RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 HIST1H2BOP23527 126 aa5.05□□□□□ -1.6
UBR4-216ENST00000494503 HIST1H2BBP33778 126 aa5.05□□□□□ -1.6
UBR4-216ENST00000494503 HIST1H2BDP58876 126 aa5.05□□□□□ -1.6
UBR4-216ENST00000494503 HIST1H2BCP62807 126 aa5.05□□□□□ -1.6
UBR4-216ENST00000494503 VAMP3Q15836 100 aa5.05□□□□□ -1.6
UBR4-216ENST00000494503 HIST2H2BEQ16778 126 aa5.05□□□□□ -1.6
UBR4-216ENST00000494503 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.05□□□□□ -1.6
UBR4-216ENST00000494503 ATOH7Q8N100 152 aa5.05□□□□□ -1.6
UBR4-216ENST00000494503 HIST1H2BHQ93079 126 aa5.05□□□□□ -1.6
UBR4-216ENST00000494503 HIST1H2BNQ99877 126 aa5.05□□□□□ -1.6
UBR4-216ENST00000494503 HIST1H2BMQ99879 126 aa5.05□□□□□ -1.6
UBR4-216ENST00000494503 FLGP20930 4061 aaPredicted RBP5.03□□□□□ -1.6
UBR4-216ENST00000494503 Q6ZQY7 126 aa5.03□□□□□ -1.6
UBR4-216ENST00000494503 Q6ZVH6 145 aa5.03□□□□□ -1.6
UBR4-216ENST00000494503 CLEC2BQ92478 149 aa5.03□□□□□ -1.6
UBR4-216ENST00000494503 TRBV7-7A0A0K0K1E9 115 aa5.02□□□□□ -1.61
UBR4-216ENST00000494503 Q6JHZ5 121 aa5.02□□□□□ -1.61
UBR4-216ENST00000494503 Q96NJ1 140 aa5.02□□□□□ -1.61
UBR4-216ENST00000494503 hADV29S1A0JD25 119 aa5.01□□□□□ -1.61
UBR4-216ENST00000494503 IGFL1Q6UW32 110 aa5.01□□□□□ -1.61
UBR4-216ENST00000494503 LST1O00453 97 aa5□□□□□ -1.61
UBR4-216ENST00000494503 Q75L30 129 aa5□□□□□ -1.61
UBR4-216ENST00000494503 TRBV20-1A0A075B6N2 111 aa4.99□□□□□ -1.61
UBR4-216ENST00000494503 LINC00575Q6W349 94 aa4.99□□□□□ -1.61
UBR4-216ENST00000494503 SNHG12Q9BXW3 62 aa4.99□□□□□ -1.61
UBR4-216ENST00000494503 H3BUT2 72 aa4.98□□□□□ -1.61
UBR4-216ENST00000494503 CFC1P0CG37 223 aa4.98□□□□□ -1.61
UBR4-216ENST00000494503 OCIAD2Q56VL3 154 aa4.98□□□□□ -1.61
UBR4-216ENST00000494503 KRTAP9-7A8MTY7 169 aa4.97□□□□□ -1.61
UBR4-216ENST00000494503 C12orf57Q99622 126 aa4.97□□□□□ -1.61
UBR4-216ENST00000494503 FAM236DA0A1B0GTK5 79 aa4.96□□□□□ -1.62
UBR4-216ENST00000494503 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.96□□□□□ -1.62
UBR4-216ENST00000494503 FAM236CP0DP71 79 aa4.96□□□□□ -1.62
UBR4-216ENST00000494503 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.95□□□□□ -1.62
UBR4-216ENST00000494503 SS18L2Q9UHA2 77 aa4.95□□□□□ -1.62
UBR4-216ENST00000494503 HSBP1L1C9JCN9 74 aa4.94□□□□□ -1.62
UBR4-216ENST00000494503 SCGB1D1O95968 90 aa4.93□□□□□ -1.62
UBR4-216ENST00000494503 BVES-AS1Q5T3Y7 98 aa4.93□□□□□ -1.62
UBR4-216ENST00000494503 SIGMAR1Q99720 223 aa4.92□□□□□ -1.62
UBR4-216ENST00000494503 SNCGO76070 127 aa4.91□□□□□ -1.62
UBR4-216ENST00000494503 DSCR10P59022 87 aa4.91□□□□□ -1.62
UBR4-216ENST00000494503 SNRPEP62304 92 aaKnown RBP4.91□□□□□ -1.62
UBR4-216ENST00000494503 COA6Q5JTJ3 125 aaKnown RBP4.91□□□□□ -1.62
UBR4-216ENST00000494503 PPDPFLQ8WWR9 84 aa4.91□□□□□ -1.62
UBR4-216ENST00000494503 HIST1H4GQ99525 98 aa4.91□□□□□ -1.62
UBR4-216ENST00000494503 A0A087WSZ3 146 aa4.9□□□□□ -1.63
UBR4-216ENST00000494503 C20orf166-AS1Q96NR2 134 aa4.9□□□□□ -1.63
UBR4-216ENST00000494503 KRTAP9-8Q9BYQ0 159 aa4.9□□□□□ -1.63
UBR4-216ENST00000494503 S100A2P29034 98 aa4.89□□□□□ -1.63
UBR4-216ENST00000494503 A8MUU9 505 aa4.88□□□□□ -1.63
UBR4-216ENST00000494503 TEN1Q86WV5 123 aa4.88□□□□□ -1.63
UBR4-216ENST00000494503 USH2AO75445 5202 aa4.88□□□□□ -1.63
UBR4-216ENST00000494503 FABP2P12104 132 aa4.87□□□□□ -1.63
UBR4-216ENST00000494503 NDUFV3P56181 108 aaKnown RBP4.87□□□□□ -1.63
UBR4-216ENST00000494503 RAB37Q96AX2 223 aa4.87□□□□□ -1.63
UBR4-216ENST00000494503 RBM12B-AS1Q9P1G2 102 aa4.87□□□□□ -1.63
UBR4-216ENST00000494503 SSPOA2VEC9 5147 aa4.87□□□□□ -1.63
UBR4-216ENST00000494503 A0A1B0GV72 72 aa4.86□□□□□ -1.63
UBR4-216ENST00000494503 H3BMG7 143 aa4.85□□□□□ -1.63
UBR4-216ENST00000494503 MT2AP02795 61 aa4.85□□□□□ -1.63
UBR4-216ENST00000494503 LINC00313P59037 77 aa4.85□□□□□ -1.63
UBR4-216ENST00000494503 KRTAP10-10P60014 251 aa4.85□□□□□ -1.63
UBR4-216ENST00000494503 IGKV4-1P06312 121 aa4.84□□□□□ -1.63
UBR4-216ENST00000494503 HIST1H2BLQ99880 126 aa4.83□□□□□ -1.64
UBR4-216ENST00000494503 H0YGX0 51 aa4.82□□□□□ -1.64
UBR4-216ENST00000494503 KRTAP19-1Q8IUB9 90 aa4.82□□□□□ -1.64
UBR4-216ENST00000494503 HIST3H2BBQ8N257 126 aa4.82□□□□□ -1.64
UBR4-216ENST00000494503 FAM218AQ96MZ4 157 aa4.82□□□□□ -1.64
UBR4-216ENST00000494503 LCE2BO14633 110 aa4.81□□□□□ -1.64
UBR4-216ENST00000494503 MT1FP04733 61 aa4.81□□□□□ -1.64
UBR4-216ENST00000494503 DEFB116Q30KQ4 102 aa4.81□□□□□ -1.64
UBR4-216ENST00000494503 IGHV6-1A0A0B4J1U7 121 aa4.8□□□□□ -1.64
UBR4-216ENST00000494503 H3BS24 57 aa4.8□□□□□ -1.64
UBR4-216ENST00000494503 S100A6P06703 90 aa4.8□□□□□ -1.64
UBR4-216ENST00000494503 FCGBPQ9Y6R7 5405 aaPredicted RBP4.79□□□□□ -1.64
UBR4-216ENST00000494503 KRTAP16-1A8MUX0 517 aa4.79□□□□□ -1.64
UBR4-216ENST00000494503 COX8AP10176 69 aa4.79□□□□□ -1.64
UBR4-216ENST00000494503 MTURNQ8N3F0 131 aa4.79□□□□□ -1.64
UBR4-216ENST00000494503 ANKRD29Q8N6D5 301 aa4.79□□□□□ -1.64
UBR4-216ENST00000494503 A0A1W2PNM2 257 aa4.78□□□□□ -1.64
UBR4-216ENST00000494503 DNAL4O96015 105 aa4.78□□□□□ -1.64
UBR4-216ENST00000494503 C14orf144Q96I85 54 aa4.78□□□□□ -1.64
UBR4-216ENST00000494503 A0A0B4J2C4 111 aa4.77□□□□□ -1.65
UBR4-216ENST00000494503 HRES1P13985 223 aa4.77□□□□□ -1.65
UBR4-216ENST00000494503 NOTCH2NLQ7Z3S9 236 aa4.77□□□□□ -1.65
UBR4-216ENST00000494503 TRACP01848 142 aa4.76□□□□□ -1.65
UBR4-216ENST00000494503 VPS25Q9BRG1 176 aa4.76□□□□□ -1.65
UBR4-216ENST00000494503 LINC00846Q9NV44 126 aa4.76□□□□□ -1.65
UBR4-216ENST00000494503 KRTAP9-3Q9BYQ3 159 aa4.75□□□□□ -1.65
UBR4-216ENST00000494503 ORMDL1Q9P0S3 153 aa4.75□□□□□ -1.65
UBR4-216ENST00000494503 PAM16Q9Y3D7 125 aa4.75□□□□□ -1.65
UBR4-216ENST00000494503 TRBV7-4A0A0J9YYF1 115 aa4.74□□□□□ -1.65
UBR4-216ENST00000494503 A0A1B0GX51 115 aa4.74□□□□□ -1.65
UBR4-216ENST00000494503 CCKP06307 115 aa4.74□□□□□ -1.65
UBR4-216ENST00000494503 PSMB2P49721 201 aa4.74□□□□□ -1.65
UBR4-216ENST00000494503 PRO1854Q9UHT4 67 aa4.74□□□□□ -1.65
UBR4-216ENST00000494503 SYNE2Q8WXH0 6885 aaKnown RBP4.73□□□□□ -1.65
UBR4-216ENST00000494503 DLEU1O43261 78 aa4.73□□□□□ -1.65
UBR4-216ENST00000494503 TRIAP1O43715 76 aa4.73□□□□□ -1.65
UBR4-216ENST00000494503 SPATA45Q537H7 98 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms