RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 MXRA5Q9NR99 2828 aa2.84□□□□□ -1.96
PRKD3-210ENST00000494667 C2CD3Q4AC94 2353 aa2.83□□□□□ -1.96
PRKD3-210ENST00000494667 KRTAP10-3P60369 221 aa2.83□□□□□ -1.96
PRKD3-210ENST00000494667 PRLHP81277 87 aa2.83□□□□□ -1.96
PRKD3-210ENST00000494667 ITPR1Q14643 2758 aa2.83□□□□□ -1.96
PRKD3-210ENST00000494667 MAPK1IP1LQ8NDC0 245 aa2.83□□□□□ -1.96
PRKD3-210ENST00000494667 MUC3AQ02505 3323 aa2.83□□□□□ -1.96
PRKD3-210ENST00000494667 C1orf134Q5TEV5 83 aa2.83□□□□□ -1.96
PRKD3-210ENST00000494667 KRTAP1-1Q07627 177 aa2.82□□□□□ -1.96
PRKD3-210ENST00000494667 Q5W150 140 aa2.82□□□□□ -1.96
PRKD3-210ENST00000494667 SPTA1P02549 2419 aa2.82□□□□□ -1.96
PRKD3-210ENST00000494667 ATRXP46100 2492 aa2.82□□□□□ -1.96
PRKD3-210ENST00000494667 NBASA2RRP1 2371 aa2.82□□□□□ -1.96
PRKD3-210ENST00000494667 CREBBPQ92793 2442 aa2.81□□□□□ -1.96
PRKD3-210ENST00000494667 IGKV2-30P06310 120 aa2.81□□□□□ -1.96
PRKD3-210ENST00000494667 HTN3P15516 51 aa2.81□□□□□ -1.96
PRKD3-210ENST00000494667 CEP295Q9C0D2 2601 aa2.81□□□□□ -1.96
PRKD3-210ENST00000494667 A0A096LNI7 61 aa2.81□□□□□ -1.96
PRKD3-210ENST00000494667 ANAPC11Q9NYG5 84 aa2.8□□□□□ -1.96
PRKD3-210ENST00000494667 CSPG4Q6UVK1 2322 aa2.8□□□□□ -1.96
PRKD3-210ENST00000494667 FAM229AH3BQW9 127 aa2.8□□□□□ -1.96
PRKD3-210ENST00000494667 KRTAP11-1Q8IUC1 163 aa2.8□□□□□ -1.96
PRKD3-210ENST00000494667 OTOGQ6ZRI0 2925 aa2.8□□□□□ -1.96
PRKD3-210ENST00000494667 APCP25054 2843 aa2.8□□□□□ -1.96
PRKD3-210ENST00000494667 IGLV5-52A0A0A0MRZ9 124 aa2.79□□□□□ -1.96
PRKD3-210ENST00000494667 CASC10Q5T4H9 136 aa2.79□□□□□ -1.96
PRKD3-210ENST00000494667 LY6G6CO95867 125 aa2.79□□□□□ -1.96
PRKD3-210ENST00000494667 UTP20O75691 2785 aaKnown RBP2.79□□□□□ -1.96
PRKD3-210ENST00000494667 ZNF706Q9Y5V0 76 aaPredicted RBP2.79□□□□□ -1.96
PRKD3-210ENST00000494667 LCE2BO14633 110 aa2.78□□□□□ -1.96
PRKD3-210ENST00000494667 CDK2AP2O75956 126 aa2.78□□□□□ -1.96
PRKD3-210ENST00000494667 WWC2-AS2Q96NR7 200 aa2.78□□□□□ -1.96
PRKD3-210ENST00000494667 IGKV2D-30A0A075B6S6 120 aa2.78□□□□□ -1.96
PRKD3-210ENST00000494667 K7EIL1 84 aa2.77□□□□□ -1.97
PRKD3-210ENST00000494667 C14orf177Q52M58 125 aa2.77□□□□□ -1.97
PRKD3-210ENST00000494667 LINC00304Q8N9R0 145 aa2.77□□□□□ -1.97
PRKD3-210ENST00000494667 P0C880 135 aa2.77□□□□□ -1.97
PRKD3-210ENST00000494667 TLN2Q9Y4G6 2542 aa2.76□□□□□ -1.97
PRKD3-210ENST00000494667 DOPEY1Q5JWR5 2465 aa2.76□□□□□ -1.97
PRKD3-210ENST00000494667 CSMD2Q7Z408 3487 aa2.76□□□□□ -1.97
PRKD3-210ENST00000494667 KRTAP17-1Q9BYP8 105 aa2.76□□□□□ -1.97
PRKD3-210ENST00000494667 KRTAP10-9P60411 292 aa2.75□□□□□ -1.97
PRKD3-210ENST00000494667 FBN2P35556 2912 aa2.75□□□□□ -1.97
PRKD3-210ENST00000494667 ANK2Q01484 3957 aa2.75□□□□□ -1.97
PRKD3-210ENST00000494667 PTPN13Q12923 2485 aa2.75□□□□□ -1.97
PRKD3-210ENST00000494667 TRRAPQ9Y4A5 3859 aa2.75□□□□□ -1.97
PRKD3-210ENST00000494667 VPS13DQ5THJ4 4388 aa2.74□□□□□ -1.97
PRKD3-210ENST00000494667 DNAH3Q8TD57 4116 aa2.74□□□□□ -1.97
PRKD3-210ENST00000494667 KRTAP16-1A8MUX0 517 aa2.74□□□□□ -1.97
PRKD3-210ENST00000494667 H0YAA0 97 aa2.74□□□□□ -1.97
PRKD3-210ENST00000494667 PANO1I0J062 215 aa2.74□□□□□ -1.97
PRKD3-210ENST00000494667 SPG11Q96JI7 2443 aa2.74□□□□□ -1.97
PRKD3-210ENST00000494667 JMJD1CQ15652 2540 aa2.73□□□□□ -1.97
PRKD3-210ENST00000494667 DYNC2H1Q8NCM8 4307 aaKnown RBP2.73□□□□□ -1.97
PRKD3-210ENST00000494667 ANKRD17O75179 2603 aaKnown RBP2.73□□□□□ -1.97
PRKD3-210ENST00000494667 Q6ZSA8 131 aa2.73□□□□□ -1.97
PRKD3-210ENST00000494667 ZANQ9Y493 2812 aa2.73□□□□□ -1.97
PRKD3-210ENST00000494667 SPTBN4Q9H254 2564 aa2.72□□□□□ -1.97
PRKD3-210ENST00000494667 TEX15Q9BXT5 2789 aa2.71□□□□□ -1.98
PRKD3-210ENST00000494667 NIPBLQ6KC79 2804 aaeCLIP2.71□□□□□ -1.98
PRKD3-210ENST00000494667 GVINP1Q7Z2Y8 2422 aa2.71□□□□□ -1.98
PRKD3-210ENST00000494667 SPACA4Q8TDM5 124 aa2.71□□□□□ -1.98
PRKD3-210ENST00000494667 GCN1Q92616 2671 aaKnown RBP2.71□□□□□ -1.98
PRKD3-210ENST00000494667 NUPR2A6NF83 97 aa2.7□□□□□ -1.98
PRKD3-210ENST00000494667 NF1P21359 2839 aa2.7□□□□□ -1.98
PRKD3-210ENST00000494667 IGLV9-49A0A0B4J1Y8 123 aa2.7□□□□□ -1.98
PRKD3-210ENST00000494667 SSBP3-AS1Q7Z2R9 100 aa2.7□□□□□ -1.98
PRKD3-210ENST00000494667 DNAH8Q96JB1 4490 aa2.7□□□□□ -1.98
PRKD3-210ENST00000494667 KRTAP15-1Q3LI76 137 aa2.69□□□□□ -1.98
PRKD3-210ENST00000494667 MYO9AB2RTY4 2548 aa2.69□□□□□ -1.98
PRKD3-210ENST00000494667 HIVEP1P15822 2718 aa2.69□□□□□ -1.98
PRKD3-210ENST00000494667 CFAP46Q8IYW2 2715 aa2.69□□□□□ -1.98
PRKD3-210ENST00000494667 LYSTQ99698 3801 aa2.69□□□□□ -1.98
PRKD3-210ENST00000494667 A0A087WTM6 91 aa2.69□□□□□ -1.98
PRKD3-210ENST00000494667 PRKDCP78527 4128 aaKnown RBP2.69□□□□□ -1.98
PRKD3-210ENST00000494667 H1FX-AS1Q4G0G2 97 aa2.69□□□□□ -1.98
PRKD3-210ENST00000494667 DNAH17Q9UFH2 4485 aa2.68□□□□□ -1.98
PRKD3-210ENST00000494667 FN1P02751 2386 aaKnown RBP2.68□□□□□ -1.98
PRKD3-210ENST00000494667 ZNF469Q96JG9 3925 aaPredicted RBP2.68□□□□□ -1.98
PRKD3-210ENST00000494667 DNAH10Q8IVF4 4471 aa2.68□□□□□ -1.98
PRKD3-210ENST00000494667 KRTAP1-5Q9BYS1 174 aa2.68□□□□□ -1.98
PRKD3-210ENST00000494667 KRTAP10-11P60412 298 aa2.67□□□□□ -1.98
PRKD3-210ENST00000494667 CUBNO60494 3623 aa2.67□□□□□ -1.98
PRKD3-210ENST00000494667 NBEAL2Q6ZNJ1 2754 aa2.67□□□□□ -1.98
PRKD3-210ENST00000494667 UBR5O95071 2799 aaPredicted RBP2.67□□□□□ -1.98
PRKD3-210ENST00000494667 FRAS1Q86XX4 4008 aa2.67□□□□□ -1.98
PRKD3-210ENST00000494667 A0A1B0GU33 70 aa2.66□□□□□ -1.98
PRKD3-210ENST00000494667 DNAH9Q9NYC9 4486 aa2.66□□□□□ -1.98
PRKD3-210ENST00000494667 DNAH7Q8WXX0 4024 aa2.66□□□□□ -1.98
PRKD3-210ENST00000494667 ZFYVE26Q68DK2 2539 aa2.66□□□□□ -1.98
PRKD3-210ENST00000494667 EPG5Q9HCE0 2579 aa2.66□□□□□ -1.98
PRKD3-210ENST00000494667 C20orf166-AS1Q96NR2 134 aa2.66□□□□□ -1.98
PRKD3-210ENST00000494667 PSORS1C2Q9UIG4 136 aa2.66□□□□□ -1.98
PRKD3-210ENST00000494667 COX6B2Q6YFQ2 88 aa2.65□□□□□ -1.98
PRKD3-210ENST00000494667 HIVEP2P31629 2446 aa2.65□□□□□ -1.98
PRKD3-210ENST00000494667 Q6ZRN7 208 aaPredicted RBP2.65□□□□□ -1.99
PRKD3-210ENST00000494667 CMYA5Q8N3K9 4069 aa2.65□□□□□ -1.99
PRKD3-210ENST00000494667 TENM4Q6N022 2769 aa2.65□□□□□ -1.99
PRKD3-210ENST00000494667 ITPR3Q14573 2671 aa2.64□□□□□ -1.99
PRKD3-210ENST00000494667 USP9XQ93008 2570 aaPredicted RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms