RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 PET117Q6UWS5 81 aa9□□□□□ -0.97
TMEM53-209ENST00000495630 SSPOA2VEC9 5147 aa9□□□□□ -0.97
TMEM53-209ENST00000495630 USH2AO75445 5202 aa8.99□□□□□ -0.97
TMEM53-209ENST00000495630 SCGB1D4Q6XE38 83 aa8.99□□□□□ -0.97
TMEM53-209ENST00000495630 Q6ZVH6 145 aa8.99□□□□□ -0.97
TMEM53-209ENST00000495630 TRAV13-2A0A0B4J235 113 aa8.97□□□□□ -0.97
TMEM53-209ENST00000495630 SMIM11BQ8TCY0 68 aa8.97□□□□□ -0.97
TMEM53-209ENST00000495630 MUSTN1Q8IVN3 82 aa8.96□□□□□ -0.98
TMEM53-209ENST00000495630 CLEC2BQ92478 149 aa8.96□□□□□ -0.98
TMEM53-209ENST00000495630 TRBV20-1A0A075B6N2 111 aa8.95□□□□□ -0.98
TMEM53-209ENST00000495630 VAMP3Q15836 100 aa8.95□□□□□ -0.98
TMEM53-209ENST00000495630 Q96NJ1 140 aa8.95□□□□□ -0.98
TMEM53-209ENST00000495630 OCIAD2Q56VL3 154 aa8.94□□□□□ -0.98
TMEM53-209ENST00000495630 IGFL1Q6UW32 110 aa8.94□□□□□ -0.98
TMEM53-209ENST00000495630 LINC00575Q6W349 94 aa8.93□□□□□ -0.98
TMEM53-209ENST00000495630 C3orf79P0CE67 100 aa8.92□□□□□ -0.98
TMEM53-209ENST00000495630 FCGBPQ9Y6R7 5405 aaPredicted RBP8.91□□□□□ -0.98
TMEM53-209ENST00000495630 LST1O00453 97 aa8.91□□□□□ -0.98
TMEM53-209ENST00000495630 C20orf166-AS1Q96NR2 134 aa8.91□□□□□ -0.98
TMEM53-209ENST00000495630 hADV29S1A0JD25 119 aa8.9□□□□□ -0.98
TMEM53-209ENST00000495630 KRTDAPP60985 99 aa8.9□□□□□ -0.98
TMEM53-209ENST00000495630 Q6ZQY7 126 aa8.9□□□□□ -0.98
TMEM53-209ENST00000495630 KRTAP19-1Q8IUB9 90 aa8.89□□□□□ -0.99
TMEM53-209ENST00000495630 MT2AP02795 61 aa8.88□□□□□ -0.99
TMEM53-209ENST00000495630 COA6Q5JTJ3 125 aaKnown RBP8.88□□□□□ -0.99
TMEM53-209ENST00000495630 A8MUU9 505 aa8.87□□□□□ -0.99
TMEM53-209ENST00000495630 ANKRD39Q53RE8 183 aa8.86□□□□□ -0.99
TMEM53-209ENST00000495630 LCE2BO14633 110 aa8.85□□□□□ -0.99
TMEM53-209ENST00000495630 PPDPFLQ8WWR9 84 aa8.84□□□□□ -0.99
TMEM53-209ENST00000495630 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.83□□□□□ -1
TMEM53-209ENST00000495630 SNHG12Q9BXW3 62 aa8.83□□□□□ -1
TMEM53-209ENST00000495630 SCGB1D1O95968 90 aa8.82□□□□□ -1
TMEM53-209ENST00000495630 KRTAP9-3Q9BYQ3 159 aa8.82□□□□□ -1
TMEM53-209ENST00000495630 SS18L2Q9UHA2 77 aa8.81□□□□□ -1
TMEM53-209ENST00000495630 MT1FP04733 61 aa8.8□□□□□ -1
TMEM53-209ENST00000495630 ATOH7Q8N100 152 aa8.8□□□□□ -1
TMEM53-209ENST00000495630 KRTAP10-10P60014 251 aa8.78□□□□□ -1
TMEM53-209ENST00000495630 FAM236DA0A1B0GTK5 79 aa8.77□□□□□ -1.01
TMEM53-209ENST00000495630 H3BUT2 72 aa8.77□□□□□ -1.01
TMEM53-209ENST00000495630 FAM236CP0DP71 79 aa8.77□□□□□ -1.01
TMEM53-209ENST00000495630 SNRPEP62304 92 aaKnown RBP8.75□□□□□ -1.01
TMEM53-209ENST00000495630 TEN1Q86WV5 123 aa8.74□□□□□ -1.01
TMEM53-209ENST00000495630 MACF1Q9UPN3 7388 aaKnown RBP8.74□□□□□ -1.01
TMEM53-209ENST00000495630 KRTAP16-1A8MUX0 517 aa8.73□□□□□ -1.01
TMEM53-209ENST00000495630 BVES-AS1Q5T3Y7 98 aa8.73□□□□□ -1.01
TMEM53-209ENST00000495630 LINC00846Q9NV44 126 aa8.73□□□□□ -1.01
TMEM53-209ENST00000495630 RBM12B-AS1Q9P1G2 102 aa8.73□□□□□ -1.01
TMEM53-209ENST00000495630 S100A2P29034 98 aa8.71□□□□□ -1.02
TMEM53-209ENST00000495630 MPLKIPQ8TAP9 179 aa8.71□□□□□ -1.02
TMEM53-209ENST00000495630 DSCR10P59022 87 aa8.7□□□□□ -1.02
TMEM53-209ENST00000495630 A0A087WSZ3 146 aa8.68□□□□□ -1.02
TMEM53-209ENST00000495630 HSBP1L1C9JCN9 74 aa8.68□□□□□ -1.02
TMEM53-209ENST00000495630 HIST3H2BBQ8N257 126 aa8.68□□□□□ -1.02
TMEM53-209ENST00000495630 C12orf57Q99622 126 aa8.68□□□□□ -1.02
TMEM53-209ENST00000495630 HRES1P13985 223 aa8.67□□□□□ -1.02
TMEM53-209ENST00000495630 LINC00313P59037 77 aa8.67□□□□□ -1.02
TMEM53-209ENST00000495630 HIST1H2BLQ99880 126 aa8.67□□□□□ -1.02
TMEM53-209ENST00000495630 SYNE2Q8WXH0 6885 aaKnown RBP8.67□□□□□ -1.02
TMEM53-209ENST00000495630 SNCGO76070 127 aa8.65□□□□□ -1.02
TMEM53-209ENST00000495630 NDUFV3P56181 108 aaKnown RBP8.65□□□□□ -1.02
TMEM53-209ENST00000495630 S100A6P06703 90 aa8.64□□□□□ -1.03
TMEM53-209ENST00000495630 KRTAP19-6Q3LI70 58 aa8.64□□□□□ -1.03
TMEM53-209ENST00000495630 S100A1P23297 94 aa8.63□□□□□ -1.03
TMEM53-209ENST00000495630 NOTCH2NLQ7Z3S9 236 aa8.63□□□□□ -1.03
TMEM53-209ENST00000495630 SIGMAR1Q99720 223 aa8.61□□□□□ -1.03
TMEM53-209ENST00000495630 H3BMG7 143 aa8.59□□□□□ -1.03
TMEM53-209ENST00000495630 H0YGX0 51 aa8.58□□□□□ -1.04
TMEM53-209ENST00000495630 MTURNQ8N3F0 131 aa8.58□□□□□ -1.04
TMEM53-209ENST00000495630 IGKV4-1P06312 121 aa8.57□□□□□ -1.04
TMEM53-209ENST00000495630 HIST1H4GQ99525 98 aa8.57□□□□□ -1.04
TMEM53-209ENST00000495630 GHRHP01286 108 aa8.56□□□□□ -1.04
TMEM53-209ENST00000495630 A0A1W2PNM2 257 aa8.55□□□□□ -1.04
TMEM53-209ENST00000495630 FAM218AQ96MZ4 157 aa8.53□□□□□ -1.04
TMEM53-209ENST00000495630 FABP2P12104 132 aa8.52□□□□□ -1.05
TMEM53-209ENST00000495630 COX8AP10176 69 aa8.51□□□□□ -1.05
TMEM53-209ENST00000495630 KRTAP6-3Q3LI67 103 aa8.51□□□□□ -1.05
TMEM53-209ENST00000495630 TRBV7-4A0A0J9YYF1 115 aa8.5□□□□□ -1.05
TMEM53-209ENST00000495630 A0A1B0GX51 115 aa8.5□□□□□ -1.05
TMEM53-209ENST00000495630 RAB37Q96AX2 223 aa8.49□□□□□ -1.05
TMEM53-209ENST00000495630 DLEU1O43261 78 aa8.48□□□□□ -1.05
TMEM53-209ENST00000495630 ANKRD29Q8N6D5 301 aa8.47□□□□□ -1.05
TMEM53-209ENST00000495630 LINC00472Q9H8W2 130 aa8.47□□□□□ -1.05
TMEM53-209ENST00000495630 IGHV6-1A0A0B4J1U7 121 aa8.46□□□□□ -1.06
TMEM53-209ENST00000495630 DEFB116Q30KQ4 102 aa8.46□□□□□ -1.06
TMEM53-209ENST00000495630 C14orf144Q96I85 54 aa8.46□□□□□ -1.06
TMEM53-209ENST00000495630 A8MWP4 228 aa8.45□□□□□ -1.06
TMEM53-209ENST00000495630 A0A0B4J2C4 111 aa8.44□□□□□ -1.06
TMEM53-209ENST00000495630 SPINK7P58062 85 aa8.43□□□□□ -1.06
TMEM53-209ENST00000495630 PAM16Q9Y3D7 125 aa8.43□□□□□ -1.06
TMEM53-209ENST00000495630 SPATA45Q537H7 98 aa8.42□□□□□ -1.06
TMEM53-209ENST00000495630 HIGD1BQ9P298 99 aa8.42□□□□□ -1.06
TMEM53-209ENST00000495630 C8orf87E5RJ46 101 aa8.41□□□□□ -1.06
TMEM53-209ENST00000495630 ZCCHC13Q8WW36 166 aaKnown RBP8.41□□□□□ -1.06
TMEM53-209ENST00000495630 H3BQ85 93 aa8.39□□□□□ -1.07
TMEM53-209ENST00000495630 VAMP8Q9BV40 100 aa8.39□□□□□ -1.07
TMEM53-209ENST00000495630 A0A1B0GVX0 72 aa8.37□□□□□ -1.07
TMEM53-209ENST00000495630 TRACP01848 142 aa8.37□□□□□ -1.07
TMEM53-209ENST00000495630 CCKP06307 115 aa8.36□□□□□ -1.07
TMEM53-209ENST00000495630 C2orf91Q6ZV80 131 aa8.36□□□□□ -1.07
TMEM53-209ENST00000495630 Q8N9P0 234 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms