RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 DEFB131BA0A096LNP1 70 aa9.69□□□□□ -0.86
SDF4-207ENST00000494748 DEFB116Q30KQ4 102 aa9.69□□□□□ -0.86
SDF4-207ENST00000494748 UBE2BP63146 152 aa9.68□□□□□ -0.86
SDF4-207ENST00000494748 LYSTQ99698 3801 aa9.68□□□□□ -0.86
SDF4-207ENST00000494748 KRTAP29-1A8MX34 341 aaPredicted RBP9.68□□□□□ -0.86
SDF4-207ENST00000494748 REG3GQ6UW15 175 aa9.67□□□□□ -0.86
SDF4-207ENST00000494748 IGLV8-61A0A075B6I0 122 aa9.66□□□□□ -0.86
SDF4-207ENST00000494748 OXLD1Q5BKU9 147 aa9.66□□□□□ -0.86
SDF4-207ENST00000494748 PSPHP1O15172 72 aa9.65□□□□□ -0.86
SDF4-207ENST00000494748 WFDC13Q8IUB5 93 aa9.64□□□□□ -0.87
SDF4-207ENST00000494748 LINC00588Q9Y4M8 146 aa9.64□□□□□ -0.87
SDF4-207ENST00000494748 STAB1Q9NY15 2570 aa9.64□□□□□ -0.87
SDF4-207ENST00000494748 RPL37AP61513 92 aaKnown RBP9.63□□□□□ -0.87
SDF4-207ENST00000494748 SRRM2Q9UQ35 2752 aaKnown RBP9.62□□□□□ -0.87
SDF4-207ENST00000494748 C11orf45Q8TAV5 145 aa9.62□□□□□ -0.87
SDF4-207ENST00000494748 A0A087WSZ3 146 aa9.61□□□□□ -0.87
SDF4-207ENST00000494748 DNAH9Q9NYC9 4486 aa9.61□□□□□ -0.87
SDF4-207ENST00000494748 NDUFB1O75438 58 aa9.61□□□□□ -0.87
SDF4-207ENST00000494748 PRLHP81277 87 aa9.6□□□□□ -0.87
SDF4-207ENST00000494748 A0A096LNI7 61 aa9.59□□□□□ -0.87
SDF4-207ENST00000494748 A8MU10 97 aa9.59□□□□□ -0.87
SDF4-207ENST00000494748 A8MUN3 132 aa9.59□□□□□ -0.87
SDF4-207ENST00000494748 CNBPP62633 177 aaKnown RBP9.59□□□□□ -0.88
SDF4-207ENST00000494748 Q5VV11 94 aa9.58□□□□□ -0.88
SDF4-207ENST00000494748 LINC00208Q96KT6 92 aa9.58□□□□□ -0.88
SDF4-207ENST00000494748 B9D2Q9BPU9 175 aa9.58□□□□□ -0.88
SDF4-207ENST00000494748 TENM2Q9NT68 2774 aa9.57□□□□□ -0.88
SDF4-207ENST00000494748 HUWE1Q7Z6Z7 4374 aaKnown RBP9.56□□□□□ -0.88
SDF4-207ENST00000494748 SPANXA2-OT1Q8N9U9 137 aa9.56□□□□□ -0.88
SDF4-207ENST00000494748 CSMD3Q7Z407 3707 aa9.56□□□□□ -0.88
SDF4-207ENST00000494748 MP68P56378 58 aa9.56□□□□□ -0.88
SDF4-207ENST00000494748 KRTAP11-1Q8IUC1 163 aa9.55□□□□□ -0.88
SDF4-207ENST00000494748 C9orf163Q8N9P6 203 aa9.55□□□□□ -0.88
SDF4-207ENST00000494748 H0Y9P7 68 aa9.54□□□□□ -0.88
SDF4-207ENST00000494748 LINC00472Q9H8W2 130 aa9.53□□□□□ -0.88
SDF4-207ENST00000494748 Q8N9P0 234 aaPredicted RBP9.53□□□□□ -0.88
SDF4-207ENST00000494748 CASC2Q6XLA1 102 aa9.52□□□□□ -0.89
SDF4-207ENST00000494748 PMAIP1Q13794 54 aa9.52□□□□□ -0.89
SDF4-207ENST00000494748 H3BPC8 53 aa9.51□□□□□ -0.89
SDF4-207ENST00000494748 IGKV2-24A0A0C4DH68 120 aa9.49□□□□□ -0.89
SDF4-207ENST00000494748 A8MWP4 228 aa9.49□□□□□ -0.89
SDF4-207ENST00000494748 C16orf90A8MZG2 172 aa9.49□□□□□ -0.89
SDF4-207ENST00000494748 SPRR1BP22528 89 aa9.49□□□□□ -0.89
SDF4-207ENST00000494748 FBN1P35555 2871 aaKnown RBP9.49□□□□□ -0.89
SDF4-207ENST00000494748 UBE2AP49459 152 aa9.48□□□□□ -0.89
SDF4-207ENST00000494748 KRTAP1-5Q9BYS1 174 aa9.47□□□□□ -0.89
SDF4-207ENST00000494748 MMP24-AS1A0A0U1RRL7 71 aa9.45□□□□□ -0.9
SDF4-207ENST00000494748 SPTSSBQ8NFR3 76 aa9.45□□□□□ -0.9
SDF4-207ENST00000494748 DNAH7Q8WXX0 4024 aa9.44□□□□□ -0.9
SDF4-207ENST00000494748 H0Y9J4 135 aa9.43□□□□□ -0.9
SDF4-207ENST00000494748 PHF5AQ7RTV0 110 aaKnown RBP9.43□□□□□ -0.9
SDF4-207ENST00000494748 LIMD2Q9BT23 127 aa9.42□□□□□ -0.9
SDF4-207ENST00000494748 ASB16-AS1Q495Z4 193 aa9.41□□□□□ -0.9
SDF4-207ENST00000494748 IGLV7-46A0A075B6I9 117 aa9.4□□□□□ -0.9
SDF4-207ENST00000494748 CHTF8P0CG12 524 aa9.4□□□□□ -0.9
SDF4-207ENST00000494748 Q96NJ1 140 aa9.4□□□□□ -0.91
SDF4-207ENST00000494748 COA5Q86WW8 74 aa9.39□□□□□ -0.91
SDF4-207ENST00000494748 PRR15LQ9BU68 103 aa9.39□□□□□ -0.91
SDF4-207ENST00000494748 LOC101927531A0A1B0GV80 90 aa9.39□□□□□ -0.91
SDF4-207ENST00000494748 LCA10Q71F78 164 aa9.39□□□□□ -0.91
SDF4-207ENST00000494748 CHKB-CPT1BH3BT56 60 aa9.38□□□□□ -0.91
SDF4-207ENST00000494748 Q75L30 129 aa9.38□□□□□ -0.91
SDF4-207ENST00000494748 DYNC2H1Q8NCM8 4307 aaKnown RBP9.37□□□□□ -0.91
SDF4-207ENST00000494748 CD164Q04900 197 aa9.36□□□□□ -0.91
SDF4-207ENST00000494748 KRTAP13-1Q8IUC0 172 aa9.36□□□□□ -0.91
SDF4-207ENST00000494748 COL7A1Q02388 2944 aa9.35□□□□□ -0.91
SDF4-207ENST00000494748 PLAC8Q9NZF1 115 aa9.34□□□□□ -0.91
SDF4-207ENST00000494748 KRTAP24-1Q3LI83 254 aa9.32□□□□□ -0.92
SDF4-207ENST00000494748 Q6ZR54 194 aa9.32□□□□□ -0.92
SDF4-207ENST00000494748 NDUFS5O43920 106 aa9.31□□□□□ -0.92
SDF4-207ENST00000494748 PANO1I0J062 215 aa9.3□□□□□ -0.92
SDF4-207ENST00000494748 PCOTHQ58A44 107 aa9.3□□□□□ -0.92
SDF4-207ENST00000494748 FRAS1Q86XX4 4008 aa9.27□□□□□ -0.93
SDF4-207ENST00000494748 ALMS1Q8TCU4 4167 aa9.26□□□□□ -0.93
SDF4-207ENST00000494748 A6NN06 94 aa9.26□□□□□ -0.93
SDF4-207ENST00000494748 MOBPQ13875 183 aa9.26□□□□□ -0.93
SDF4-207ENST00000494748 LINC01558Q9Y6Z2 57 aa9.26□□□□□ -0.93
SDF4-207ENST00000494748 STAB2Q8WWQ8 2551 aa9.26□□□□□ -0.93
SDF4-207ENST00000494748 ATP11AUNQ6ZP68 121 aa9.26□□□□□ -0.93
SDF4-207ENST00000494748 C8orf17Q9NRJ1 99 aa9.26□□□□□ -0.93
SDF4-207ENST00000494748 TP53AIP1Q9HCN2 124 aa9.26□□□□□ -0.93
SDF4-207ENST00000494748 DNAH8Q96JB1 4490 aa9.25□□□□□ -0.93
SDF4-207ENST00000494748 KTN1-AS1Q86SY8 53 aa9.25□□□□□ -0.93
SDF4-207ENST00000494748 A6NED7 52 aa9.23□□□□□ -0.93
SDF4-207ENST00000494748 K7EIL1 84 aa9.23□□□□□ -0.93
SDF4-207ENST00000494748 CDC42SE1Q9NRR8 79 aa9.23□□□□□ -0.93
SDF4-207ENST00000494748 HECTD4Q9Y4D8 3996 aa9.23□□□□□ -0.93
SDF4-207ENST00000494748 PLECQ15149 4684 aaKnown RBP9.23□□□□□ -0.93
SDF4-207ENST00000494748 HRES1P13985 223 aa9.22□□□□□ -0.93
SDF4-207ENST00000494748 SPAG11AQ6PDA7 123 aa9.21□□□□□ -0.93
SDF4-207ENST00000494748 LINC00483Q53H64 154 aa9.21□□□□□ -0.94
SDF4-207ENST00000494748 IGLV9-49A0A0B4J1Y8 123 aa9.2□□□□□ -0.94
SDF4-207ENST00000494748 A0A087X002 238 aa9.2□□□□□ -0.94
SDF4-207ENST00000494748 C14orf177Q52M58 125 aa9.2□□□□□ -0.94
SDF4-207ENST00000494748 NOTCH2NLQ7Z3S9 236 aa9.2□□□□□ -0.94
SDF4-207ENST00000494748 A0A1B0GVX0 72 aa9.19□□□□□ -0.94
SDF4-207ENST00000494748 UBE2DNLQ8IWF7 75 aa9.17□□□□□ -0.94
SDF4-207ENST00000494748 APLNQ9ULZ1 77 aa9.17□□□□□ -0.94
SDF4-207ENST00000494748 SPINK7P58062 85 aa9.17□□□□□ -0.94
SDF4-207ENST00000494748 IGHV6-1A0A0B4J1U7 121 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 180.5 ms