RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 C9orf129Q5T035 196 aaKnown RBP8.41□□□□□ -1.06
HDAC3-213ENST00000492506 A0A0U1RRA0 63 aa8.4□□□□□ -1.06
HDAC3-213ENST00000492506 LINC01547P58512 204 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-213ENST00000492506 Q6ZQT0 140 aa8.4□□□□□ -1.06
HDAC3-213ENST00000492506 PANO1I0J062 215 aa8.39□□□□□ -1.07
HDAC3-213ENST00000492506 CDC42SE2Q9NRR3 84 aa8.39□□□□□ -1.07
HDAC3-213ENST00000492506 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.39□□□□□ -1.07
HDAC3-213ENST00000492506 A0A0U1RQV1 116 aa8.38□□□□□ -1.07
HDAC3-213ENST00000492506 TMEM254Q8TBM7 123 aa8.38□□□□□ -1.07
HDAC3-213ENST00000492506 PRYO14603 147 aa8.37□□□□□ -1.07
HDAC3-213ENST00000492506 NREPQ16612 68 aa8.37□□□□□ -1.07
HDAC3-213ENST00000492506 C14orf177Q52M58 125 aa8.37□□□□□ -1.07
HDAC3-213ENST00000492506 Q6ZVQ6 151 aa8.37□□□□□ -1.07
HDAC3-213ENST00000492506 UBE2L6O14933 153 aa8.36□□□□□ -1.07
HDAC3-213ENST00000492506 Q1T7F1 81 aa8.36□□□□□ -1.07
HDAC3-213ENST00000492506 C9orf163Q8N9P6 203 aa8.36□□□□□ -1.07
HDAC3-213ENST00000492506 SNURFQ9Y675 71 aa8.35□□□□□ -1.07
HDAC3-213ENST00000492506 LINC00474Q9P2X8 69 aa8.34□□□□□ -1.07
HDAC3-213ENST00000492506 A0A087WZ39 114 aa8.33□□□□□ -1.08
HDAC3-213ENST00000492506 COX17Q14061 63 aa8.33□□□□□ -1.08
HDAC3-213ENST00000492506 NTM-AS1Q6ZSK4 140 aa8.33□□□□□ -1.08
HDAC3-213ENST00000492506 SLPIP03973 132 aa8.32□□□□□ -1.08
HDAC3-213ENST00000492506 KRTAP26-1Q6PEX3 210 aa8.31□□□□□ -1.08
HDAC3-213ENST00000492506 BPY2O14599 106 aa8.3□□□□□ -1.08
HDAC3-213ENST00000492506 LINC00575Q6W349 94 aa8.29□□□□□ -1.08
HDAC3-213ENST00000492506 Q8IZM0 81 aa8.29□□□□□ -1.08
HDAC3-213ENST00000492506 MRPL55Q7Z7F7 128 aaKnown RBP8.28□□□□□ -1.08
HDAC3-213ENST00000492506 TRBV6-8A0A0A6YYG3 113 aa8.27□□□□□ -1.09
HDAC3-213ENST00000492506 MPLKIPQ8TAP9 179 aa8.27□□□□□ -1.09
HDAC3-213ENST00000492506 PRR34Q9NV39 138 aa8.27□□□□□ -1.09
HDAC3-213ENST00000492506 TOMM7Q9P0U1 55 aa8.27□□□□□ -1.09
HDAC3-213ENST00000492506 LPAP08519 4548 aa8.27□□□□□ -1.09
HDAC3-213ENST00000492506 IGHV3OR16-9A0A0B4J2B5 98 aa8.26□□□□□ -1.09
HDAC3-213ENST00000492506 A0A1B0GW54 56 aa8.26□□□□□ -1.09
HDAC3-213ENST00000492506 ANGP03950 147 aaKnown RBP8.26□□□□□ -1.09
HDAC3-213ENST00000492506 UBE2BP63146 152 aa8.26□□□□□ -1.09
HDAC3-213ENST00000492506 hDV103S1A0JD37 113 aa8.25□□□□□ -1.09
HDAC3-213ENST00000492506 CNBPP62633 177 aaKnown RBP8.25□□□□□ -1.09
HDAC3-213ENST00000492506 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-213ENST00000492506 CHTF8P0CG12 524 aa8.24□□□□□ -1.09
HDAC3-213ENST00000492506 SPACA4Q8TDM5 124 aa8.24□□□□□ -1.09
HDAC3-213ENST00000492506 KRTAP10-8P60410 259 aa8.23□□□□□ -1.09
HDAC3-213ENST00000492506 OCR1Q9BZK8 76 aa8.23□□□□□ -1.09
HDAC3-213ENST00000492506 PLAC8Q9NZF1 115 aa8.23□□□□□ -1.09
HDAC3-213ENST00000492506 NDUFS5O43920 106 aa8.22□□□□□ -1.09
HDAC3-213ENST00000492506 CLPSL2Q6UWE3 100 aa8.22□□□□□ -1.09
HDAC3-213ENST00000492506 CYP4F30PQ9H0H9 118 aa8.22□□□□□ -1.09
HDAC3-213ENST00000492506 COX7BP24311 80 aa8.21□□□□□ -1.1
HDAC3-213ENST00000492506 FAM229BQ4G0N7 80 aa8.21□□□□□ -1.1
HDAC3-213ENST00000492506 LINC00269Q8N2A0 174 aa8.21□□□□□ -1.1
HDAC3-213ENST00000492506 NDUFB1O75438 58 aa8.2□□□□□ -1.1
HDAC3-213ENST00000492506 PRR3P79522 188 aaKnown RBP8.19□□□□□ -1.1
HDAC3-213ENST00000492506 C6orf99Q4VX62 202 aa8.19□□□□□ -1.1
HDAC3-213ENST00000492506 IGLV10-54A0A075B6I4 117 aa8.18□□□□□ -1.1
HDAC3-213ENST00000492506 UBE2AP49459 152 aa8.18□□□□□ -1.1
HDAC3-213ENST00000492506 KTN1-AS1Q86SY8 53 aa8.18□□□□□ -1.1
HDAC3-213ENST00000492506 REG3AQ06141 175 aa8.17□□□□□ -1.1
HDAC3-213ENST00000492506 C7orf33Q8WU49 177 aa8.17□□□□□ -1.1
HDAC3-213ENST00000492506 MUC2Q02817 5179 aa8.16□□□□□ -1.1
HDAC3-213ENST00000492506 IGKV4-1P06312 121 aa8.16□□□□□ -1.1
HDAC3-213ENST00000492506 ELOF1P60002 83 aaKnown RBP8.15□□□□□ -1.1
HDAC3-213ENST00000492506 LINC00959A0A1B0GUT2 108 aa8.14□□□□□ -1.11
HDAC3-213ENST00000492506 A0A1B0GUV1 79 aa8.13□□□□□ -1.11
HDAC3-213ENST00000492506 IGLV6-57P01721 117 aa8.13□□□□□ -1.11
HDAC3-213ENST00000492506 SPINK6Q6UWN8 80 aa8.13□□□□□ -1.11
HDAC3-213ENST00000492506 Q6ZRP5 223 aa8.13□□□□□ -1.11
HDAC3-213ENST00000492506 C15orf56Q8N910 161 aa8.13□□□□□ -1.11
HDAC3-213ENST00000492506 DIRC1Q969H9 104 aa8.13□□□□□ -1.11
HDAC3-213ENST00000492506 LIMD2Q9BT23 127 aa8.13□□□□□ -1.11
HDAC3-213ENST00000492506 IGLV4-60A0A075B6I1 120 aa8.12□□□□□ -1.11
HDAC3-213ENST00000492506 CD164L2Q6UWJ8 174 aa8.12□□□□□ -1.11
HDAC3-213ENST00000492506 VPREB1P12018 145 aa8.11□□□□□ -1.11
HDAC3-213ENST00000492506 REG3GQ6UW15 175 aa8.11□□□□□ -1.11
HDAC3-213ENST00000492506 Q6ZQY7 126 aa8.11□□□□□ -1.11
HDAC3-213ENST00000492506 TRAV22A0A0B4J277 110 aa8.1□□□□□ -1.11
HDAC3-213ENST00000492506 IGKV2-24A0A0C4DH68 120 aa8.1□□□□□ -1.11
HDAC3-213ENST00000492506 C1orf64Q8NEQ6 169 aa8.1□□□□□ -1.11
HDAC3-213ENST00000492506 ZCCHC13Q8WW36 166 aaKnown RBP8.1□□□□□ -1.11
HDAC3-213ENST00000492506 KRTAP9-2Q9BYQ4 174 aa8.1□□□□□ -1.11
HDAC3-213ENST00000492506 ATP11AUNQ6ZP68 121 aa8.09□□□□□ -1.11
HDAC3-213ENST00000492506 HIGD2BQ4VC39 106 aa8.08□□□□□ -1.12
HDAC3-213ENST00000492506 HIGD2AQ9BW72 106 aa8.08□□□□□ -1.12
HDAC3-213ENST00000492506 A0A096LNI7 61 aa8.07□□□□□ -1.12
HDAC3-213ENST00000492506 ETDCA0A1B0GVM5 59 aa8.07□□□□□ -1.12
HDAC3-213ENST00000492506 H3BPC8 53 aa8.06□□□□□ -1.12
HDAC3-213ENST00000492506 PHF5AQ7RTV0 110 aaKnown RBP8.06□□□□□ -1.12
HDAC3-213ENST00000492506 GVQW2A0A096LPI5 108 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-213ENST00000492506 SPANXA2-OT1Q8N9U9 137 aa8.05□□□□□ -1.12
HDAC3-213ENST00000492506 IGKV3OR2-268A0A0C4DH90 116 aa8.04□□□□□ -1.12
HDAC3-213ENST00000492506 SYCNQ0VAF6 134 aa8.04□□□□□ -1.12
HDAC3-213ENST00000492506 KIAA0087Q14695 138 aa8.04□□□□□ -1.12
HDAC3-213ENST00000492506 Q9BRP9 147 aa8.03□□□□□ -1.12
HDAC3-213ENST00000492506 FAT4Q6V0I7 4981 aa8.03□□□□□ -1.12
HDAC3-213ENST00000492506 RBM12B-AS1Q9P1G2 102 aa8.02□□□□□ -1.13
HDAC3-213ENST00000492506 M0R378 163 aa8□□□□□ -1.13
HDAC3-213ENST00000492506 ZNF73O43830 326 aaPredicted RBP8□□□□□ -1.13
HDAC3-213ENST00000492506 CHCHD10Q8WYQ3 142 aaPredicted RBP8□□□□□ -1.13
HDAC3-213ENST00000492506 MP68P56378 58 aa7.99□□□□□ -1.13
HDAC3-213ENST00000492506 Q5VV11 94 aa7.99□□□□□ -1.13
HDAC3-213ENST00000492506 Q75L30 129 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 239.4 ms