RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 C14orf144Q96I85 54 aa9.61□□□□□ -0.87
SEC13-218ENST00000490283 VAMP8Q9BV40 100 aa9.61□□□□□ -0.87
SEC13-218ENST00000490283 A0A0G2JQZ4 141 aa9.6□□□□□ -0.87
SEC13-218ENST00000490283 TCL1BO95988 128 aa9.6□□□□□ -0.87
SEC13-218ENST00000490283 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.6□□□□□ -0.87
SEC13-218ENST00000490283 C9orf92A6NGG3 77 aa9.59□□□□□ -0.87
SEC13-218ENST00000490283 SNCGO76070 127 aa9.59□□□□□ -0.87
SEC13-218ENST00000490283 Q6JHZ5 121 aa9.59□□□□□ -0.87
SEC13-218ENST00000490283 HIGD1BQ9P298 99 aa9.59□□□□□ -0.87
SEC13-218ENST00000490283 PPDPFLQ8WWR9 84 aa9.57□□□□□ -0.88
SEC13-218ENST00000490283 C1orf195Q5TG92 126 aa9.56□□□□□ -0.88
SEC13-218ENST00000490283 SNHG12Q9BXW3 62 aa9.56□□□□□ -0.88
SEC13-218ENST00000490283 CFC1BP0CG36 223 aa9.55□□□□□ -0.88
SEC13-218ENST00000490283 CFC1P0CG37 223 aa9.55□□□□□ -0.88
SEC13-218ENST00000490283 LCE2AQ5TA79 106 aaPredicted RBP9.55□□□□□ -0.88
SEC13-218ENST00000490283 CLEC2BQ92478 149 aa9.55□□□□□ -0.88
SEC13-218ENST00000490283 FAT4Q6V0I7 4981 aa9.54□□□□□ -0.88
SEC13-218ENST00000490283 A0A0B4J2C4 111 aa9.54□□□□□ -0.88
SEC13-218ENST00000490283 LCE2BO14633 110 aa9.54□□□□□ -0.88
SEC13-218ENST00000490283 OCIAD2Q56VL3 154 aa9.54□□□□□ -0.88
SEC13-218ENST00000490283 IGLV8-61A0A075B6I0 122 aa9.53□□□□□ -0.88
SEC13-218ENST00000490283 TMEM238LA0A1B0GVL6 79 aa9.53□□□□□ -0.88
SEC13-218ENST00000490283 A6NJY4 79 aa9.53□□□□□ -0.88
SEC13-218ENST00000490283 H0YGX0 51 aa9.52□□□□□ -0.89
SEC13-218ENST00000490283 C2orf91Q6ZV80 131 aa9.51□□□□□ -0.89
SEC13-218ENST00000490283 IGFL1Q6UW32 110 aa9.5□□□□□ -0.89
SEC13-218ENST00000490283 CEND1Q8N111 149 aa9.5□□□□□ -0.89
SEC13-218ENST00000490283 KRTAP4-1Q9BYQ7 146 aa9.5□□□□□ -0.89
SEC13-218ENST00000490283 TRBV7-7A0A0K0K1E9 115 aa9.49□□□□□ -0.89
SEC13-218ENST00000490283 SMCPP49901 116 aaPredicted RBP9.49□□□□□ -0.89
SEC13-218ENST00000490283 PCOTHQ58A44 107 aa9.49□□□□□ -0.89
SEC13-218ENST00000490283 GHRHP01286 108 aa9.47□□□□□ -0.89
SEC13-218ENST00000490283 PRO1854Q9UHT4 67 aa9.47□□□□□ -0.89
SEC13-218ENST00000490283 H3BUT2 72 aa9.44□□□□□ -0.9
SEC13-218ENST00000490283 A0A1B0GX51 115 aa9.43□□□□□ -0.9
SEC13-218ENST00000490283 FXYD2P54710 66 aa9.42□□□□□ -0.9
SEC13-218ENST00000490283 FAM218AQ96MZ4 157 aa9.42□□□□□ -0.9
SEC13-218ENST00000490283 NDUFV3P56181 108 aaKnown RBP9.41□□□□□ -0.9
SEC13-218ENST00000490283 SS18L2Q9UHA2 77 aa9.41□□□□□ -0.9
SEC13-218ENST00000490283 LST1O00453 97 aa9.4□□□□□ -0.9
SEC13-218ENST00000490283 RPL37P61927 97 aaKnown RBP9.4□□□□□ -0.9
SEC13-218ENST00000490283 HSD52Q0P140 79 aa9.4□□□□□ -0.9
SEC13-218ENST00000490283 PYY3Q5JQD4 70 aa9.4□□□□□ -0.9
SEC13-218ENST00000490283 FABP2P12104 132 aa9.39□□□□□ -0.91
SEC13-218ENST00000490283 TRIAP1O43715 76 aa9.37□□□□□ -0.91
SEC13-218ENST00000490283 DNAL4O96015 105 aa9.37□□□□□ -0.91
SEC13-218ENST00000490283 Q6Q795 121 aa9.37□□□□□ -0.91
SEC13-218ENST00000490283 TEN1Q86WV5 123 aa9.37□□□□□ -0.91
SEC13-218ENST00000490283 H3BMG7 143 aa9.36□□□□□ -0.91
SEC13-218ENST00000490283 PSMB2P49721 201 aa9.36□□□□□ -0.91
SEC13-218ENST00000490283 TMA7Q9Y2S6 64 aaKnown RBP9.36□□□□□ -0.91
SEC13-218ENST00000490283 KRTAP9-2Q9BYQ4 174 aa9.35□□□□□ -0.91
SEC13-218ENST00000490283 COX6CP09669 75 aa9.34□□□□□ -0.91
SEC13-218ENST00000490283 H3BQ85 93 aa9.33□□□□□ -0.92
SEC13-218ENST00000490283 UQCR10Q9UDW1 63 aa9.33□□□□□ -0.92
SEC13-218ENST00000490283 OBSCN-AS1Q96MR7 158 aa9.32□□□□□ -0.92
SEC13-218ENST00000490283 K7ERJ3 54 aa9.31□□□□□ -0.92
SEC13-218ENST00000490283 ORMDL1Q9P0S3 153 aa9.31□□□□□ -0.92
SEC13-218ENST00000490283 A0A087WSZ3 146 aa9.3□□□□□ -0.92
SEC13-218ENST00000490283 ATP11AUNQ6ZP68 121 aa9.28□□□□□ -0.92
SEC13-218ENST00000490283 TMEM256-PLSCR3K7ERE1 68 aa9.26□□□□□ -0.93
SEC13-218ENST00000490283 Q75L30 129 aa9.26□□□□□ -0.93
SEC13-218ENST00000490283 LCE2CQ5TA81 110 aa9.25□□□□□ -0.93
SEC13-218ENST00000490283 ANKRD29Q8N6D5 301 aa9.25□□□□□ -0.93
SEC13-218ENST00000490283 Q96NJ1 140 aa9.25□□□□□ -0.93
SEC13-218ENST00000490283 COX6B2Q6YFQ2 88 aa9.24□□□□□ -0.93
SEC13-218ENST00000490283 A0A1B0GV72 72 aa9.23□□□□□ -0.93
SEC13-218ENST00000490283 KRTAP19-2Q3LHN2 52 aa9.23□□□□□ -0.93
SEC13-218ENST00000490283 SCGB1C2P0DMR2 95 aa9.22□□□□□ -0.93
SEC13-218ENST00000490283 TRBV7-4A0A0J9YYF1 115 aa9.21□□□□□ -0.94
SEC13-218ENST00000490283 A0A1W2PNM2 257 aa9.21□□□□□ -0.94
SEC13-218ENST00000490283 SIGMAR1Q99720 223 aa9.21□□□□□ -0.94
SEC13-218ENST00000490283 MT1HP80294 61 aa9.19□□□□□ -0.94
SEC13-218ENST00000490283 TRACP01848 142 aa9.18□□□□□ -0.94
SEC13-218ENST00000490283 UBE2V1Q13404 147 aa9.18□□□□□ -0.94
SEC13-218ENST00000490283 CCKP06307 115 aa9.16□□□□□ -0.94
SEC13-218ENST00000490283 IGKV4-1P06312 121 aa9.15□□□□□ -0.94
SEC13-218ENST00000490283 C20orf166-AS1Q96NR2 134 aa9.15□□□□□ -0.94
SEC13-218ENST00000490283 M0R2T5 61 aa9.14□□□□□ -0.95
SEC13-218ENST00000490283 DSCR10P59022 87 aa9.13□□□□□ -0.95
SEC13-218ENST00000490283 A8MUU9 505 aa9.12□□□□□ -0.95
SEC13-218ENST00000490283 M0R143 59 aa9.12□□□□□ -0.95
SEC13-218ENST00000490283 DSCR8Q96T75 97 aa9.12□□□□□ -0.95
SEC13-218ENST00000490283 LINC00313P59037 77 aa9.11□□□□□ -0.95
SEC13-218ENST00000490283 RBM3P98179 157 aaKnown RBP9.11□□□□□ -0.95
SEC13-218ENST00000490283 VPS25Q9BRG1 176 aa9.11□□□□□ -0.95
SEC13-218ENST00000490283 BAALC-AS2P0C853 105 aa9.07□□□□□ -0.96
SEC13-218ENST00000490283 C21orf62-AS1Q17RA5 79 aa9.07□□□□□ -0.96
SEC13-218ENST00000490283 DEFB116Q30KQ4 102 aa9.06□□□□□ -0.96
SEC13-218ENST00000490283 TRBV20-1A0A075B6N2 111 aa9.05□□□□□ -0.96
SEC13-218ENST00000490283 KRTAP9-6A0A140TA67 174 aa9.05□□□□□ -0.96
SEC13-218ENST00000490283 ATXN8Q156A1 80 aa9.05□□□□□ -0.96
SEC13-218ENST00000490283 LINC00472Q9H8W2 130 aa9.05□□□□□ -0.96
SEC13-218ENST00000490283 C9JAW5 83 aa9.04□□□□□ -0.96
SEC13-218ENST00000490283 SMIM6P0DI80 62 aa9.04□□□□□ -0.96
SEC13-218ENST00000490283 IGHV6-1A0A0B4J1U7 121 aa9.03□□□□□ -0.96
SEC13-218ENST00000490283 KRTAP10-6P60371 365 aaPredicted RBP9.02□□□□□ -0.97
SEC13-218ENST00000490283 LORP23490 312 aaPredicted RBP9□□□□□ -0.97
SEC13-218ENST00000490283 LYRM7Q5U5X0 104 aa9□□□□□ -0.97
SEC13-218ENST00000490283 NAA38Q9BRA0 125 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms