RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 LINC00575Q6W349 94 aa10.53□□□□□ -0.72
SREBF1-216ENST00000490796 CRCT1Q9UGL9 99 aa10.53□□□□□ -0.72
SREBF1-216ENST00000490796 Q6JHZ5 121 aa10.52□□□□□ -0.73
SREBF1-216ENST00000490796 Q6ZQY7 126 aa10.52□□□□□ -0.73
SREBF1-216ENST00000490796 FSIP2Q5CZC0 6907 aa10.52□□□□□ -0.73
SREBF1-216ENST00000490796 S100A2P29034 98 aa10.5□□□□□ -0.73
SREBF1-216ENST00000490796 CLEC2BQ92478 149 aa10.49□□□□□ -0.73
SREBF1-216ENST00000490796 TRBV7-7A0A0K0K1E9 115 aa10.46□□□□□ -0.73
SREBF1-216ENST00000490796 OCIAD2Q56VL3 154 aa10.46□□□□□ -0.73
SREBF1-216ENST00000490796 IGFL1Q6UW32 110 aa10.45□□□□□ -0.74
SREBF1-216ENST00000490796 SNHG12Q9BXW3 62 aa10.45□□□□□ -0.74
SREBF1-216ENST00000490796 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.44□□□□□ -0.74
SREBF1-216ENST00000490796 KRTAP10-6P60371 365 aaPredicted RBP10.43□□□□□ -0.74
SREBF1-216ENST00000490796 BVES-AS1Q5T3Y7 98 aa10.43□□□□□ -0.74
SREBF1-216ENST00000490796 HIST1H2BLQ99880 126 aa10.43□□□□□ -0.74
SREBF1-216ENST00000490796 HIST3H2BBQ8N257 126 aa10.42□□□□□ -0.74
SREBF1-216ENST00000490796 LORP23490 312 aaPredicted RBP10.41□□□□□ -0.74
SREBF1-216ENST00000490796 ATP11AUNQ6ZP68 121 aa10.41□□□□□ -0.74
SREBF1-216ENST00000490796 PPDPFLQ8WWR9 84 aa10.41□□□□□ -0.74
SREBF1-216ENST00000490796 OBSCN-AS1Q96MR7 158 aa10.41□□□□□ -0.74
SREBF1-216ENST00000490796 HIST1H4GQ99525 98 aa10.41□□□□□ -0.74
SREBF1-216ENST00000490796 C12orf57Q99622 126 aa10.41□□□□□ -0.74
SREBF1-216ENST00000490796 SCGB1D1O95968 90 aa10.39□□□□□ -0.75
SREBF1-216ENST00000490796 LST1O00453 97 aa10.38□□□□□ -0.75
SREBF1-216ENST00000490796 S100A6P06703 90 aa10.38□□□□□ -0.75
SREBF1-216ENST00000490796 SNCGO76070 127 aa10.37□□□□□ -0.75
SREBF1-216ENST00000490796 Q6Q795 121 aa10.37□□□□□ -0.75
SREBF1-216ENST00000490796 H3BUT2 72 aa10.35□□□□□ -0.75
SREBF1-216ENST00000490796 Q75L30 129 aa10.35□□□□□ -0.75
SREBF1-216ENST00000490796 SS18L2Q9UHA2 77 aa10.33□□□□□ -0.76
SREBF1-216ENST00000490796 Q96NJ1 140 aa10.32□□□□□ -0.76
SREBF1-216ENST00000490796 RAB37Q96AX2 223 aa10.31□□□□□ -0.76
SREBF1-216ENST00000490796 FLGP20930 4061 aaPredicted RBP10.31□□□□□ -0.76
SREBF1-216ENST00000490796 COX8AP10176 69 aa10.29□□□□□ -0.76
SREBF1-216ENST00000490796 H0YGX0 51 aa10.27□□□□□ -0.77
SREBF1-216ENST00000490796 TEN1Q86WV5 123 aa10.25□□□□□ -0.77
SREBF1-216ENST00000490796 DLEU1O43261 78 aa10.24□□□□□ -0.77
SREBF1-216ENST00000490796 CFC1P0CG37 223 aa10.24□□□□□ -0.77
SREBF1-216ENST00000490796 NDUFV3P56181 108 aaKnown RBP10.24□□□□□ -0.77
SREBF1-216ENST00000490796 GHRHP01286 108 aa10.23□□□□□ -0.77
SREBF1-216ENST00000490796 C14orf144Q96I85 54 aa10.21□□□□□ -0.77
SREBF1-216ENST00000490796 A0A087WSZ3 146 aa10.2□□□□□ -0.78
SREBF1-216ENST00000490796 A0A0B4J2C4 111 aa10.2□□□□□ -0.78
SREBF1-216ENST00000490796 TRBV20-1A0A075B6N2 111 aa10.19□□□□□ -0.78
SREBF1-216ENST00000490796 H3BMG7 143 aa10.19□□□□□ -0.78
SREBF1-216ENST00000490796 FABP2P12104 132 aa10.19□□□□□ -0.78
SREBF1-216ENST00000490796 S100A1P23297 94 aa10.19□□□□□ -0.78
SREBF1-216ENST00000490796 C20orf166-AS1Q96NR2 134 aa10.18□□□□□ -0.78
SREBF1-216ENST00000490796 FAM218AQ96MZ4 157 aa10.17□□□□□ -0.78
SREBF1-216ENST00000490796 HIGD1BQ9P298 99 aa10.17□□□□□ -0.78
SREBF1-216ENST00000490796 A8MUU9 505 aa10.16□□□□□ -0.78
SREBF1-216ENST00000490796 SPATA45Q537H7 98 aa10.16□□□□□ -0.78
SREBF1-216ENST00000490796 PAM16Q9Y3D7 125 aa10.16□□□□□ -0.78
SREBF1-216ENST00000490796 A0A1B0GX51 115 aa10.15□□□□□ -0.78
SREBF1-216ENST00000490796 SIGMAR1Q99720 223 aa10.14□□□□□ -0.79
SREBF1-216ENST00000490796 TMEM238LA0A1B0GVL6 79 aa10.13□□□□□ -0.79
SREBF1-216ENST00000490796 A6NJY4 79 aa10.13□□□□□ -0.79
SREBF1-216ENST00000490796 DSCR10P59022 87 aa10.12□□□□□ -0.79
SREBF1-216ENST00000490796 VAMP8Q9BV40 100 aa10.12□□□□□ -0.79
SREBF1-216ENST00000490796 PRO1854Q9UHT4 67 aa10.12□□□□□ -0.79
SREBF1-216ENST00000490796 CEND1Q8N111 149 aa10.1□□□□□ -0.79
SREBF1-216ENST00000490796 C2orf91Q6ZV80 131 aa10.08□□□□□ -0.8
SREBF1-216ENST00000490796 DNAL4O96015 105 aa10.07□□□□□ -0.8
SREBF1-216ENST00000490796 LINC00313P59037 77 aa10.07□□□□□ -0.8
SREBF1-216ENST00000490796 ANKRD29Q8N6D5 301 aa10.07□□□□□ -0.8
SREBF1-216ENST00000490796 A0A1W2PNM2 257 aa10.06□□□□□ -0.8
SREBF1-216ENST00000490796 FAM236DA0A1B0GTK5 79 aa10.05□□□□□ -0.8
SREBF1-216ENST00000490796 IGKV4-1P06312 121 aa10.05□□□□□ -0.8
SREBF1-216ENST00000490796 FAM236CP0DP71 79 aa10.05□□□□□ -0.8
SREBF1-216ENST00000490796 TRIAP1O43715 76 aa10.04□□□□□ -0.8
SREBF1-216ENST00000490796 A0A1B0GV72 72 aa10.03□□□□□ -0.8
SREBF1-216ENST00000490796 H3BQ85 93 aa10.03□□□□□ -0.8
SREBF1-216ENST00000490796 ORMDL1Q9P0S3 153 aa10.03□□□□□ -0.8
SREBF1-216ENST00000490796 FXYD2P54710 66 aa10.02□□□□□ -0.81
SREBF1-216ENST00000490796 TRBV7-4A0A0J9YYF1 115 aa10.01□□□□□ -0.81
SREBF1-216ENST00000490796 PSMB2P49721 201 aa10.01□□□□□ -0.81
SREBF1-216ENST00000490796 COX6CP09669 75 aa9.98□□□□□ -0.81
SREBF1-216ENST00000490796 TMEM256-PLSCR3K7ERE1 68 aa9.97□□□□□ -0.81
SREBF1-216ENST00000490796 TRACP01848 142 aa9.97□□□□□ -0.81
SREBF1-216ENST00000490796 RBM12B-AS1Q9P1G2 102 aa9.97□□□□□ -0.81
SREBF1-216ENST00000490796 DEFB116Q30KQ4 102 aa9.96□□□□□ -0.82
SREBF1-216ENST00000490796 KRTAP9-8Q9BYQ0 159 aa9.96□□□□□ -0.82
SREBF1-216ENST00000490796 CCKP06307 115 aa9.95□□□□□ -0.82
SREBF1-216ENST00000490796 IGHV6-1A0A0B4J1U7 121 aa9.94□□□□□ -0.82
SREBF1-216ENST00000490796 KRTAP16-1A8MUX0 517 aa9.93□□□□□ -0.82
SREBF1-216ENST00000490796 HSD52Q0P140 79 aa9.92□□□□□ -0.82
SREBF1-216ENST00000490796 K7ERJ3 54 aa9.91□□□□□ -0.82
SREBF1-216ENST00000490796 LINC00472Q9H8W2 130 aa9.91□□□□□ -0.82
SREBF1-216ENST00000490796 NOTCH2NLQ7Z3S9 236 aa9.9□□□□□ -0.82
SREBF1-216ENST00000490796 VPS25Q9BRG1 176 aa9.9□□□□□ -0.82
SREBF1-216ENST00000490796 USH2AO75445 5202 aa9.88□□□□□ -0.83
SREBF1-216ENST00000490796 UBE2V1Q13404 147 aa9.88□□□□□ -0.83
SREBF1-216ENST00000490796 C8orf87E5RJ46 101 aa9.85□□□□□ -0.83
SREBF1-216ENST00000490796 HRES1P13985 223 aa9.85□□□□□ -0.83
SREBF1-216ENST00000490796 SCGB1C2P0DMR2 95 aa9.84□□□□□ -0.83
SREBF1-216ENST00000490796 RBM3P98179 157 aaKnown RBP9.83□□□□□ -0.84
SREBF1-216ENST00000490796 MTURNQ8N3F0 131 aa9.83□□□□□ -0.84
SREBF1-216ENST00000490796 DSCR8Q96T75 97 aa9.83□□□□□ -0.84
SREBF1-216ENST00000490796 SSPOA2VEC9 5147 aa9.82□□□□□ -0.84
SREBF1-216ENST00000490796 A0A1B0GVX0 72 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms