RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 Q6ZVQ6 151 aa10.16□□□□□ -0.78
ATG4B-225ENST00000494465 C1orf137Q5JT78 98 aa10.15□□□□□ -0.78
ATG4B-225ENST00000494465 SPRR1BP22528 89 aa10.15□□□□□ -0.79
ATG4B-225ENST00000494465 A0A1W2PNM2 257 aa10.14□□□□□ -0.79
ATG4B-225ENST00000494465 PSORS1C2Q9UIG4 136 aa10.14□□□□□ -0.79
ATG4B-225ENST00000494465 ATP5EP2Q5VTU8 51 aa10.13□□□□□ -0.79
ATG4B-225ENST00000494465 FAM30AQ9NZY2 134 aa10.13□□□□□ -0.79
ATG4B-225ENST00000494465 IGLV8-61A0A075B6I0 122 aa10.11□□□□□ -0.79
ATG4B-225ENST00000494465 SS18L2Q9UHA2 77 aa10.11□□□□□ -0.79
ATG4B-225ENST00000494465 FAM236AA0A1B0GUQ0 79 aa10.1□□□□□ -0.79
ATG4B-225ENST00000494465 FAM236BA0A1B0GV22 79 aa10.1□□□□□ -0.79
ATG4B-225ENST00000494465 F8WEM9 126 aa10.1□□□□□ -0.79
ATG4B-225ENST00000494465 Q8NBF4 154 aa10.1□□□□□ -0.79
ATG4B-225ENST00000494465 SPRR4Q96PI1 79 aa10.09□□□□□ -0.79
ATG4B-225ENST00000494465 A0A0G2JQZ4 141 aa10.08□□□□□ -0.8
ATG4B-225ENST00000494465 IGFL1Q6UW32 110 aa10.08□□□□□ -0.8
ATG4B-225ENST00000494465 Q6ZSA8 131 aa10.08□□□□□ -0.8
ATG4B-225ENST00000494465 A0A087WVE0 104 aa10.08□□□□□ -0.8
ATG4B-225ENST00000494465 KRTAP10-1P60331 282 aa10.08□□□□□ -0.8
ATG4B-225ENST00000494465 HAMPP81172 84 aa10.08□□□□□ -0.8
ATG4B-225ENST00000494465 CIRBP-AS1Q8TBR5 109 aa10.08□□□□□ -0.8
ATG4B-225ENST00000494465 A0A1B0GW54 56 aa10.07□□□□□ -0.8
ATG4B-225ENST00000494465 HIST1H4AP62805 103 aaKnown RBP10.07□□□□□ -0.8
ATG4B-225ENST00000494465 ANAPC13Q9BS18 74 aa10.07□□□□□ -0.8
ATG4B-225ENST00000494465 CXCL6P80162 114 aa10.05□□□□□ -0.8
ATG4B-225ENST00000494465 LCE6AA0A183 80 aa10.04□□□□□ -0.8
ATG4B-225ENST00000494465 CRYGAP11844 174 aa10.04□□□□□ -0.8
ATG4B-225ENST00000494465 ZNF861PO60384 105 aa10.03□□□□□ -0.8
ATG4B-225ENST00000494465 SCXQ7RTU7 201 aa10.03□□□□□ -0.8
ATG4B-225ENST00000494465 NREPQ16612 68 aa10.03□□□□□ -0.8
ATG4B-225ENST00000494465 LINC00483Q53H64 154 aa10.02□□□□□ -0.81
ATG4B-225ENST00000494465 LRP1BQ9NZR2 4599 aa10.01□□□□□ -0.81
ATG4B-225ENST00000494465 PKHD1P08F94 4074 aa10□□□□□ -0.81
ATG4B-225ENST00000494465 IGLV7-43P04211 117 aa9.99□□□□□ -0.81
ATG4B-225ENST00000494465 ZNF706Q9Y5V0 76 aaPredicted RBP9.97□□□□□ -0.81
ATG4B-225ENST00000494465 RYR2Q92736 4967 aa9.95□□□□□ -0.82
ATG4B-225ENST00000494465 BPY2O14599 106 aa9.94□□□□□ -0.82
ATG4B-225ENST00000494465 SMIM20Q8N5G0 67 aa9.94□□□□□ -0.82
ATG4B-225ENST00000494465 ATOX1O00244 68 aa9.93□□□□□ -0.82
ATG4B-225ENST00000494465 A0A087WSZ3 146 aa9.93□□□□□ -0.82
ATG4B-225ENST00000494465 IGLV9-49A0A0B4J1Y8 123 aa9.93□□□□□ -0.82
ATG4B-225ENST00000494465 LINC00336Q6ZUF6 198 aa9.93□□□□□ -0.82
ATG4B-225ENST00000494465 Q8N9L7 120 aa9.93□□□□□ -0.82
ATG4B-225ENST00000494465 ANAPC11Q9NYG5 84 aa9.93□□□□□ -0.82
ATG4B-225ENST00000494465 KMT2CQ8NEZ4 4911 aaKnown RBP9.92□□□□□ -0.82
ATG4B-225ENST00000494465 IGKV4-1P06312 121 aa9.91□□□□□ -0.82
ATG4B-225ENST00000494465 CCDC179H3BU77 68 aa9.9□□□□□ -0.82
ATG4B-225ENST00000494465 C9orf153Q5TBE3 101 aa9.89□□□□□ -0.83
ATG4B-225ENST00000494465 VPS13BQ7Z7G8 4022 aa9.89□□□□□ -0.83
ATG4B-225ENST00000494465 A0A1B0GVY2 172 aa9.89□□□□□ -0.83
ATG4B-225ENST00000494465 DYNC1H1Q14204 4646 aaKnown RBP9.88□□□□□ -0.83
ATG4B-225ENST00000494465 DSCR10P59022 87 aa9.88□□□□□ -0.83
ATG4B-225ENST00000494465 RPL37AP61513 92 aaKnown RBP9.88□□□□□ -0.83
ATG4B-225ENST00000494465 MOBPQ13875 183 aa9.86□□□□□ -0.83
ATG4B-225ENST00000494465 COX7CP15954 63 aa9.83□□□□□ -0.84
ATG4B-225ENST00000494465 DEFB116Q30KQ4 102 aa9.83□□□□□ -0.84
ATG4B-225ENST00000494465 SERP2Q8N6R1 65 aa9.82□□□□□ -0.84
ATG4B-225ENST00000494465 UQCRQO14949 82 aa9.81□□□□□ -0.84
ATG4B-225ENST00000494465 K7EQZ3 153 aa9.81□□□□□ -0.84
ATG4B-225ENST00000494465 LINC00472Q9H8W2 130 aa9.81□□□□□ -0.84
ATG4B-225ENST00000494465 HRCT1Q6UXD1 115 aa9.78□□□□□ -0.84
ATG4B-225ENST00000494465 APOBP04114 4563 aaKnown RBP9.78□□□□□ -0.84
ATG4B-225ENST00000494465 C5orf47Q569G3 176 aa9.78□□□□□ -0.84
ATG4B-225ENST00000494465 Q96NJ1 140 aa9.75□□□□□ -0.85
ATG4B-225ENST00000494465 A0A087X002 238 aa9.74□□□□□ -0.85
ATG4B-225ENST00000494465 TRAV7A0A075B6U4 112 aa9.74□□□□□ -0.85
ATG4B-225ENST00000494465 KRTAP1-4P0C5Y4 121 aa9.73□□□□□ -0.85
ATG4B-225ENST00000494465 KRTAP13-2Q52LG2 175 aa9.72□□□□□ -0.85
ATG4B-225ENST00000494465 SSBP3-AS1Q7Z2R9 100 aa9.72□□□□□ -0.85
ATG4B-225ENST00000494465 FAM229BQ4G0N7 80 aa9.71□□□□□ -0.86
ATG4B-225ENST00000494465 A8MWP4 228 aa9.7□□□□□ -0.86
ATG4B-225ENST00000494465 PRR15Q8IV56 129 aa9.69□□□□□ -0.86
ATG4B-225ENST00000494465 OCR1Q9BZK8 76 aa9.69□□□□□ -0.86
ATG4B-225ENST00000494465 CYSTM1Q9H1C7 97 aa9.68□□□□□ -0.86
ATG4B-225ENST00000494465 HCG22E2RYF7 251 aa9.68□□□□□ -0.86
ATG4B-225ENST00000494465 RYR3Q15413 4870 aa9.68□□□□□ -0.86
ATG4B-225ENST00000494465 J3KT08 172 aa9.67□□□□□ -0.86
ATG4B-225ENST00000494465 CD164Q04900 197 aa9.67□□□□□ -0.86
ATG4B-225ENST00000494465 FAT1Q14517 4588 aa9.67□□□□□ -0.86
ATG4B-225ENST00000494465 SMR3BP02814 79 aaPredicted RBP9.67□□□□□ -0.86
ATG4B-225ENST00000494465 KRTAP29-1A8MX34 341 aaPredicted RBP9.63□□□□□ -0.87
ATG4B-225ENST00000494465 KRTAP10-4P60372 401 aaPredicted RBP9.63□□□□□ -0.87
ATG4B-225ENST00000494465 SPINK6Q6UWN8 80 aa9.63□□□□□ -0.87
ATG4B-225ENST00000494465 C20orf197Q8N268 126 aa9.62□□□□□ -0.87
ATG4B-225ENST00000494465 WFDC13Q8IUB5 93 aa9.61□□□□□ -0.87
ATG4B-225ENST00000494465 PLA2G1BP04054 148 aaKnown RBP9.61□□□□□ -0.87
ATG4B-225ENST00000494465 MMP24-AS1A0A0U1RRL7 71 aa9.58□□□□□ -0.88
ATG4B-225ENST00000494465 NDUFB1O75438 58 aa9.58□□□□□ -0.88
ATG4B-225ENST00000494465 ASB16-AS1Q495Z4 193 aa9.58□□□□□ -0.88
ATG4B-225ENST00000494465 CASC2Q6XLA1 102 aa9.57□□□□□ -0.88
ATG4B-225ENST00000494465 KLKP1Q107X0 134 aa9.57□□□□□ -0.88
ATG4B-225ENST00000494465 A0A1B0GVX0 72 aa9.55□□□□□ -0.88
ATG4B-225ENST00000494465 SEC61GP60059 68 aa9.55□□□□□ -0.88
ATG4B-225ENST00000494465 Q5XG85 94 aa9.55□□□□□ -0.88
ATG4B-225ENST00000494465 SNURFQ9Y675 71 aa9.55□□□□□ -0.88
ATG4B-225ENST00000494465 TMEM254Q8TBM7 123 aa9.53□□□□□ -0.88
ATG4B-225ENST00000494465 TYMSOSQ8TAI1 123 aa9.53□□□□□ -0.88
ATG4B-225ENST00000494465 C8orf17Q9NRJ1 99 aa9.52□□□□□ -0.89
ATG4B-225ENST00000494465 IGHV6-1A0A0B4J1U7 121 aa9.51□□□□□ -0.89
ATG4B-225ENST00000494465 hDV103S1A0JD37 113 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms