RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 FXYD2P54710 66 aa7.27□□□□□ -1.25
GPNMB-213ENST00000492512 C9orf118A6NHY6 69 aa7.26□□□□□ -1.25
GPNMB-213ENST00000492512 SPRR1BP22528 89 aa7.26□□□□□ -1.25
GPNMB-213ENST00000492512 A0A1B0GWB2 263 aa7.25□□□□□ -1.25
GPNMB-213ENST00000492512 NDUFC2O95298 119 aa7.25□□□□□ -1.25
GPNMB-213ENST00000492512 Q6ZVH6 145 aa7.25□□□□□ -1.25
GPNMB-213ENST00000492512 LAMTOR3Q9UHA4 124 aa7.25□□□□□ -1.25
GPNMB-213ENST00000492512 A0A0J9YXY3 114 aa7.24□□□□□ -1.25
GPNMB-213ENST00000492512 TIMM17BO60830 172 aa7.24□□□□□ -1.25
GPNMB-213ENST00000492512 CD164Q04900 197 aa7.24□□□□□ -1.25
GPNMB-213ENST00000492512 VAMP3Q15836 100 aa7.24□□□□□ -1.25
GPNMB-213ENST00000492512 NHP2Q9NX24 153 aaKnown RBP7.24□□□□□ -1.25
GPNMB-213ENST00000492512 H7C2G1 150 aa7.23□□□□□ -1.25
GPNMB-213ENST00000492512 UBE2V1Q13404 147 aa7.23□□□□□ -1.25
GPNMB-213ENST00000492512 CBY1Q9Y3M2 126 aa7.22□□□□□ -1.25
GPNMB-213ENST00000492512 SSPOA2VEC9 5147 aa7.22□□□□□ -1.25
GPNMB-213ENST00000492512 C1orf195Q5TG92 126 aa7.21□□□□□ -1.26
GPNMB-213ENST00000492512 Q6Q795 121 aa7.21□□□□□ -1.26
GPNMB-213ENST00000492512 GTF2H5Q6ZYL4 71 aa7.21□□□□□ -1.26
GPNMB-213ENST00000492512 COPS9Q8WXC6 57 aa7.21□□□□□ -1.26
GPNMB-213ENST00000492512 RAB37Q96AX2 223 aa7.21□□□□□ -1.26
GPNMB-213ENST00000492512 SPANXDQ9BXN6 97 aa7.21□□□□□ -1.26
GPNMB-213ENST00000492512 SPANXCQ9NY87 97 aa7.21□□□□□ -1.26
GPNMB-213ENST00000492512 DHRS4-AS1Q9P1J3 65 aa7.21□□□□□ -1.26
GPNMB-213ENST00000492512 A0A1W2PPM0 123 aa7.2□□□□□ -1.26
GPNMB-213ENST00000492512 H3BUT2 72 aa7.2□□□□□ -1.26
GPNMB-213ENST00000492512 CFC1P0CG37 223 aa7.2□□□□□ -1.26
GPNMB-213ENST00000492512 FABP2P12104 132 aa7.2□□□□□ -1.26
GPNMB-213ENST00000492512 IFITM1P13164 125 aa7.2□□□□□ -1.26
GPNMB-213ENST00000492512 NPC2P61916 151 aa7.19□□□□□ -1.26
GPNMB-213ENST00000492512 Q1RN00 199 aa7.19□□□□□ -1.26
GPNMB-213ENST00000492512 Q5XG85 94 aa7.19□□□□□ -1.26
GPNMB-213ENST00000492512 LITAFQ99732 161 aa7.19□□□□□ -1.26
GPNMB-213ENST00000492512 USH2AO75445 5202 aa7.19□□□□□ -1.26
GPNMB-213ENST00000492512 K7ERJ3 54 aa7.18□□□□□ -1.26
GPNMB-213ENST00000492512 SOSTDC1Q6X4U4 206 aa7.18□□□□□ -1.26
GPNMB-213ENST00000492512 K7EP34 96 aa7.17□□□□□ -1.26
GPNMB-213ENST00000492512 EIF4EBP3O60516 100 aaPredicted RBP7.17□□□□□ -1.26
GPNMB-213ENST00000492512 LYRM7Q5U5X0 104 aa7.17□□□□□ -1.26
GPNMB-213ENST00000492512 MUSTN1Q8IVN3 82 aa7.17□□□□□ -1.26
GPNMB-213ENST00000492512 DEFB105AQ8NG35 78 aa7.17□□□□□ -1.26
GPNMB-213ENST00000492512 A0A0B4J2C4 111 aa7.16□□□□□ -1.26
GPNMB-213ENST00000492512 OR13C6PQ8NH95 151 aa7.16□□□□□ -1.26
GPNMB-213ENST00000492512 PRO1854Q9UHT4 67 aa7.16□□□□□ -1.26
GPNMB-213ENST00000492512 SPCS1Q9Y6A9 102 aa7.16□□□□□ -1.26
GPNMB-213ENST00000492512 A4D1N5 150 aa7.15□□□□□ -1.26
GPNMB-213ENST00000492512 SMIM29Q86T20 159 aa7.15□□□□□ -1.26
GPNMB-213ENST00000492512 ADAMTSL4-AS1Q5T5F5 129 aa7.14□□□□□ -1.27
GPNMB-213ENST00000492512 TEX49A0A1B0GTD5 131 aa7.13□□□□□ -1.27
GPNMB-213ENST00000492512 NAA38Q9BRA0 125 aaKnown RBP7.13□□□□□ -1.27
GPNMB-213ENST00000492512 KRTAP9-8Q9BYQ0 159 aa7.13□□□□□ -1.27
GPNMB-213ENST00000492512 FCGBPQ9Y6R7 5405 aaPredicted RBP7.12□□□□□ -1.27
GPNMB-213ENST00000492512 COX7BP24311 80 aa7.12□□□□□ -1.27
GPNMB-213ENST00000492512 A0A0G2JQZ4 141 aa7.11□□□□□ -1.27
GPNMB-213ENST00000492512 ELOF1P60002 83 aaKnown RBP7.11□□□□□ -1.27
GPNMB-213ENST00000492512 LINC00308Q8TCZ7 52 aa7.11□□□□□ -1.27
GPNMB-213ENST00000492512 TCL1BO95988 128 aa7.1□□□□□ -1.27
GPNMB-213ENST00000492512 ATP11AUNQ6ZP68 121 aa7.1□□□□□ -1.27
GPNMB-213ENST00000492512 TRBV20-1A0A075B6N2 111 aa7.09□□□□□ -1.27
GPNMB-213ENST00000492512 C6orf99Q4VX62 202 aa7.09□□□□□ -1.27
GPNMB-213ENST00000492512 F8W1H4 67 aa7.06□□□□□ -1.28
GPNMB-213ENST00000492512 COX6CP09669 75 aa7.06□□□□□ -1.28
GPNMB-213ENST00000492512 SCGB1C2P0DMR2 95 aa7.06□□□□□ -1.28
GPNMB-213ENST00000492512 PSMB2P49721 201 aa7.06□□□□□ -1.28
GPNMB-213ENST00000492512 KRTAP19-1Q8IUB9 90 aa7.06□□□□□ -1.28
GPNMB-213ENST00000492512 TRAV13-2A0A0B4J235 113 aa7.04□□□□□ -1.28
GPNMB-213ENST00000492512 Q75L30 129 aa7.04□□□□□ -1.28
GPNMB-213ENST00000492512 IGLV5-48A0A075B6I7 105 aa7.03□□□□□ -1.28
GPNMB-213ENST00000492512 OBSCN-AS1Q96MR7 158 aa7.03□□□□□ -1.28
GPNMB-213ENST00000492512 TRBV7-6A0A0J9YX20 115 aa7.02□□□□□ -1.29
GPNMB-213ENST00000492512 H3BMG7 143 aa7.02□□□□□ -1.29
GPNMB-213ENST00000492512 ATXN8Q156A1 80 aa7.01□□□□□ -1.29
GPNMB-213ENST00000492512 K7ERU9 68 aa7□□□□□ -1.29
GPNMB-213ENST00000492512 TRIAP1O43715 76 aa7□□□□□ -1.29
GPNMB-213ENST00000492512 PRO0461Q9UI25 63 aa7□□□□□ -1.29
GPNMB-213ENST00000492512 LCE2BO14633 110 aa6.99□□□□□ -1.29
GPNMB-213ENST00000492512 MT2AP02795 61 aa6.99□□□□□ -1.29
GPNMB-213ENST00000492512 OCIAD2Q56VL3 154 aa6.99□□□□□ -1.29
GPNMB-213ENST00000492512 F8WEM9 126 aa6.97□□□□□ -1.29
GPNMB-213ENST00000492512 J3QR89 54 aa6.96□□□□□ -1.3
GPNMB-213ENST00000492512 LST1O00453 97 aa6.96□□□□□ -1.3
GPNMB-213ENST00000492512 Q96NJ1 140 aa6.95□□□□□ -1.3
GPNMB-213ENST00000492512 H0YGX0 51 aa6.94□□□□□ -1.3
GPNMB-213ENST00000492512 TRBV7-7A0A0K0K1E9 115 aa6.93□□□□□ -1.3
GPNMB-213ENST00000492512 C9JAW5 83 aa6.93□□□□□ -1.3
GPNMB-213ENST00000492512 H3BT86 120 aa6.93□□□□□ -1.3
GPNMB-213ENST00000492512 TRACP01848 142 aa6.93□□□□□ -1.3
GPNMB-213ENST00000492512 MT1FP04733 61 aa6.93□□□□□ -1.3
GPNMB-213ENST00000492512 SMCPP49901 116 aaPredicted RBP6.92□□□□□ -1.3
GPNMB-213ENST00000492512 KRTAP10-10P60014 251 aa6.92□□□□□ -1.3
GPNMB-213ENST00000492512 ETDBQ3ZM63 59 aa6.92□□□□□ -1.3
GPNMB-213ENST00000492512 TEN1Q86WV5 123 aa6.92□□□□□ -1.3
GPNMB-213ENST00000492512 KRTAP9-3Q9BYQ3 159 aa6.92□□□□□ -1.3
GPNMB-213ENST00000492512 Q6JHZ5 121 aa6.91□□□□□ -1.3
GPNMB-213ENST00000492512 MTURNQ8N3F0 131 aa6.91□□□□□ -1.3
GPNMB-213ENST00000492512 ANKRD29Q8N6D5 301 aa6.91□□□□□ -1.3
GPNMB-213ENST00000492512 SMIM11BQ8TCY0 68 aa6.91□□□□□ -1.3
GPNMB-213ENST00000492512 PPDPFLQ8WWR9 84 aa6.91□□□□□ -1.3
GPNMB-213ENST00000492512 CLEC2BQ92478 149 aa6.91□□□□□ -1.3
GPNMB-213ENST00000492512 LINC00846Q9NV44 126 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms