RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 PRYO14603 147 aa6.43□□□□□ -1.38
SCAMP4-208ENST00000489554 IGLV7-43P04211 117 aa6.43□□□□□ -1.38
SCAMP4-208ENST00000489554 SPRR1AP35321 89 aa6.43□□□□□ -1.38
SCAMP4-208ENST00000489554 UBE2BP63146 152 aa6.43□□□□□ -1.38
SCAMP4-208ENST00000489554 ELOF1P60002 83 aaKnown RBP6.42□□□□□ -1.38
SCAMP4-208ENST00000489554 KRTAP10-8P60410 259 aa6.42□□□□□ -1.38
SCAMP4-208ENST00000489554 PDE6GP18545 87 aa6.41□□□□□ -1.38
SCAMP4-208ENST00000489554 SCGB1A1P11684 91 aa6.4□□□□□ -1.38
SCAMP4-208ENST00000489554 OBSCN-AS1Q96MR7 158 aa6.4□□□□□ -1.38
SCAMP4-208ENST00000489554 DHRS4-AS1Q9P1J3 65 aa6.4□□□□□ -1.38
SCAMP4-208ENST00000489554 KRTAP13-1Q8IUC0 172 aa6.39□□□□□ -1.39
SCAMP4-208ENST00000489554 H0Y9J4 135 aa6.38□□□□□ -1.39
SCAMP4-208ENST00000489554 ETDCA0A1B0GVM5 59 aa6.37□□□□□ -1.39
SCAMP4-208ENST00000489554 B5MCH6 92 aa6.37□□□□□ -1.39
SCAMP4-208ENST00000489554 BCE1O60756 84 aa6.36□□□□□ -1.39
SCAMP4-208ENST00000489554 RBM3P98179 157 aaKnown RBP6.36□□□□□ -1.39
SCAMP4-208ENST00000489554 CDIP1Q9H305 208 aa6.36□□□□□ -1.39
SCAMP4-208ENST00000489554 LAMTOR3Q9UHA4 124 aa6.36□□□□□ -1.39
SCAMP4-208ENST00000489554 Q6ZQY7 126 aa6.35□□□□□ -1.39
SCAMP4-208ENST00000489554 DSCR8Q96T75 97 aa6.35□□□□□ -1.39
SCAMP4-208ENST00000489554 Q9BRP9 147 aa6.35□□□□□ -1.39
SCAMP4-208ENST00000489554 ZNF861PO60384 105 aa6.34□□□□□ -1.39
SCAMP4-208ENST00000489554 CCKP06307 115 aa6.34□□□□□ -1.39
SCAMP4-208ENST00000489554 PRLHP81277 87 aa6.34□□□□□ -1.39
SCAMP4-208ENST00000489554 GAGE2AQ6NT46 116 aa6.34□□□□□ -1.39
SCAMP4-208ENST00000489554 Q6ZRX8 168 aa6.34□□□□□ -1.39
SCAMP4-208ENST00000489554 FAM19A1Q7Z5A9 133 aa6.33□□□□□ -1.4
SCAMP4-208ENST00000489554 LINC00643Q86TS7 51 aa6.33□□□□□ -1.4
SCAMP4-208ENST00000489554 PRR26Q8N8Z3 221 aa6.33□□□□□ -1.4
SCAMP4-208ENST00000489554 SMCR5Q8TEV8 140 aa6.33□□□□□ -1.4
SCAMP4-208ENST00000489554 LOC110117498A0A087WWA1 95 aa6.32□□□□□ -1.4
SCAMP4-208ENST00000489554 KRTAP1-4P0C5Y4 121 aa6.32□□□□□ -1.4
SCAMP4-208ENST00000489554 Q6Q795 121 aa6.32□□□□□ -1.4
SCAMP4-208ENST00000489554 IMUPQ9GZP8 106 aa6.32□□□□□ -1.4
SCAMP4-208ENST00000489554 C14orf132Q9NPU4 83 aa6.32□□□□□ -1.4
SCAMP4-208ENST00000489554 ERC2-IT1O76042 136 aa6.31□□□□□ -1.4
SCAMP4-208ENST00000489554 UBR4Q5T4S7 5183 aa6.3□□□□□ -1.4
SCAMP4-208ENST00000489554 NDUFV3P56181 108 aaKnown RBP6.3□□□□□ -1.4
SCAMP4-208ENST00000489554 A0A1B0GW54 56 aa6.29□□□□□ -1.4
SCAMP4-208ENST00000489554 PCP4P48539 62 aa6.29□□□□□ -1.4
SCAMP4-208ENST00000489554 UBE2AP49459 152 aa6.29□□□□□ -1.4
SCAMP4-208ENST00000489554 UBL5Q9BZL1 73 aa6.28□□□□□ -1.4
SCAMP4-208ENST00000489554 MT-ATP8P03928 68 aa6.27□□□□□ -1.41
SCAMP4-208ENST00000489554 LINC01547P58512 204 aaPredicted RBP6.27□□□□□ -1.41
SCAMP4-208ENST00000489554 ATP5EP2Q5VTU8 51 aa6.27□□□□□ -1.41
SCAMP4-208ENST00000489554 HIGD2AQ9BW72 106 aa6.27□□□□□ -1.41
SCAMP4-208ENST00000489554 Q6ZQT0 140 aa6.26□□□□□ -1.41
SCAMP4-208ENST00000489554 ST20-AS1Q8NBB2 130 aa6.26□□□□□ -1.41
SCAMP4-208ENST00000489554 IGLV5-48A0A075B6I7 105 aa6.25□□□□□ -1.41
SCAMP4-208ENST00000489554 TRBV7-7A0A0K0K1E9 115 aa6.25□□□□□ -1.41
SCAMP4-208ENST00000489554 LRP2P98164 4655 aa6.24□□□□□ -1.41
SCAMP4-208ENST00000489554 TRBV7-4A0A0J9YYF1 115 aa6.24□□□□□ -1.41
SCAMP4-208ENST00000489554 F8WEM9 126 aa6.24□□□□□ -1.41
SCAMP4-208ENST00000489554 CRYGAP11844 174 aa6.24□□□□□ -1.41
SCAMP4-208ENST00000489554 Q6JHZ5 121 aa6.24□□□□□ -1.41
SCAMP4-208ENST00000489554 Q8N377 158 aa6.23□□□□□ -1.41
SCAMP4-208ENST00000489554 DEFB105AQ8NG35 78 aa6.23□□□□□ -1.41
SCAMP4-208ENST00000489554 SPRR4Q96PI1 79 aa6.23□□□□□ -1.41
SCAMP4-208ENST00000489554 LINC00846Q9NV44 126 aa6.23□□□□□ -1.41
SCAMP4-208ENST00000489554 A0A087X002 238 aa6.21□□□□□ -1.42
SCAMP4-208ENST00000489554 SPRR1BP22528 89 aa6.21□□□□□ -1.42
SCAMP4-208ENST00000489554 FAM229BQ4G0N7 80 aa6.21□□□□□ -1.42
SCAMP4-208ENST00000489554 LINC00483Q53H64 154 aa6.21□□□□□ -1.42
SCAMP4-208ENST00000489554 TYMSOSQ8TAI1 123 aa6.21□□□□□ -1.42
SCAMP4-208ENST00000489554 A0A1B0GV72 72 aa6.2□□□□□ -1.42
SCAMP4-208ENST00000489554 ANAPC11Q9NYG5 84 aa6.2□□□□□ -1.42
SCAMP4-208ENST00000489554 SMIM29Q86T20 159 aa6.19□□□□□ -1.42
SCAMP4-208ENST00000489554 ZNF706Q9Y5V0 76 aaPredicted RBP6.18□□□□□ -1.42
SCAMP4-208ENST00000489554 CXCL6P80162 114 aa6.17□□□□□ -1.42
SCAMP4-208ENST00000489554 PRR4Q16378 134 aa6.16□□□□□ -1.42
SCAMP4-208ENST00000489554 KRTAP13-2Q52LG2 175 aa6.16□□□□□ -1.42
SCAMP4-208ENST00000489554 C3orf22Q8N5N4 141 aa6.16□□□□□ -1.42
SCAMP4-208ENST00000489554 IGLV8-61A0A075B6I0 122 aa6.15□□□□□ -1.42
SCAMP4-208ENST00000489554 NREPQ16612 68 aa6.15□□□□□ -1.42
SCAMP4-208ENST00000489554 ANAPC13Q9BS18 74 aa6.15□□□□□ -1.42
SCAMP4-208ENST00000489554 Q6ZVQ6 151 aa6.14□□□□□ -1.43
SCAMP4-208ENST00000489554 LINC00304Q8N9R0 145 aa6.14□□□□□ -1.43
SCAMP4-208ENST00000489554 Q8NBF4 154 aa6.13□□□□□ -1.43
SCAMP4-208ENST00000489554 LPAP08519 4548 aa6.12□□□□□ -1.43
SCAMP4-208ENST00000489554 IGKV3D-7A0A0C4DH55 119 aa6.12□□□□□ -1.43
SCAMP4-208ENST00000489554 ATOX1O00244 68 aa6.12□□□□□ -1.43
SCAMP4-208ENST00000489554 HIST1H4AP62805 103 aaKnown RBP6.11□□□□□ -1.43
SCAMP4-208ENST00000489554 RNF213Q63HN8 5207 aa6.11□□□□□ -1.43
SCAMP4-208ENST00000489554 FAM236AA0A1B0GUQ0 79 aa6.1□□□□□ -1.43
SCAMP4-208ENST00000489554 FAM236BA0A1B0GV22 79 aa6.1□□□□□ -1.43
SCAMP4-208ENST00000489554 IGLV9-49A0A0B4J1Y8 123 aa6.09□□□□□ -1.43
SCAMP4-208ENST00000489554 SMIM20Q8N5G0 67 aa6.09□□□□□ -1.43
SCAMP4-208ENST00000489554 A0A0G2JQZ4 141 aa6.08□□□□□ -1.44
SCAMP4-208ENST00000489554 BPY2O14599 106 aa6.08□□□□□ -1.44
SCAMP4-208ENST00000489554 MOBPQ13875 183 aa6.08□□□□□ -1.44
SCAMP4-208ENST00000489554 SPAG11AQ6PDA7 123 aa6.08□□□□□ -1.44
SCAMP4-208ENST00000489554 A0A1W2PNM2 257 aa6.07□□□□□ -1.44
SCAMP4-208ENST00000489554 IGFL1Q6UW32 110 aa6.06□□□□□ -1.44
SCAMP4-208ENST00000489554 C4orf48Q5BLP8 95 aa6.05□□□□□ -1.44
SCAMP4-208ENST00000489554 RETNLBQ9BQ08 111 aa6.05□□□□□ -1.44
SCAMP4-208ENST00000489554 C9orf153Q5TBE3 101 aa6.04□□□□□ -1.44
SCAMP4-208ENST00000489554 SSBP3-AS1Q7Z2R9 100 aa6.04□□□□□ -1.44
SCAMP4-208ENST00000489554 SS18L2Q9UHA2 77 aa6.03□□□□□ -1.44
SCAMP4-208ENST00000489554 IGLV7-46A0A075B6I9 117 aa6.02□□□□□ -1.45
SCAMP4-208ENST00000489554 UQCRQO14949 82 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms