RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 Q6ZQY7 126 aa6.45□□□□□ -1.38
CCHCR1-215ENST00000488920 C12orf57Q99622 126 aa6.45□□□□□ -1.38
CCHCR1-215ENST00000488920 LCE2CQ5TA81 110 aa6.44□□□□□ -1.38
CCHCR1-215ENST00000488920 TCL1BO95988 128 aa6.43□□□□□ -1.38
CCHCR1-215ENST00000488920 HIST1H4GQ99525 98 aa6.43□□□□□ -1.38
CCHCR1-215ENST00000488920 KRTAP19-2Q3LHN2 52 aa6.41□□□□□ -1.38
CCHCR1-215ENST00000488920 COX8AP10176 69 aa6.4□□□□□ -1.38
CCHCR1-215ENST00000488920 OCIAD2Q56VL3 154 aa6.4□□□□□ -1.38
CCHCR1-215ENST00000488920 Q6JHZ5 121 aa6.39□□□□□ -1.39
CCHCR1-215ENST00000488920 IGFL1Q6UW32 110 aa6.39□□□□□ -1.39
CCHCR1-215ENST00000488920 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.39□□□□□ -1.39
CCHCR1-215ENST00000488920 TRBV7-7A0A0K0K1E9 115 aa6.38□□□□□ -1.39
CCHCR1-215ENST00000488920 RPL37P61927 97 aaKnown RBP6.38□□□□□ -1.39
CCHCR1-215ENST00000488920 BVES-AS1Q5T3Y7 98 aa6.38□□□□□ -1.39
CCHCR1-215ENST00000488920 CLEC2BQ92478 149 aa6.38□□□□□ -1.39
CCHCR1-215ENST00000488920 SNHG12Q9BXW3 62 aa6.38□□□□□ -1.39
CCHCR1-215ENST00000488920 C14orf144Q96I85 54 aa6.37□□□□□ -1.39
CCHCR1-215ENST00000488920 DLEU1O43261 78 aa6.36□□□□□ -1.39
CCHCR1-215ENST00000488920 CFC1BP0CG36 223 aa6.36□□□□□ -1.39
CCHCR1-215ENST00000488920 CFC1P0CG37 223 aa6.36□□□□□ -1.39
CCHCR1-215ENST00000488920 MT1HP80294 61 aa6.36□□□□□ -1.39
CCHCR1-215ENST00000488920 H3BUT2 72 aa6.35□□□□□ -1.39
CCHCR1-215ENST00000488920 RAB37Q96AX2 223 aa6.35□□□□□ -1.39
CCHCR1-215ENST00000488920 LCE2DQ5TA82 110 aaPredicted RBP6.34□□□□□ -1.39
CCHCR1-215ENST00000488920 PPDPFLQ8WWR9 84 aa6.34□□□□□ -1.39
CCHCR1-215ENST00000488920 PAM16Q9Y3D7 125 aa6.34□□□□□ -1.39
CCHCR1-215ENST00000488920 SPATA45Q537H7 98 aa6.33□□□□□ -1.4
CCHCR1-215ENST00000488920 OBSCN-AS1Q96MR7 158 aa6.32□□□□□ -1.4
CCHCR1-215ENST00000488920 HIGD1BQ9P298 99 aa6.32□□□□□ -1.4
CCHCR1-215ENST00000488920 FAM218AQ96MZ4 157 aa6.31□□□□□ -1.4
CCHCR1-215ENST00000488920 A0A0B4J2C4 111 aa6.3□□□□□ -1.4
CCHCR1-215ENST00000488920 H0YGX0 51 aa6.3□□□□□ -1.4
CCHCR1-215ENST00000488920 LST1O00453 97 aa6.3□□□□□ -1.4
CCHCR1-215ENST00000488920 SNCGO76070 127 aa6.3□□□□□ -1.4
CCHCR1-215ENST00000488920 C2orf91Q6ZV80 131 aa6.3□□□□□ -1.4
CCHCR1-215ENST00000488920 VAMP8Q9BV40 100 aa6.3□□□□□ -1.4
CCHCR1-215ENST00000488920 NDUFV3P56181 108 aaKnown RBP6.28□□□□□ -1.4
CCHCR1-215ENST00000488920 COX6B2Q6YFQ2 88 aa6.28□□□□□ -1.4
CCHCR1-215ENST00000488920 CEND1Q8N111 149 aa6.28□□□□□ -1.4
CCHCR1-215ENST00000488920 FSIP2Q5CZC0 6907 aa6.28□□□□□ -1.4
CCHCR1-215ENST00000488920 SMIM6P0DI80 62 aa6.27□□□□□ -1.41
CCHCR1-215ENST00000488920 PRO1854Q9UHT4 67 aa6.27□□□□□ -1.41
CCHCR1-215ENST00000488920 M0R2T5 61 aa6.26□□□□□ -1.41
CCHCR1-215ENST00000488920 ATP11AUNQ6ZP68 121 aa6.26□□□□□ -1.41
CCHCR1-215ENST00000488920 Q75L30 129 aa6.26□□□□□ -1.41
CCHCR1-215ENST00000488920 FABP2P12104 132 aa6.25□□□□□ -1.41
CCHCR1-215ENST00000488920 KRTAP10-6P60371 365 aaPredicted RBP6.25□□□□□ -1.41
CCHCR1-215ENST00000488920 Q6Q795 121 aa6.25□□□□□ -1.41
CCHCR1-215ENST00000488920 TEN1Q86WV5 123 aa6.25□□□□□ -1.41
CCHCR1-215ENST00000488920 Q96NJ1 140 aa6.25□□□□□ -1.41
CCHCR1-215ENST00000488920 TMEM238LA0A1B0GVL6 79 aa6.24□□□□□ -1.41
CCHCR1-215ENST00000488920 A6NJY4 79 aa6.24□□□□□ -1.41
CCHCR1-215ENST00000488920 H3BMG7 143 aa6.24□□□□□ -1.41
CCHCR1-215ENST00000488920 LORP23490 312 aaPredicted RBP6.24□□□□□ -1.41
CCHCR1-215ENST00000488920 FXYD2P54710 66 aa6.24□□□□□ -1.41
CCHCR1-215ENST00000488920 PYY3Q5JQD4 70 aa6.24□□□□□ -1.41
CCHCR1-215ENST00000488920 SS18L2Q9UHA2 77 aa6.24□□□□□ -1.41
CCHCR1-215ENST00000488920 A0A087WSZ3 146 aa6.23□□□□□ -1.41
CCHCR1-215ENST00000488920 CRCT1Q9UGL9 99 aa6.23□□□□□ -1.41
CCHCR1-215ENST00000488920 A0A1B0GX51 115 aa6.22□□□□□ -1.41
CCHCR1-215ENST00000488920 TRIAP1O43715 76 aa6.22□□□□□ -1.41
CCHCR1-215ENST00000488920 GHRHP01286 108 aa6.21□□□□□ -1.42
CCHCR1-215ENST00000488920 FLGP20930 4061 aaPredicted RBP6.2□□□□□ -1.42
CCHCR1-215ENST00000488920 A0A1W2PNM2 257 aa6.19□□□□□ -1.42
CCHCR1-215ENST00000488920 A0A1B0GV72 72 aa6.18□□□□□ -1.42
CCHCR1-215ENST00000488920 K7ERJ3 54 aa6.18□□□□□ -1.42
CCHCR1-215ENST00000488920 PSMB2P49721 201 aa6.18□□□□□ -1.42
CCHCR1-215ENST00000488920 C20orf166-AS1Q96NR2 134 aa6.18□□□□□ -1.42
CCHCR1-215ENST00000488920 A8MUU9 505 aa6.17□□□□□ -1.42
CCHCR1-215ENST00000488920 DSCR10P59022 87 aa6.17□□□□□ -1.42
CCHCR1-215ENST00000488920 HSD52Q0P140 79 aa6.17□□□□□ -1.42
CCHCR1-215ENST00000488920 ANKRD29Q8N6D5 301 aa6.17□□□□□ -1.42
CCHCR1-215ENST00000488920 PCP4L1A6NKN8 68 aa6.16□□□□□ -1.42
CCHCR1-215ENST00000488920 DNAL4O96015 105 aa6.16□□□□□ -1.42
CCHCR1-215ENST00000488920 ORMDL1Q9P0S3 153 aa6.16□□□□□ -1.42
CCHCR1-215ENST00000488920 SIGMAR1Q99720 223 aa6.15□□□□□ -1.42
CCHCR1-215ENST00000488920 TRBV7-4A0A0J9YYF1 115 aa6.13□□□□□ -1.43
CCHCR1-215ENST00000488920 H3BQ85 93 aa6.13□□□□□ -1.43
CCHCR1-215ENST00000488920 IGKV4-1P06312 121 aa6.13□□□□□ -1.43
CCHCR1-215ENST00000488920 COX6CP09669 75 aa6.13□□□□□ -1.43
CCHCR1-215ENST00000488920 TMEM256-PLSCR3K7ERE1 68 aa6.12□□□□□ -1.43
CCHCR1-215ENST00000488920 LINC00313P59037 77 aa6.12□□□□□ -1.43
CCHCR1-215ENST00000488920 DEFB116Q30KQ4 102 aa6.12□□□□□ -1.43
CCHCR1-215ENST00000488920 TSTD3H0UI37 97 aa6.11□□□□□ -1.43
CCHCR1-215ENST00000488920 CCKP06307 115 aa6.1□□□□□ -1.43
CCHCR1-215ENST00000488920 NOTCH2NLQ7Z3S9 236 aa6.1□□□□□ -1.43
CCHCR1-215ENST00000488920 KRTAP3-3Q9BYR6 98 aa6.1□□□□□ -1.43
CCHCR1-215ENST00000488920 KRTAP3-2Q9BYR7 98 aa6.1□□□□□ -1.43
CCHCR1-215ENST00000488920 UQCR10Q9UDW1 63 aa6.1□□□□□ -1.43
CCHCR1-215ENST00000488920 TRBV20-1A0A075B6N2 111 aa6.09□□□□□ -1.43
CCHCR1-215ENST00000488920 KRTAP16-1A8MUX0 517 aa6.08□□□□□ -1.44
CCHCR1-215ENST00000488920 TRACP01848 142 aa6.08□□□□□ -1.44
CCHCR1-215ENST00000488920 SCGB1C2P0DMR2 95 aa6.08□□□□□ -1.44
CCHCR1-215ENST00000488920 UBE2V1Q13404 147 aa6.08□□□□□ -1.44
CCHCR1-215ENST00000488920 LINC00472Q9H8W2 130 aa6.08□□□□□ -1.44
CCHCR1-215ENST00000488920 IGHV6-1A0A0B4J1U7 121 aa6.06□□□□□ -1.44
CCHCR1-215ENST00000488920 VPS25Q9BRG1 176 aa6.06□□□□□ -1.44
CCHCR1-215ENST00000488920 RBM3P98179 157 aaKnown RBP6.04□□□□□ -1.44
CCHCR1-215ENST00000488920 DSCR8Q96T75 97 aa6.03□□□□□ -1.44
CCHCR1-215ENST00000488920 BAALC-AS2P0C853 105 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms