RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 PDE4DIPQ5VU43 2346 aa1.15□□□□□ -2.23
NCKAP1-208ENST00000495619 PTPRQQ9UMZ3 2332 aa1.15□□□□□ -2.23
NCKAP1-208ENST00000495619 DEFB131AP59861 70 aa1.15□□□□□ -2.23
NCKAP1-208ENST00000495619 LEAP2Q969E1 77 aa1.15□□□□□ -2.23
NCKAP1-208ENST00000495619 WNK2Q9Y3S1 2297 aa1.14□□□□□ -2.23
NCKAP1-208ENST00000495619 SPRR1BP22528 89 aa1.14□□□□□ -2.23
NCKAP1-208ENST00000495619 JMJD1CQ15652 2540 aa1.14□□□□□ -2.23
NCKAP1-208ENST00000495619 ALMS1Q8TCU4 4167 aa1.14□□□□□ -2.23
NCKAP1-208ENST00000495619 PLCE1Q9P212 2302 aa1.14□□□□□ -2.23
NCKAP1-208ENST00000495619 MMP24-AS1A0A0U1RRL7 71 aa1.13□□□□□ -2.23
NCKAP1-208ENST00000495619 H3BUA1 57 aa1.13□□□□□ -2.23
NCKAP1-208ENST00000495619 PTPRZ1P23471 2315 aaPredicted RBP1.13□□□□□ -2.23
NCKAP1-208ENST00000495619 PRLHP81277 87 aa1.12□□□□□ -2.23
NCKAP1-208ENST00000495619 PRCDQ00LT1 54 aa1.12□□□□□ -2.23
NCKAP1-208ENST00000495619 KLK9Q2XQG4 91 aa1.12□□□□□ -2.23
NCKAP1-208ENST00000495619 USF3Q68DE3 2245 aa1.12□□□□□ -2.23
NCKAP1-208ENST00000495619 KNL1Q8NG31 2342 aa1.11□□□□□ -2.23
NCKAP1-208ENST00000495619 M0QY20 66 aa1.1□□□□□ -2.23
NCKAP1-208ENST00000495619 NOTCH1P46531 2555 aa1.1□□□□□ -2.23
NCKAP1-208ENST00000495619 PKDREJQ9NTG1 2253 aa1.1□□□□□ -2.23
NCKAP1-208ENST00000495619 A0A0D9SG42 100 aa1.09□□□□□ -2.23
NCKAP1-208ENST00000495619 S4R3F8 94 aa1.09□□□□□ -2.23
NCKAP1-208ENST00000495619 ZNF469Q96JG9 3925 aaPredicted RBP1.08□□□□□ -2.24
NCKAP1-208ENST00000495619 DEFB109BQ30KR1 87 aa1.08□□□□□ -2.24
NCKAP1-208ENST00000495619 TOMM7Q9P0U1 55 aa1.08□□□□□ -2.24
NCKAP1-208ENST00000495619 A8MTW9 85 aa1.07□□□□□ -2.24
NCKAP1-208ENST00000495619 DEFB106AQ8N104 65 aa1.07□□□□□ -2.24
NCKAP1-208ENST00000495619 PIEZO2Q9H5I5 2752 aa1.06□□□□□ -2.24
NCKAP1-208ENST00000495619 CLPSL2Q6UWE3 100 aa1.06□□□□□ -2.24
NCKAP1-208ENST00000495619 PCNX1Q96RV3 2341 aa1.06□□□□□ -2.24
NCKAP1-208ENST00000495619 C2CD3Q4AC94 2353 aa1.06□□□□□ -2.24
NCKAP1-208ENST00000495619 TPRP12270 2363 aaKnown RBP1.05□□□□□ -2.24
NCKAP1-208ENST00000495619 DEFB104AQ8WTQ1 72 aa1.05□□□□□ -2.24
NCKAP1-208ENST00000495619 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
NCKAP1-208ENST00000495619 FBN2P35556 2912 aa1.04□□□□□ -2.24
NCKAP1-208ENST00000495619 SPINK1P00995 79 aa1.04□□□□□ -2.24
NCKAP1-208ENST00000495619 NOP10Q9NPE3 64 aaKnown RBP1.04□□□□□ -2.24
NCKAP1-208ENST00000495619 IGF2RP11717 2491 aa1.03□□□□□ -2.25
NCKAP1-208ENST00000495619 ZNF462Q96JM2 2506 aa1.03□□□□□ -2.25
NCKAP1-208ENST00000495619 SPTBN2O15020 2390 aa1.02□□□□□ -2.25
NCKAP1-208ENST00000495619 K7EIM0 57 aa1.01□□□□□ -2.25
NCKAP1-208ENST00000495619 TMEM167AQ8TBQ9 72 aa1.01□□□□□ -2.25
NCKAP1-208ENST00000495619 SPTBN1Q01082 2364 aaKnown RBP1□□□□□ -2.25
NCKAP1-208ENST00000495619 CSPG4Q6UVK1 2322 aa0.99□□□□□ -2.25
NCKAP1-208ENST00000495619 TENM3Q9P273 2699 aa0.99□□□□□ -2.25
NCKAP1-208ENST00000495619 REV3LO60673 3130 aa0.99□□□□□ -2.25
NCKAP1-208ENST00000495619 ASH1LQ9NR48 2969 aaKnown RBP0.98□□□□□ -2.25
NCKAP1-208ENST00000495619 CACNA1HO95180 2353 aa0.97□□□□□ -2.25
NCKAP1-208ENST00000495619 RPL39P5Q59GN2 51 aa0.97□□□□□ -2.25
NCKAP1-208ENST00000495619 ABCA2Q9BZC7 2435 aa0.96□□□□□ -2.26
NCKAP1-208ENST00000495619 DEFB108AA8MXU0 73 aa0.95□□□□□ -2.26
NCKAP1-208ENST00000495619 H0YGG7 62 aa0.93□□□□□ -2.26
NCKAP1-208ENST00000495619 DSPP15924 2871 aaKnown RBP0.93□□□□□ -2.26
NCKAP1-208ENST00000495619 TTC28Q96AY4 2481 aa0.92□□□□□ -2.26
NCKAP1-208ENST00000495619 ABCA12Q86UK0 2595 aa0.92□□□□□ -2.26
NCKAP1-208ENST00000495619 GVINP1Q7Z2Y8 2422 aa0.91□□□□□ -2.26
NCKAP1-208ENST00000495619 AHNAK2Q8IVF2 5795 aa0.91□□□□□ -2.26
NCKAP1-208ENST00000495619 M0QZ58 72 aa0.91□□□□□ -2.26
NCKAP1-208ENST00000495619 DEFB135Q30KP9 77 aa0.91□□□□□ -2.26
NCKAP1-208ENST00000495619 F8P00451 2351 aa0.91□□□□□ -2.26
NCKAP1-208ENST00000495619 MEGF8Q7Z7M0 2845 aa0.91□□□□□ -2.26
NCKAP1-208ENST00000495619 CELSR2Q9HCU4 2923 aa0.89□□□□□ -2.27
NCKAP1-208ENST00000495619 AKAP6Q13023 2319 aa0.89□□□□□ -2.27
NCKAP1-208ENST00000495619 A0A0C4DFX4 3053 aa0.87□□□□□ -2.27
NCKAP1-208ENST00000495619 PRRC2CQ9Y520 2896 aaKnown RBP0.87□□□□□ -2.27
NCKAP1-208ENST00000495619 EP300Q09472 2414 aaPredicted RBP0.87□□□□□ -2.27
NCKAP1-208ENST00000495619 M0R2T5 61 aa0.87□□□□□ -2.27
NCKAP1-208ENST00000495619 ZNF292O60281 2723 aa0.87□□□□□ -2.27
NCKAP1-208ENST00000495619 PKD1L2Q7Z442 2459 aa0.87□□□□□ -2.27
NCKAP1-208ENST00000495619 CELSR1Q9NYQ6 3014 aa0.86□□□□□ -2.27
NCKAP1-208ENST00000495619 TRANK1O15050 2925 aa0.86□□□□□ -2.27
NCKAP1-208ENST00000495619 APELAP0DMC3 54 aa0.85□□□□□ -2.27
NCKAP1-208ENST00000495619 WNK1Q9H4A3 2382 aa0.84□□□□□ -2.27
NCKAP1-208ENST00000495619 SPINK6Q6UWN8 80 aa0.84□□□□□ -2.27
NCKAP1-208ENST00000495619 CEP290O15078 2479 aa0.84□□□□□ -2.28
NCKAP1-208ENST00000495619 ACACAQ13085 2346 aa0.83□□□□□ -2.28
NCKAP1-208ENST00000495619 POLQO75417 2590 aa0.83□□□□□ -2.28
NCKAP1-208ENST00000495619 TNP1P09430 55 aa0.83□□□□□ -2.28
NCKAP1-208ENST00000495619 CSMD3Q7Z407 3707 aa0.83□□□□□ -2.28
NCKAP1-208ENST00000495619 H3BUX3 64 aa0.82□□□□□ -2.28
NCKAP1-208ENST00000495619 SPART-AS1P0CW21 52 aa0.82□□□□□ -2.28
NCKAP1-208ENST00000495619 SMR3AQ99954 134 aa0.82□□□□□ -2.28
NCKAP1-208ENST00000495619 C9orf92A6NGG3 77 aa0.81□□□□□ -2.28
NCKAP1-208ENST00000495619 CHD7Q9P2D1 2997 aa0.81□□□□□ -2.28
NCKAP1-208ENST00000495619 SPTA1P02549 2419 aa0.8□□□□□ -2.28
NCKAP1-208ENST00000495619 COL6A5A8TX70 2615 aa0.8□□□□□ -2.28
NCKAP1-208ENST00000495619 H3BNG1 76 aa0.8□□□□□ -2.28
NCKAP1-208ENST00000495619 HTN1P15515 57 aa0.8□□□□□ -2.28
NCKAP1-208ENST00000495619 DEFB1P60022 68 aa0.8□□□□□ -2.28
NCKAP1-208ENST00000495619 DMBT1Q9UGM3 2413 aaPredicted RBP0.79□□□□□ -2.28
NCKAP1-208ENST00000495619 KRTAP2-3P0C7H8 128 aa0.79□□□□□ -2.28
NCKAP1-208ENST00000495619 KRTAP2-4Q9BYR9 128 aa0.79□□□□□ -2.28
NCKAP1-208ENST00000495619 KRTAP2-1Q9BYU5 128 aa0.79□□□□□ -2.28
NCKAP1-208ENST00000495619 CHD9Q3L8U1 2897 aa0.79□□□□□ -2.28
NCKAP1-208ENST00000495619 NCOR1O75376 2440 aa0.79□□□□□ -2.28
NCKAP1-208ENST00000495619 CREBBPQ92793 2442 aa0.79□□□□□ -2.28
NCKAP1-208ENST00000495619 NAV2Q8IVL1 2488 aa0.79□□□□□ -2.28
NCKAP1-208ENST00000495619 A0A096LNI7 61 aa0.78□□□□□ -2.28
NCKAP1-208ENST00000495619 STATHP02808 62 aa0.78□□□□□ -2.28
NCKAP1-208ENST00000495619 RHPN1-AS1Q9BWJ2 59 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms