51 aa9.55□□□□□ -0.88
CLCNKA-207ENST00000495784 NDUFV3P56181 108 aaKnown RBP9.54□□□□□ -0.88
CLCNKA-207ENST00000495784 TEN1Q86WV5 123 aa9.54□□□□□ -0.88
CLCNKA-207ENST00000495784 A0A0B4J2C4 111 aa9.52□□□□□ -0.89
CLCNKA-207ENST00000495784 C14orf144Q96I85 54 aa9.52□□□□□ -0.89
CLCNKA-207ENST00000495784 FAM218AQ96MZ4 157 aa9.52□□□□□ -0.89
CLCNKA-207ENST00000495784 A0A087WSZ3 146 aa9.51□□□□□ -0.89
CLCNKA-207ENST00000495784 S100A1P23297 94 aa9.51□□□□□ -0.89
CLCNKA-207ENST00000495784 C20orf166-AS1Q96NR2 134 aa9.51□□□□□ -0.89
CLCNKA-207ENST00000495784 HIGD1BQ9P298 99 aa9.5□□□□□ -0.89
CLCNKA-207ENST00000495784 H3BMG7 143 aa9.49□□□□□ -0.89
CLCNKA-207ENST00000495784 GHRHP01286 108 aa9.49□□□□□ -0.89
CLCNKA-207ENST00000495784 A8MUU9 505 aa9.48□□□□□ -0.89
CLCNKA-207ENST00000495784 FABP2P12104 132 aa9.48□□□□□ -0.89
CLCNKA-207ENST00000495784 PAM16Q9Y3D7 125 aa9.48□□□□□ -0.89
CLCNKA-207ENST00000495784 SPATA45Q537H7 98 aa9.47□□□□□ -0.89
CLCNKA-207ENST00000495784 TRBV20-1A0A075B6N2 111 aa9.45□□□□□ -0.9
CLCNKA-207ENST00000495784 A0A1B0GX51 115 aa9.45□□□□□ -0.9
CLCNKA-207ENST00000495784 SIGMAR1Q99720 223 aa9.44□□□□□ -0.9
CLCNKA-207ENST00000495784 PRO1854Q9UHT4 67 aa9.44□□□□□ -0.9
CLCNKA-207ENST00000495784 TMEM238LA0A1B0GVL6 79 aa9.43□□□□□ -0.9
CLCNKA-207ENST00000495784 A6NJY4 79 aa9.43□□□□□ -0.9
CLCNKA-207ENST00000495784 DSCR10P59022 87 aa9.43□□□□□ -0.9
CLCNKA-207ENST00000495784 C2orf91Q6ZV80 131 aa9.43□□□□□ -0.9
CLCNKA-207ENST00000495784 CEND1Q8N111 149 aa9.43□□□□□ -0.9
CLCNKA-207ENST00000495784 VAMP8Q9BV40 100 aa9.43□□□□□ -0.9
CLCNKA-207ENST00000495784 A0A1W2PNM2 257 aa9.4□□□□□ -0.9
CLCNKA-207ENST00000495784 TRIAP1O43715 76 aa9.37□□□□□ -0.91
CLCNKA-207ENST00000495784 ANKRD29Q8N6D5 301 aa9.37□□□□□ -0.91
CLCNKA-207ENST00000495784 DNAL4O96015 105 aa9.36□□□□□ -0.91
CLCNKA-207ENST00000495784 IGKV4-1P06312 121 aa9.36□□□□□ -0.91
CLCNKA-207ENST00000495784 FXYD2P54710 66 aa9.36□□□□□ -0.91
CLCNKA-207ENST00000495784 LINC00313P59037 77 aa9.36□□□□□ -0.91
CLCNKA-207ENST00000495784 TRBV7-4A0A0J9YYF1 115 aa9.34□□□□□ -0.91
CLCNKA-207ENST00000495784 A0A1B0GV72 72 aa9.34□□□□□ -0.91
CLCNKA-207ENST00000495784 ORMDL1Q9P0S3 153 aa9.34□□□□□ -0.91
CLCNKA-207ENST00000495784 KRTAP9-8Q9BYQ0 159 aa9.33□□□□□ -0.92
CLCNKA-207ENST00000495784 H3BQ85 93 aa9.32□□□□□ -0.92
CLCNKA-207ENST00000495784 FAM236DA0A1B0GTK5 79 aa9.31□□□□□ -0.92
CLCNKA-207ENST00000495784 FAM236CP0DP71 79 aa9.31□□□□□ -0.92
CLCNKA-207ENST00000495784 PSMB2P49721 201 aa9.31□□□□□ -0.92
CLCNKA-207ENST00000495784 KRTAP16-1A8MUX0 517 aa9.3□□□□□ -0.92
CLCNKA-207ENST00000495784 TMEM256-PLSCR3K7ERE1 68 aa9.28□□□□□ -0.92
CLCNKA-207ENST00000495784 DEFB116Q30KQ4 102 aa9.28□□□□□ -0.92
CLCNKA-207ENST00000495784 TRACP01848 142 aa9.27□□□□□ -0.93
CLCNKA-207ENST00000495784 CCKP06307 115 aa9.27□□□□□ -0.93
CLCNKA-207ENST00000495784 COX6CP09669 75 aa9.27□□□□□ -0.93
CLCNKA-207ENST00000495784 K7ERJ3 54 aa9.26□□□□□ -0.93
CLCNKA-207ENST00000495784 HSD52Q0P140 79 aa9.26□□□□□ -0.93
CLCNKA-207ENST00000495784 NOTCH2NLQ7Z3S9 236 aa9.26□□□□□ -0.93
CLCNKA-207ENST00000495784 IGHV6-1A0A0B4J1U7 121 aa9.25□□□□□ -0.93
CLCNKA-207ENST00000495784 LINC00472Q9H8W2 130 aa9.25□□□□□ -0.93
CLCNKA-207ENST00000495784 RBM12B-AS1Q9P1G2 102 aa9.25□□□□□ -0.93
CLCNKA-207ENST00000495784 USH2AO75445 5202 aa9.25□□□□□ -0.93
CLCNKA-207ENST00000495784 UBE2V1Q13404 147 aa9.21□□□□□ -0.94
CLCNKA-207ENST00000495784 HRES1P13985 223 aa9.2□□□□□ -0.94
CLCNKA-207ENST00000495784 VPS25Q9BRG1 176 aa9.2□□□□□ -0.94
CLCNKA-207ENST00000495784 SSPOA2VEC9 5147 aa9.2□□□□□ -0.94
CLCNKA-207ENST00000495784 MT2AP02795 61 aa9.19□□□□□ -0.94
CLCNKA-207ENST00000495784 MPLKIPQ8TAP9 179 aa9.19□□□□□ -0.94
CLCNKA-207ENST00000495784 C8orf87E5RJ46 101 aa9.17□□□□□ -0.94
CLCNKA-207ENST00000495784 A0A1B0GVX0 72 aa9.16□□□□□ -0.94
CLCNKA-207ENST00000495784 PYY3Q5JQD4 70 aa9.16□□□□□ -0.94
CLCNKA-207ENST00000495784 RBM3P98179 157 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms