RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 HSD52Q0P140 79 aa5.94□□□□□ -1.46
TRAPPC12-222ENST00000493792 Q6ZQY7 126 aa5.94□□□□□ -1.46
TRAPPC12-222ENST00000493792 UQCR10Q9UDW1 63 aa5.94□□□□□ -1.46
TRAPPC12-222ENST00000493792 IGLV5-48A0A075B6I7 105 aa5.93□□□□□ -1.46
TRAPPC12-222ENST00000493792 F8WEM9 126 aa5.93□□□□□ -1.46
TRAPPC12-222ENST00000493792 LINC01547P58512 204 aaPredicted RBP5.93□□□□□ -1.46
TRAPPC12-222ENST00000493792 SNCGO76070 127 aa5.92□□□□□ -1.46
TRAPPC12-222ENST00000493792 SMIM29Q86T20 159 aa5.92□□□□□ -1.46
TRAPPC12-222ENST00000493792 Q8N377 158 aa5.92□□□□□ -1.46
TRAPPC12-222ENST00000493792 PRO1933Q9H354 126 aa5.92□□□□□ -1.46
TRAPPC12-222ENST00000493792 PRO1854Q9UHT4 67 aa5.92□□□□□ -1.46
TRAPPC12-222ENST00000493792 H0YGX0 51 aa5.9□□□□□ -1.46
TRAPPC12-222ENST00000493792 RPS29P62273 56 aaKnown RBP5.9□□□□□ -1.46
TRAPPC12-222ENST00000493792 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.9□□□□□ -1.46
TRAPPC12-222ENST00000493792 FP248Q71RG6 208 aaPredicted RBP5.9□□□□□ -1.46
TRAPPC12-222ENST00000493792 CDIP1Q9H305 208 aa5.9□□□□□ -1.46
TRAPPC12-222ENST00000493792 MUC17Q685J3 4493 aa5.9□□□□□ -1.47
TRAPPC12-222ENST00000493792 A0A0G2JQZ4 141 aa5.89□□□□□ -1.47
TRAPPC12-222ENST00000493792 K7ERJ3 54 aa5.89□□□□□ -1.47
TRAPPC12-222ENST00000493792 PSMB2P49721 201 aa5.89□□□□□ -1.47
TRAPPC12-222ENST00000493792 LIMD2Q9BT23 127 aa5.89□□□□□ -1.47
TRAPPC12-222ENST00000493792 SNHG12Q9BXW3 62 aa5.89□□□□□ -1.47
TRAPPC12-222ENST00000493792 TPRXLQ17RH7 258 aa5.87□□□□□ -1.47
TRAPPC12-222ENST00000493792 CRCT1Q9UGL9 99 aa5.87□□□□□ -1.47
TRAPPC12-222ENST00000493792 TRIAP1O43715 76 aa5.86□□□□□ -1.47
TRAPPC12-222ENST00000493792 CD164Q04900 197 aa5.86□□□□□ -1.47
TRAPPC12-222ENST00000493792 FAM218AQ96MZ4 157 aa5.86□□□□□ -1.47
TRAPPC12-222ENST00000493792 LOC100996750A0A140TA64 210 aa5.85□□□□□ -1.47
TRAPPC12-222ENST00000493792 SMIM6P0DI80 62 aa5.85□□□□□ -1.47
TRAPPC12-222ENST00000493792 PPDPFLQ8WWR9 84 aa5.85□□□□□ -1.47
TRAPPC12-222ENST00000493792 CLEC2BQ92478 149 aa5.85□□□□□ -1.47
TRAPPC12-222ENST00000493792 KRTAP4-6Q9BYQ5 205 aa5.85□□□□□ -1.47
TRAPPC12-222ENST00000493792 COX6CP09669 75 aa5.84□□□□□ -1.47
TRAPPC12-222ENST00000493792 FABP2P12104 132 aa5.84□□□□□ -1.47
TRAPPC12-222ENST00000493792 OCIAD2Q56VL3 154 aa5.84□□□□□ -1.47
TRAPPC12-222ENST00000493792 Q6JHZ5 121 aa5.84□□□□□ -1.47
TRAPPC12-222ENST00000493792 H3BUT2 72 aa5.83□□□□□ -1.48
TRAPPC12-222ENST00000493792 DNAL4O96015 105 aa5.83□□□□□ -1.48
TRAPPC12-222ENST00000493792 A0A1B0GX51 115 aa5.82□□□□□ -1.48
TRAPPC12-222ENST00000493792 GHRHP01286 108 aa5.82□□□□□ -1.48
TRAPPC12-222ENST00000493792 SCGB1C2P0DMR2 95 aa5.82□□□□□ -1.48
TRAPPC12-222ENST00000493792 KRTAP13-3Q3SY46 172 aa5.82□□□□□ -1.48
TRAPPC12-222ENST00000493792 IGFL1Q6UW32 110 aa5.82□□□□□ -1.48
TRAPPC12-222ENST00000493792 M0R143 59 aa5.81□□□□□ -1.48
TRAPPC12-222ENST00000493792 TCL1BO95988 128 aa5.81□□□□□ -1.48
TRAPPC12-222ENST00000493792 IGLV8-61A0A075B6I0 122 aa5.8□□□□□ -1.48
TRAPPC12-222ENST00000493792 NDUFV3P56181 108 aaKnown RBP5.8□□□□□ -1.48
TRAPPC12-222ENST00000493792 TSTD3H0UI37 97 aa5.79□□□□□ -1.48
TRAPPC12-222ENST00000493792 A0A1B0GV72 72 aa5.78□□□□□ -1.48
TRAPPC12-222ENST00000493792 LOC105371267A0A1B0GV96 52 aa5.78□□□□□ -1.48
TRAPPC12-222ENST00000493792 H3BMG7 143 aa5.78□□□□□ -1.48
TRAPPC12-222ENST00000493792 ORMDL1Q9P0S3 153 aa5.78□□□□□ -1.48
TRAPPC12-222ENST00000493792 TRBV7-7A0A0K0K1E9 115 aa5.77□□□□□ -1.49
TRAPPC12-222ENST00000493792 C9orf92A6NGG3 77 aa5.77□□□□□ -1.49
TRAPPC12-222ENST00000493792 BATFQ16520 125 aa5.77□□□□□ -1.49
TRAPPC12-222ENST00000493792 C1orf195Q5TG92 126 aa5.77□□□□□ -1.49
TRAPPC12-222ENST00000493792 Q5XG85 94 aa5.77□□□□□ -1.49
TRAPPC12-222ENST00000493792 NAA38Q9BRA0 125 aaKnown RBP5.76□□□□□ -1.49
TRAPPC12-222ENST00000493792 H3BQ85 93 aa5.75□□□□□ -1.49
TRAPPC12-222ENST00000493792 TMEM256-PLSCR3K7ERE1 68 aa5.74□□□□□ -1.49
TRAPPC12-222ENST00000493792 LST1O00453 97 aa5.73□□□□□ -1.49
TRAPPC12-222ENST00000493792 TRACP01848 142 aa5.73□□□□□ -1.49
TRAPPC12-222ENST00000493792 TEN1Q86WV5 123 aa5.73□□□□□ -1.49
TRAPPC12-222ENST00000493792 SEC61BP60468 96 aaKnown RBP5.72□□□□□ -1.49
TRAPPC12-222ENST00000493792 XP32Q5T750 250 aa5.72□□□□□ -1.49
TRAPPC12-222ENST00000493792 ANKRD29Q8N6D5 301 aa5.72□□□□□ -1.49
TRAPPC12-222ENST00000493792 SS18L2Q9UHA2 77 aa5.72□□□□□ -1.49
TRAPPC12-222ENST00000493792 A0A087WSZ3 146 aa5.71□□□□□ -1.5
TRAPPC12-222ENST00000493792 SMCPP49901 116 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC12-222ENST00000493792 ATXN8Q156A1 80 aa5.7□□□□□ -1.5
TRAPPC12-222ENST00000493792 ASB16-AS1Q495Z4 193 aa5.7□□□□□ -1.5
TRAPPC12-222ENST00000493792 BAALC-AS2P0C853 105 aa5.69□□□□□ -1.5
TRAPPC12-222ENST00000493792 UBE2V1Q13404 147 aa5.69□□□□□ -1.5
TRAPPC12-222ENST00000493792 LCE2CQ5TA81 110 aa5.69□□□□□ -1.5
TRAPPC12-222ENST00000493792 Q6Q795 121 aa5.69□□□□□ -1.5
TRAPPC12-222ENST00000493792 LYRM7Q5U5X0 104 aa5.68□□□□□ -1.5
TRAPPC12-222ENST00000493792 VPS25Q9BRG1 176 aa5.68□□□□□ -1.5
TRAPPC12-222ENST00000493792 A0A1W2PNM2 257 aa5.67□□□□□ -1.5
TRAPPC12-222ENST00000493792 CCKP06307 115 aa5.66□□□□□ -1.5
TRAPPC12-222ENST00000493792 RBM3P98179 157 aaKnown RBP5.66□□□□□ -1.5
TRAPPC12-222ENST00000493792 KRTAP4-1Q9BYQ7 146 aa5.66□□□□□ -1.5
TRAPPC12-222ENST00000493792 DSCR8Q96T75 97 aa5.65□□□□□ -1.5
TRAPPC12-222ENST00000493792 TRBV7-4A0A0J9YYF1 115 aa5.64□□□□□ -1.51
TRAPPC12-222ENST00000493792 PCOTHQ58A44 107 aa5.64□□□□□ -1.51
TRAPPC12-222ENST00000493792 OBSCN-AS1Q96MR7 158 aa5.64□□□□□ -1.51
TRAPPC12-222ENST00000493792 SIGMAR1Q99720 223 aa5.64□□□□□ -1.51
TRAPPC12-222ENST00000493792 TRBV20-1A0A075B6N2 111 aa5.63□□□□□ -1.51
TRAPPC12-222ENST00000493792 C9orf118A6NHY6 69 aa5.62□□□□□ -1.51
TRAPPC12-222ENST00000493792 C9JAW5 83 aa5.62□□□□□ -1.51
TRAPPC12-222ENST00000493792 IGKV4-1P06312 121 aa5.61□□□□□ -1.51
TRAPPC12-222ENST00000493792 RPL37P61927 97 aaKnown RBP5.61□□□□□ -1.51
TRAPPC12-222ENST00000493792 A0A1W2PPM0 123 aa5.6□□□□□ -1.51
TRAPPC12-222ENST00000493792 JMJD7-PLA2G4BH0Y9G9 81 aa5.6□□□□□ -1.51
TRAPPC12-222ENST00000493792 TAX1BP3O14907 124 aa5.6□□□□□ -1.51
TRAPPC12-222ENST00000493792 DEFB116Q30KQ4 102 aa5.6□□□□□ -1.51
TRAPPC12-222ENST00000493792 Q96NJ1 140 aa5.6□□□□□ -1.51
TRAPPC12-222ENST00000493792 LORP23490 312 aaPredicted RBP5.59□□□□□ -1.51
TRAPPC12-222ENST00000493792 DSCR10P59022 87 aa5.58□□□□□ -1.52
TRAPPC12-222ENST00000493792 MTURNQ8N3F0 131 aa5.57□□□□□ -1.52
TRAPPC12-222ENST00000493792 C14orf132Q9NPU4 83 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms